RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 KLHL7Q8IXQ5 586 aa26.86■■□□□ 1.89
SPTSSA-201ENST00000298130 P2RX7Q99572 595 aaKnown RBP26.86■■□□□ 1.89
SPTSSA-201ENST00000298130 ATP6V0A2Q9Y487 856 aa26.86■■□□□ 1.89
SPTSSA-201ENST00000298130 HEXIM1O94992 359 aaKnown RBP26.86■■□□□ 1.89
SPTSSA-201ENST00000298130 PRLRP16471 622 aa26.86■■□□□ 1.89
SPTSSA-201ENST00000298130 CYP11B2P19099 503 aa26.86■■□□□ 1.89
SPTSSA-201ENST00000298130 CCT5P48643 541 aa26.86■■□□□ 1.89
SPTSSA-201ENST00000298130 PSMD2Q13200 908 aa26.86■■□□□ 1.89
SPTSSA-201ENST00000298130 ARSHQ5FYA8 562 aa26.86■■□□□ 1.89
SPTSSA-201ENST00000298130 FAM163AQ96GL9 167 aaPredicted RBP26.86■■□□□ 1.89
SPTSSA-201ENST00000298130 PCDHA2Q9Y5H9 948 aa26.86■■□□□ 1.89
SPTSSA-201ENST00000298130 ZBTB5O15062 677 aa26.85■■□□□ 1.89
SPTSSA-201ENST00000298130 SERPING1P05155 500 aa26.85■■□□□ 1.89
SPTSSA-201ENST00000298130 IRAK1P51617 712 aa26.85■■□□□ 1.89
SPTSSA-201ENST00000298130 KCNH2Q12809 1159 aa26.85■■□□□ 1.89
SPTSSA-201ENST00000298130 ORC2Q13416 577 aaPredicted RBP26.85■■□□□ 1.89
SPTSSA-201ENST00000298130 CFAP221Q4G0U5 840 aa26.85■■□□□ 1.89
SPTSSA-201ENST00000298130 C15orf52Q6ZUT6 534 aaKnown RBP26.85■■□□□ 1.89
SPTSSA-201ENST00000298130 TRIM59Q8IWR1 403 aa26.85■■□□□ 1.89
SPTSSA-201ENST00000298130 RBM17Q96I25 401 aaKnown RBP26.85■■□□□ 1.89
SPTSSA-201ENST00000298130 ZIM3Q96PE6 472 aa26.85■■□□□ 1.89
SPTSSA-201ENST00000298130 PCDHA1Q9Y5I3 950 aa26.85■■□□□ 1.89
SPTSSA-201ENST00000298130 IGKV6D-41A0A0C4DH26 115 aa26.84■■□□□ 1.89
SPTSSA-201ENST00000298130 SSU72P8A0A1W2PR75 194 aa26.84■■□□□ 1.89
SPTSSA-201ENST00000298130 RGL2O15211 777 aa26.84■■□□□ 1.89
SPTSSA-201ENST00000298130 NR2F2P24468 414 aa26.84■■□□□ 1.89
SPTSSA-201ENST00000298130 CYP4A11Q02928 519 aa26.84■■□□□ 1.89
SPTSSA-201ENST00000298130 QRICH1Q2TAL8 776 aa26.84■■□□□ 1.89
SPTSSA-201ENST00000298130 PRR16Q569H4 304 aa26.84■■□□□ 1.89
SPTSSA-201ENST00000298130 SLF2Q8IX21 1173 aa26.84■■□□□ 1.89
SPTSSA-201ENST00000298130 CCDC65Q8IXS2 484 aa26.84■■□□□ 1.89
SPTSSA-201ENST00000298130 IQCDQ96DY2 449 aa26.84■■□□□ 1.89
SPTSSA-201ENST00000298130 PPFIA4O75335 1185 aa26.84■■□□□ 1.89
SPTSSA-201ENST00000298130 GYS1P13807 737 aa26.84■■□□□ 1.89
SPTSSA-201ENST00000298130 GNGT1P63211 74 aa26.84■■□□□ 1.89
SPTSSA-201ENST00000298130 USH1GQ495M9 461 aa26.84■■□□□ 1.89
SPTSSA-201ENST00000298130 CCDC43Q96MW1 224 aaKnown RBP26.84■■□□□ 1.89
SPTSSA-201ENST00000298130 KCTD10Q9H3F6 313 aa26.84■■□□□ 1.89
SPTSSA-201ENST00000298130 SRCAPQ6ZRS2 3230 aa26.84■■□□□ 1.89
SPTSSA-201ENST00000298130 PROM2Q8N271 834 aa26.83■■□□□ 1.89
SPTSSA-201ENST00000298130 RUFY1Q96T51 708 aa26.83■■□□□ 1.89
SPTSSA-201ENST00000298130 KCNQ5Q9NR82 932 aa26.83■■□□□ 1.89
SPTSSA-201ENST00000298130 ABCB11O95342 1321 aa26.83■■□□□ 1.89
SPTSSA-201ENST00000298130 EPHB4P54760 987 aa26.83■■□□□ 1.89
SPTSSA-201ENST00000298130 VPS72Q15906 364 aa26.83■■□□□ 1.89
SPTSSA-201ENST00000298130 DCAF17Q5H9S7 520 aaPredicted RBP26.83■■□□□ 1.89
SPTSSA-201ENST00000298130 SAMM50Q9Y512 469 aa26.83■■□□□ 1.89
SPTSSA-201ENST00000298130 SFI1A8K8P3 1242 aa26.82■■□□□ 1.88
SPTSSA-201ENST00000298130 RSPH10B2B2RC85 870 aa26.82■■□□□ 1.88
SPTSSA-201ENST00000298130 hCG_1984214I3L0E3 225 aa26.82■■□□□ 1.88
SPTSSA-201ENST00000298130 RSPH10BP0C881 870 aa26.82■■□□□ 1.88
SPTSSA-201ENST00000298130 ZNF572Q7Z3I7 529 aaPredicted RBP26.82■■□□□ 1.88
SPTSSA-201ENST00000298130 ZNF713Q8N859 430 aaPredicted RBP26.82■■□□□ 1.88
SPTSSA-201ENST00000298130 PTK2Q05397 1052 aa26.82■■□□□ 1.88
SPTSSA-201ENST00000298130 SLC18A3Q16572 532 aa26.82■■□□□ 1.88
SPTSSA-201ENST00000298130 CRY2Q49AN0 593 aa26.82■■□□□ 1.88
SPTSSA-201ENST00000298130 TCERG1LQ5VWI1 586 aa26.82■■□□□ 1.88
SPTSSA-201ENST00000298130 GJB7Q6PEY0 223 aa26.82■■□□□ 1.88
SPTSSA-201ENST00000298130 TBC1D22AQ8WUA7 517 aa26.82■■□□□ 1.88
SPTSSA-201ENST00000298130 LRRC27Q9C0I9 530 aa26.82■■□□□ 1.88
SPTSSA-201ENST00000298130 KCNA1Q09470 495 aa26.81■■□□□ 1.88
SPTSSA-201ENST00000298130 PDCLQ13371 301 aa26.81■■□□□ 1.88
SPTSSA-201ENST00000298130 NAB2Q15742 525 aa26.81■■□□□ 1.88
SPTSSA-201ENST00000298130 CAPS2Q9BXY5 557 aa26.81■■□□□ 1.88
SPTSSA-201ENST00000298130 MYH7BA7E2Y1 1941 aa26.81■■□□□ 1.88
SPTSSA-201ENST00000298130 GRID2IPA4D2P6 1211 aa26.81■■□□□ 1.88
SPTSSA-201ENST00000298130 NOP2P46087 812 aaKnown RBP26.81■■□□□ 1.88
SPTSSA-201ENST00000298130 ASIC2Q16515 512 aa26.81■■□□□ 1.88
SPTSSA-201ENST00000298130 CATSPER3Q86XQ3 398 aa26.81■■□□□ 1.88
SPTSSA-201ENST00000298130 CERS3Q8IU89 383 aa26.81■■□□□ 1.88
SPTSSA-201ENST00000298130 ANO3Q9BYT9 981 aa26.81■■□□□ 1.88
SPTSSA-201ENST00000298130 PODXL2Q9NZ53 605 aa26.81■■□□□ 1.88
SPTSSA-201ENST00000298130 HSF2BPO75031 334 aa26.8■■□□□ 1.88
SPTSSA-201ENST00000298130 MYBP10242 640 aa26.8■■□□□ 1.88
SPTSSA-201ENST00000298130 CDC42EP5Q6NZY7 148 aa26.8■■□□□ 1.88
SPTSSA-201ENST00000298130 BCAS4Q8TDM0 211 aa26.8■■□□□ 1.88
SPTSSA-201ENST00000298130 BTAF1O14981 1849 aa26.8■■□□□ 1.88
SPTSSA-201ENST00000298130 CLIC2O15247 247 aa26.8■■□□□ 1.88
SPTSSA-201ENST00000298130 SFR1Q86XK3 245 aa26.8■■□□□ 1.88
SPTSSA-201ENST00000298130 CYP2W1Q8TAV3 490 aa26.8■■□□□ 1.88
SPTSSA-201ENST00000298130 HDAC9Q9UKV0 1011 aa26.8■■□□□ 1.88
SPTSSA-201ENST00000298130 KCNK3O14649 394 aa26.8■■□□□ 1.88
SPTSSA-201ENST00000298130 ZNF571Q7Z3V5 609 aaPredicted RBP26.8■■□□□ 1.88
SPTSSA-201ENST00000298130 CASKIN2Q8WXE0 1202 aa26.8■■□□□ 1.88
SPTSSA-201ENST00000298130 AJAP1Q9UKB5 411 aaPredicted RBP26.8■■□□□ 1.88
SPTSSA-201ENST00000298130 ATF5Q9Y2D1 282 aaPredicted RBP26.8■■□□□ 1.88
SPTSSA-201ENST00000298130 RBAK-RBAKDNI3L0D1 243 aa26.79■■□□□ 1.88
SPTSSA-201ENST00000298130 ITIH3Q06033 890 aa26.79■■□□□ 1.88
SPTSSA-201ENST00000298130 DDR1Q08345 913 aa26.79■■□□□ 1.88
SPTSSA-201ENST00000298130 RNF10Q8N5U6 811 aaKnown RBP26.79■■□□□ 1.88
SPTSSA-201ENST00000298130 NT5C3AQ9H0P0 336 aa26.79■■□□□ 1.88
SPTSSA-201ENST00000298130 GANQ9H2C0 597 aa26.79■■□□□ 1.88
SPTSSA-201ENST00000298130 DNAJC18Q9H819 358 aa26.79■■□□□ 1.88
SPTSSA-201ENST00000298130 CASP4P49662 377 aa26.79■■□□□ 1.88
SPTSSA-201ENST00000298130 SPAG5Q96R06 1193 aa26.79■■□□□ 1.88
SPTSSA-201ENST00000298130 AP1M1Q9BXS5 423 aa26.79■■□□□ 1.88
SPTSSA-201ENST00000298130 ZEB2O60315 1214 aa26.78■■□□□ 1.88
SPTSSA-201ENST00000298130 EEF2P13639 858 aaKnown RBP26.78■■□□□ 1.88
SPTSSA-201ENST00000298130 CDC37Q16543 378 aaPredicted RBP26.78■■□□□ 1.88
SPTSSA-201ENST00000298130 DDX42Q86XP3 938 aaKnown RBP eCLIP26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms