RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 NFRKBQ6P4R8 1299 aa12.44□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 NOSTRINQ8IVI9 506 aa12.44□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 C7orf31Q8N865 590 aa12.44□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 GLG1Q92896 1179 aa12.44□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 LENG9Q96B70 501 aa12.44□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 UIMC1Q96RL1 719 aa12.44□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 BCAS3Q9H6U6 928 aa12.44□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 NOD1Q9Y239 953 aa12.44□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 SAMM50Q9Y512 469 aa12.44□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 VPS37CA5D8V6 355 aaPredicted RBP12.43□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 WDR64B1ANS9 1081 aa12.43□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 H3BRB1 525 aa12.43□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 BACH1O14867 736 aa12.43□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 CHMP2AO43633 222 aa12.43□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 SLC37A4O43826 429 aa12.43□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 NEMFO60524 1076 aa12.43□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 ATP2B1P20020 1258 aa12.43□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 ACTR2P61160 394 aa12.43□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 TLE2Q04725 743 aa12.43□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 CALCRLQ16602 461 aa12.43□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 FAM160B1Q5W0V3 765 aa12.43□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 ZNF746Q6NUN9 644 aaPredicted RBP12.43□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 ANKRD33Q7Z3H0 272 aa12.43□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 POTEDQ86YR6 584 aa12.43□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 FAM126BQ8IXS8 530 aa12.43□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 SMAP1Q8IYB5 467 aaPredicted RBP12.43□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 SLC43A3Q8NBI5 491 aa12.43□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 MBOAT7Q96N66 472 aa12.43□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 TOX2Q96NM4 488 aa12.43□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 RIT2Q99578 217 aa12.43□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 SMARCAD1Q9H4L7 1026 aa12.43□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 TUT1Q9H6E5 874 aaKnown RBP12.43□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 ERAP1Q9NZ08 941 aa12.43□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 GSTTP1A0A1W2PQM5 241 aa12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 KIF28PB7ZC32 967 aa12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 TBX3O15119 743 aa12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 EDIL3O43854 480 aa12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 PSAPP07602 524 aa12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 SUPT20HL2P0C7V6 817 aa12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 U2AF2P26368 475 aaKnown RBP eCLIP12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 SFNP31947 248 aa12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 TRAPPC10P48553 1259 aa12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 CDK7P50613 346 aa12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 JAK3P52333 1124 aa12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 ORC2Q13416 577 aaPredicted RBP12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 BECN1Q14457 450 aa12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 TTC38Q5R3I4 469 aa12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 TRIM50Q86XT4 487 aa12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 SLFN12Q8IYM2 578 aa12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 ETNPPLQ8TBG4 499 aa12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 KAT2BQ92831 832 aa12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 SLC5A5Q92911 643 aa12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 TNPO1Q92973 898 aaKnown RBP12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 FAM20AQ96MK3 541 aa12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 C16orf70Q9BSU1 422 aa12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 PDLIM7Q9NR12 457 aa12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 TMEM39AQ9NV64 488 aa12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 ZMYND8Q9ULU4 1186 aaPredicted RBP12.42□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 GRIN2DO15399 1336 aa12.41□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 LOXHD1Q8IVV2 1947 aa12.41□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 HAS3O00219 553 aa12.41□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 DHX15O43143 795 aaKnown RBP12.41□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 B4GALT4O60513 344 aa12.41□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 LGR5O75473 907 aa12.41□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 SYN1P17600 705 aa12.41□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 MARK3P27448 753 aa12.41□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 MCM7P33993 719 aa12.41□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 MIER3Q7Z3K6 550 aa12.41□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 SESTD1Q86VW0 696 aa12.41□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 CKAP2LQ8IYA6 745 aa12.41□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 CCDC155Q8N6L0 562 aa12.41□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 EVPLQ92817 2033 aa12.41□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 LBHD1Q9BQE6 289 aaPredicted RBP12.41□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 ZNF302Q9NR11 478 aa12.41□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 GTF2IRD1Q9UHL9 959 aa12.41□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 TRPC6Q9Y210 931 aa12.41□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 PCDHA10Q9Y5I2 948 aa12.41□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 ARID2Q68CP9 1835 aa12.41□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 C17orf102A2RUQ5 167 aa12.4□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 PSMD10O75832 226 aa12.4□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 CCNE2O96020 404 aa12.4□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 CD4P01730 458 aa12.4□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 SMIM10L2AP0DMW4 78 aa12.4□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 SMIM10L2BP0DMW5 78 aa12.4□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 GNAT1P11488 350 aa12.4□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 RAG1P15918 1043 aa12.4□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 SLC26A2P50443 739 aa12.4□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 STAT5BP51692 787 aa12.4□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 FAAP100Q0VG06 881 aa12.4□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 PTGISQ16647 500 aa12.4□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 RILPL1Q5EBL4 403 aa12.4□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 PDXDC2PQ6P474 469 aa12.4□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 BRAPQ7Z569 592 aa12.4□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 RDM1Q8NG50 284 aa12.4□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 PPP1R13LQ8WUF5 828 aa12.4□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 UNC45AQ9H3U1 944 aa12.4□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 KCNMB3Q9NPA1 279 aa12.4□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 DISC1Q9NRI5 854 aa12.4□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 TRMT13Q9NUP7 481 aaKnown RBP12.4□□□□□ -0.42
CSPG4P1Y-201ENST00000306641 HDAC6Q9UBN7 1215 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms