RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 LRRC8EQ6NSJ5 796 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 ANO5Q75V66 913 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 GJA10Q969M2 543 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 AKT3Q9Y243 479 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 CCDC103Q8IW40 242 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 ZNF654Q8IZM8 581 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 CYGBQ8WWM9 190 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 CYP4F11Q9HBI6 524 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 DNAJC17Q9NVM6 304 aaKnown RBP14.38□□□□□ -0.11
TRIM56-201ENST00000306085 BAZ2BQ9UIF8 2168 aaKnown RBP14.38□□□□□ -0.11
TRIM56-201ENST00000306085 BRD1O95696 1058 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 HSPH1Q92598 858 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 MID2Q9UJV3 735 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 ZNF507Q8TCN5 953 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 CAPZA2P47755 286 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 ADAM9Q13443 819 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 SARS2Q9NP81 518 aaKnown RBP14.38□□□□□ -0.11
TRIM56-201ENST00000306085 FMNL1O95466 1100 aaPredicted RBP14.38□□□□□ -0.11
TRIM56-201ENST00000306085 ARPP19P56211 112 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 KIAA1841Q6NSI8 718 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 CDR2LQ86X02 465 aaPredicted RBP14.38□□□□□ -0.11
TRIM56-201ENST00000306085 BRD8Q9H0E9 1235 aa14.38□□□□□ -0.11
TRIM56-201ENST00000306085 H0YCG3 227 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 HNRNPDLO14979 420 aaKnown RBP14.37□□□□□ -0.11
TRIM56-201ENST00000306085 GSPT1P15170 499 aaKnown RBP14.37□□□□□ -0.11
TRIM56-201ENST00000306085 PITPNM3Q9BZ71 974 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 GINM1Q9NU53 330 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 TBC1D23Q9NUY8 699 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 GUCA1CO95843 209 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 TCIRG1Q13488 830 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 BBS9Q3SYG4 887 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 C8orf34Q49A92 452 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 BEND6Q5SZJ8 279 aaPredicted RBP14.37□□□□□ -0.11
TRIM56-201ENST00000306085 ELAC2Q9BQ52 826 aaKnown RBP14.37□□□□□ -0.11
TRIM56-201ENST00000306085 TSC22D2O75157 780 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 PYGMP11217 842 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 NOVA2Q9UNW9 492 aaKnown RBP14.37□□□□□ -0.11
TRIM56-201ENST00000306085 KRT77Q7Z794 578 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 PLEKHM2Q8IWE5 1019 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 PI4K2BQ8TCG2 481 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 TRIM11Q96F44 468 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 PRPSAP2O60256 369 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 EAPPQ56P03 285 aaPredicted RBP14.37□□□□□ -0.11
TRIM56-201ENST00000306085 TRIM69Q86WT6 500 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 SLC35F6Q8N357 371 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 THAP11Q96EK4 314 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 CASS4Q9NQ75 786 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 TMEM161AQ9NX61 479 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 GCNT4Q9P109 453 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 STK25O00506 426 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 MMS22LQ6ZRQ5 1243 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 ZNF555Q8NEP9 628 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 TGFBRAP1Q8WUH2 860 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 TUBGCP3Q96CW5 907 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 FSD1LQ9BXM9 530 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 MFAP3P55082 362 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 BPIFB4P59827 614 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 SLFN12Q8IYM2 578 aa14.37□□□□□ -0.11
TRIM56-201ENST00000306085 ZNF18P17022 549 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 SPARCL1Q14515 664 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 KRT40Q6A162 431 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 METTL23Q86XA0 190 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 CNBD1Q8NA66 436 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 SLC7A5P2Q9GIP4 190 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 SENP1Q9P0U3 644 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 SOX13Q9UN79 622 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 AURKCQ9UQB9 309 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 THRAP3Q9Y2W1 955 aaKnown RBP14.36□□□□□ -0.11
TRIM56-201ENST00000306085 NCAPG2Q86XI2 1143 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 CLCA2Q9UQC9 943 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 ANKRD12Q6UB98 2062 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 CCDC149Q6ZUS6 474 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 INPP5DQ92835 1189 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 RNPEPQ9H4A4 650 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 ATP8B3O60423 1300 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 DR1Q01658 176 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 DNAJC24Q6P3W2 148 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 KCTD17Q8N5Z5 321 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 PDCD6IPQ8WUM4 868 aaKnown RBP14.36□□□□□ -0.11
TRIM56-201ENST00000306085 DMAP1Q9NPF5 467 aaPredicted RBP14.36□□□□□ -0.11
TRIM56-201ENST00000306085 RALGAPBQ86X10 1494 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 SEPT9Q9UHD8 586 aaPredicted RBP14.36□□□□□ -0.11
TRIM56-201ENST00000306085 TOMM70O94826 608 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 ZBED1O96006 694 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 ANXA13P27216 316 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 SERPINB1P30740 379 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 KRT28Q7Z3Y7 464 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 HAUS4Q9H6D7 363 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 FTOQ9C0B1 505 aaKnown RBP eCLIP14.36□□□□□ -0.11
TRIM56-201ENST00000306085 DCDC2Q9UHG0 476 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 LOC102724159A0A0B4J2E5 919 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 PWP2Q15269 919 aaKnown RBP14.36□□□□□ -0.11
TRIM56-201ENST00000306085 CENPUQ71F23 418 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 VPS39Q96JC1 886 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 PARVGQ9HBI0 331 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 EHD2Q9NZN4 543 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 PCDHA12Q9UN75 941 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 CENPAP49450 140 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 ULK4Q96C45 1275 aa14.36□□□□□ -0.11
TRIM56-201ENST00000306085 FAM161BQ96MY7 647 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms