RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 FGD4Q96M96 766 aa12.09□□□□□ -0.47
VWA3A-201ENST00000299840 MYL10Q9BUA6 226 aa12.09□□□□□ -0.47
VWA3A-201ENST00000299840 AMNQ9BXJ7 453 aa12.09□□□□□ -0.47
VWA3A-201ENST00000299840 UNC93B1Q9H1C4 597 aa12.09□□□□□ -0.47
VWA3A-201ENST00000299840 VAT1LQ9HCJ6 419 aa12.09□□□□□ -0.47
VWA3A-201ENST00000299840 HMX1Q9NP08 348 aaPredicted RBP12.09□□□□□ -0.47
VWA3A-201ENST00000299840 CYP39A1Q9NYL5 469 aa12.09□□□□□ -0.47
VWA3A-201ENST00000299840 SYNGAP1Q96PV0 1343 aa12.09□□□□□ -0.47
VWA3A-201ENST00000299840 ZBTB43O43298 467 aa12.09□□□□□ -0.47
VWA3A-201ENST00000299840 ZNF24P17028 368 aa12.09□□□□□ -0.47
VWA3A-201ENST00000299840 PEX19P40855 299 aa12.09□□□□□ -0.47
VWA3A-201ENST00000299840 MRPL12P52815 198 aaKnown RBP12.09□□□□□ -0.47
VWA3A-201ENST00000299840 ELF2Q15723 593 aa12.09□□□□□ -0.47
VWA3A-201ENST00000299840 ACBD5Q5T8D3 534 aaPredicted RBP12.09□□□□□ -0.47
VWA3A-201ENST00000299840 MCTP1Q6DN14 999 aa12.09□□□□□ -0.47
VWA3A-201ENST00000299840 TMTC3Q6ZXV5 915 aa12.09□□□□□ -0.47
VWA3A-201ENST00000299840 SPATA21Q7Z572 469 aa12.09□□□□□ -0.47
VWA3A-201ENST00000299840 TSPY26PQ9H489 355 aa12.09□□□□□ -0.47
VWA3A-201ENST00000299840 HOMER2Q9NSB8 354 aa12.09□□□□□ -0.47
VWA3A-201ENST00000299840 MRPL11Q9Y3B7 192 aaKnown RBP12.09□□□□□ -0.47
VWA3A-201ENST00000299840 KLF18A0A0U1RQI7 1052 aa12.08□□□□□ -0.48
VWA3A-201ENST00000299840 A0A1B0GUA9 196 aa12.08□□□□□ -0.48
VWA3A-201ENST00000299840 RPS6KA5O75582 802 aa12.08□□□□□ -0.48
VWA3A-201ENST00000299840 PRKAR2AP13861 404 aaKnown RBP12.08□□□□□ -0.48
VWA3A-201ENST00000299840 H2AFXP16104 143 aaPredicted RBP12.08□□□□□ -0.48
VWA3A-201ENST00000299840 SRBD1Q8N5C6 995 aaKnown RBP12.08□□□□□ -0.48
VWA3A-201ENST00000299840 PIGSQ96S52 555 aa12.08□□□□□ -0.48
VWA3A-201ENST00000299840 TINF2Q9BSI4 451 aa12.08□□□□□ -0.48
VWA3A-201ENST00000299840 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.08□□□□□ -0.48
VWA3A-201ENST00000299840 MAP3K20Q9NYL2 800 aaKnown RBP12.08□□□□□ -0.48
VWA3A-201ENST00000299840 POTEB2H3BUK9 544 aa12.08□□□□□ -0.48
VWA3A-201ENST00000299840 PPP1R11O60927 126 aaPredicted RBP12.08□□□□□ -0.48
VWA3A-201ENST00000299840 CYBAP13498 195 aa12.08□□□□□ -0.48
VWA3A-201ENST00000299840 GJA8P48165 433 aa12.08□□□□□ -0.48
VWA3A-201ENST00000299840 ZBED6P86452 979 aa12.08□□□□□ -0.48
VWA3A-201ENST00000299840 MCF2L2Q86YR7 1114 aa12.08□□□□□ -0.48
VWA3A-201ENST00000299840 MORC4Q8TE76 937 aa12.08□□□□□ -0.48
VWA3A-201ENST00000299840 BRF1Q92994 677 aa12.08□□□□□ -0.48
VWA3A-201ENST00000299840 CRISPLD2Q9H0B8 497 aa12.08□□□□□ -0.48
VWA3A-201ENST00000299840 RNF208Q9H0X6 261 aa12.08□□□□□ -0.48
VWA3A-201ENST00000299840 UNC45AQ9H3U1 944 aa12.08□□□□□ -0.48
VWA3A-201ENST00000299840 KIAA1217Q5T5P2 1943 aa12.07□□□□□ -0.48
VWA3A-201ENST00000299840 NFIBO00712 420 aa12.07□□□□□ -0.48
VWA3A-201ENST00000299840 ERLIN2O94905 339 aa12.07□□□□□ -0.48
VWA3A-201ENST00000299840 PLEKHA8P1O95397 391 aa12.07□□□□□ -0.48
VWA3A-201ENST00000299840 ADCY5O95622 1261 aa12.07□□□□□ -0.48
VWA3A-201ENST00000299840 TAL1P17542 331 aaPredicted RBP12.07□□□□□ -0.48
VWA3A-201ENST00000299840 FLT3P36888 993 aa12.07□□□□□ -0.48
VWA3A-201ENST00000299840 APOBRQ0VD83 1088 aa12.07□□□□□ -0.48
VWA3A-201ENST00000299840 TOB2Q14106 344 aaPredicted RBP12.07□□□□□ -0.48
VWA3A-201ENST00000299840 RTN1Q16799 776 aa12.07□□□□□ -0.48
VWA3A-201ENST00000299840 LONRF3Q496Y0 759 aa12.07□□□□□ -0.48
VWA3A-201ENST00000299840 MICU3Q86XE3 530 aa12.07□□□□□ -0.48
VWA3A-201ENST00000299840 SPC24Q8NBT2 197 aa12.07□□□□□ -0.48
VWA3A-201ENST00000299840 EZH1Q92800 747 aaPredicted RBP12.07□□□□□ -0.48
VWA3A-201ENST00000299840 RRP36Q96EU6 259 aaKnown RBP12.07□□□□□ -0.48
VWA3A-201ENST00000299840 TRIM7Q9C029 511 aa12.07□□□□□ -0.48
VWA3A-201ENST00000299840 FAM217BQ9NTX9 383 aaPredicted RBP12.07□□□□□ -0.48
VWA3A-201ENST00000299840 ZNF215Q9UL58 517 aaPredicted RBP12.07□□□□□ -0.48
VWA3A-201ENST00000299840 POTEFA5A3E0 1075 aa12.07□□□□□ -0.48
VWA3A-201ENST00000299840 SOWAHBA6NEL2 793 aa12.07□□□□□ -0.48
VWA3A-201ENST00000299840 SGPL1O95470 568 aa12.07□□□□□ -0.48
VWA3A-201ENST00000299840 RXRAP19793 462 aa12.07□□□□□ -0.48
VWA3A-201ENST00000299840 SLC7A5Q01650 507 aa12.07□□□□□ -0.48
VWA3A-201ENST00000299840 FUT2Q10981 343 aa12.07□□□□□ -0.48
VWA3A-201ENST00000299840 USP4Q13107 963 aa12.07□□□□□ -0.48
VWA3A-201ENST00000299840 BAATQ14032 418 aaPredicted RBP12.07□□□□□ -0.48
VWA3A-201ENST00000299840 SFMBT2Q5VUG0 894 aa12.07□□□□□ -0.48
VWA3A-201ENST00000299840 MYSM1Q5VVJ2 828 aa12.07□□□□□ -0.48
VWA3A-201ENST00000299840 RNF207Q6ZRF8 634 aa12.07□□□□□ -0.48
VWA3A-201ENST00000299840 CACTIN-AS1Q8N1I8 211 aa12.07□□□□□ -0.48
VWA3A-201ENST00000299840 UBXN6Q9BZV1 441 aa12.07□□□□□ -0.48
VWA3A-201ENST00000299840 ASB14A6NK59 587 aa12.06□□□□□ -0.48
VWA3A-201ENST00000299840 GOLGA8AA7E2F4 631 aa12.06□□□□□ -0.48
VWA3A-201ENST00000299840 GOLGA8BA8MQT2 603 aa12.06□□□□□ -0.48
VWA3A-201ENST00000299840 MARCH6O60337 910 aa12.06□□□□□ -0.48
VWA3A-201ENST00000299840 OAS2P29728 719 aaKnown RBP12.06□□□□□ -0.48
VWA3A-201ENST00000299840 SOX10P56693 466 aa12.06□□□□□ -0.48
VWA3A-201ENST00000299840 PSMC1P62191 440 aaKnown RBP12.06□□□□□ -0.48
VWA3A-201ENST00000299840 E2F5Q15329 346 aa12.06□□□□□ -0.48
VWA3A-201ENST00000299840 USH1GQ495M9 461 aa12.06□□□□□ -0.48
VWA3A-201ENST00000299840 NSMFQ6X4W1 530 aa12.06□□□□□ -0.48
VWA3A-201ENST00000299840 TRPV1Q8NER1 839 aa12.06□□□□□ -0.48
VWA3A-201ENST00000299840 ZNF274Q96GC6 653 aaPredicted RBP12.06□□□□□ -0.48
VWA3A-201ENST00000299840 FAM107BQ9H098 131 aa12.06□□□□□ -0.48
VWA3A-201ENST00000299840 ADD3Q9UEY8 706 aaKnown RBP12.06□□□□□ -0.48
VWA3A-201ENST00000299840 ODF2LQ9ULJ1 636 aa12.06□□□□□ -0.48
VWA3A-201ENST00000299840 RABL2BQ9UNT1 228 aa12.06□□□□□ -0.48
VWA3A-201ENST00000299840 PPME1Q9Y570 386 aa12.06□□□□□ -0.48
VWA3A-201ENST00000299840 MRFAP1Q9Y605 127 aa12.06□□□□□ -0.48
VWA3A-201ENST00000299840 CNTNAP5Q8WYK1 1306 aa12.06□□□□□ -0.48
VWA3A-201ENST00000299840 MSCO60682 206 aa12.06□□□□□ -0.48
VWA3A-201ENST00000299840 SNAI1O95863 264 aaPredicted RBP12.06□□□□□ -0.48
VWA3A-201ENST00000299840 NAT2P11245 290 aa12.06□□□□□ -0.48
VWA3A-201ENST00000299840 CCND3P30281 292 aaPredicted RBP12.06□□□□□ -0.48
VWA3A-201ENST00000299840 RANBP1P43487 201 aa12.06□□□□□ -0.48
VWA3A-201ENST00000299840 CNTN2Q02246 1040 aa12.06□□□□□ -0.48
VWA3A-201ENST00000299840 PRPF4BQ13523 1007 aaKnown RBP12.06□□□□□ -0.48
VWA3A-201ENST00000299840 CCDC144CPQ8IYA2 1237 aa12.06□□□□□ -0.48
VWA3A-201ENST00000299840 DNERQ8NFT8 737 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms