RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 TRIM34Q9BYJ4 488 aa18.34■□□□□ 0.53
RPN1-201ENST00000296255 GANQ9H2C0 597 aa18.34■□□□□ 0.53
RPN1-201ENST00000296255 EMILIN3Q9NT22 766 aa18.34■□□□□ 0.53
RPN1-201ENST00000296255 GOLGA6AQ9NYA3 693 aa18.34■□□□□ 0.53
RPN1-201ENST00000296255 MYO3BQ8WXR4 1341 aa18.34■□□□□ 0.53
RPN1-201ENST00000296255 FTCDO95954 541 aa18.34■□□□□ 0.53
RPN1-201ENST00000296255 SCNN1DP51172 638 aa18.34■□□□□ 0.53
RPN1-201ENST00000296255 EPHB4P54760 987 aa18.34■□□□□ 0.53
RPN1-201ENST00000296255 DDR1Q08345 913 aa18.34■□□□□ 0.53
RPN1-201ENST00000296255 RAPGEF1Q13905 1077 aa18.34■□□□□ 0.53
RPN1-201ENST00000296255 SLC18A3Q16572 532 aa18.34■□□□□ 0.53
RPN1-201ENST00000296255 CRAMP1Q96RY5 1269 aa18.34■□□□□ 0.53
RPN1-201ENST00000296255 TSKSQ9UJT2 592 aa18.34■□□□□ 0.53
RPN1-201ENST00000296255 LRRC37AA6NMS7 1700 aa18.34■□□□□ 0.53
RPN1-201ENST00000296255 UBR3Q6ZT12 1888 aa18.34■□□□□ 0.53
RPN1-201ENST00000296255 QSER1Q2KHR3 1735 aa18.33■□□□□ 0.53
RPN1-201ENST00000296255 FRMD3A2A2Y4 597 aa18.33■□□□□ 0.53
RPN1-201ENST00000296255 GLI1P08151 1106 aa18.33■□□□□ 0.53
RPN1-201ENST00000296255 CASP5P51878 434 aa18.33■□□□□ 0.53
RPN1-201ENST00000296255 SLC12A3P55017 1021 aa18.33■□□□□ 0.53
RPN1-201ENST00000296255 SLC20A2Q08357 652 aa18.33■□□□□ 0.53
RPN1-201ENST00000296255 ADAM9Q13443 819 aa18.33■□□□□ 0.53
RPN1-201ENST00000296255 SHROOM1Q2M3G4 852 aaPredicted RBP18.33■□□□□ 0.53
RPN1-201ENST00000296255 QRICH1Q2TAL8 776 aa18.33■□□□□ 0.53
RPN1-201ENST00000296255 CFAP221Q4G0U5 840 aa18.33■□□□□ 0.53
RPN1-201ENST00000296255 CDC42EP5Q6NZY7 148 aa18.33■□□□□ 0.53
RPN1-201ENST00000296255 EMBQ6PCB8 327 aa18.33■□□□□ 0.53
RPN1-201ENST00000296255 FAM133AQ8N9E0 248 aa18.33■□□□□ 0.53
RPN1-201ENST00000296255 CAVIN3Q969G5 261 aa18.33■□□□□ 0.53
RPN1-201ENST00000296255 AIPL1Q9NZN9 384 aa18.33■□□□□ 0.53
RPN1-201ENST00000296255 POTEFA5A3E0 1075 aa18.33■□□□□ 0.52
RPN1-201ENST00000296255 PPFIA4O75335 1185 aa18.33■□□□□ 0.52
RPN1-201ENST00000296255 POTEIP0CG38 1075 aa18.33■□□□□ 0.52
RPN1-201ENST00000296255 DNA2P51530 1060 aa18.33■□□□□ 0.52
RPN1-201ENST00000296255 ENOX2Q16206 610 aaKnown RBP18.33■□□□□ 0.52
RPN1-201ENST00000296255 DPY19L2P1Q6NXN4 242 aa18.33■□□□□ 0.52
RPN1-201ENST00000296255 POTEGQ6S5H5 508 aa18.33■□□□□ 0.52
RPN1-201ENST00000296255 POTEEQ6S8J3 1075 aa18.33■□□□□ 0.52
RPN1-201ENST00000296255 ZFPM1Q8IX07 1006 aa18.33■□□□□ 0.52
RPN1-201ENST00000296255 P2RX7Q99572 595 aaKnown RBP18.33■□□□□ 0.52
RPN1-201ENST00000296255 PCDHGC5Q9Y5F6 944 aa18.33■□□□□ 0.52
RPN1-201ENST00000296255 CYP3A7-CYP3A51PA0A087WV96 503 aa18.32■□□□□ 0.52
RPN1-201ENST00000296255 CYP3A7P24462 503 aa18.32■□□□□ 0.52
RPN1-201ENST00000296255 NFIAQ12857 509 aa18.32■□□□□ 0.52
RPN1-201ENST00000296255 MEI1Q5TIA1 1274 aa18.32■□□□□ 0.52
RPN1-201ENST00000296255 MBOAT7Q96N66 472 aa18.32■□□□□ 0.52
RPN1-201ENST00000296255 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.32■□□□□ 0.52
RPN1-201ENST00000296255 ANO3Q9BYT9 981 aa18.32■□□□□ 0.52
RPN1-201ENST00000296255 COA1Q9GZY4 146 aa18.32■□□□□ 0.52
RPN1-201ENST00000296255 RASSF4Q9H2L5 321 aa18.32■□□□□ 0.52
RPN1-201ENST00000296255 ADAMTS1Q9UHI8 967 aa18.32■□□□□ 0.52
RPN1-201ENST00000296255 PACSIN2Q9UNF0 486 aaPredicted RBP18.32■□□□□ 0.52
RPN1-201ENST00000296255 SUGT1Q9Y2Z0 365 aa18.32■□□□□ 0.52
RPN1-201ENST00000296255 ZSCAN5CA6NGD5 496 aaPredicted RBP18.32■□□□□ 0.52
RPN1-201ENST00000296255 USP11P51784 963 aa18.32■□□□□ 0.52
RPN1-201ENST00000296255 PSMC6P62333 389 aa18.32■□□□□ 0.52
RPN1-201ENST00000296255 KCNH2Q12809 1159 aa18.32■□□□□ 0.52
RPN1-201ENST00000296255 KIAA0753Q2KHM9 967 aa18.32■□□□□ 0.52
RPN1-201ENST00000296255 GLE1Q53GS7 698 aaKnown RBP18.32■□□□□ 0.52
RPN1-201ENST00000296255 NAP1L4Q99733 375 aaKnown RBP18.32■□□□□ 0.52
RPN1-201ENST00000296255 DHX36Q9H2U1 1008 aaKnown RBP18.32■□□□□ 0.52
RPN1-201ENST00000296255 DNAJC18Q9H819 358 aa18.32■□□□□ 0.52
RPN1-201ENST00000296255 GDF3Q9NR23 364 aa18.32■□□□□ 0.52
RPN1-201ENST00000296255 RNF14Q9UBS8 474 aa18.32■□□□□ 0.52
RPN1-201ENST00000296255 PCDHA1Q9Y5I3 950 aa18.32■□□□□ 0.52
RPN1-201ENST00000296255 ACTN1P12814 892 aa18.31■□□□□ 0.52
RPN1-201ENST00000296255 HOXD13P35453 343 aa18.31■□□□□ 0.52
RPN1-201ENST00000296255 IRAK1P51617 712 aa18.31■□□□□ 0.52
RPN1-201ENST00000296255 SPIRE1Q08AE8 756 aa18.31■□□□□ 0.52
RPN1-201ENST00000296255 KLHL30Q0D2K2 578 aa18.31■□□□□ 0.52
RPN1-201ENST00000296255 ARL8AQ96BM9 186 aa18.31■□□□□ 0.52
RPN1-201ENST00000296255 ZHX3Q9H4I2 956 aa18.31■□□□□ 0.52
RPN1-201ENST00000296255 USP21Q9UK80 565 aa18.31■□□□□ 0.52
RPN1-201ENST00000296255 GRID2IPA4D2P6 1211 aa18.31■□□□□ 0.52
RPN1-201ENST00000296255 PPEF1O14829 653 aaPredicted RBP18.31■□□□□ 0.52
RPN1-201ENST00000296255 FAM153BP0C7A2 387 aa18.31■□□□□ 0.52
RPN1-201ENST00000296255 CARSP49589 748 aaKnown RBP18.31■□□□□ 0.52
RPN1-201ENST00000296255 ASIC2Q16515 512 aa18.31■□□□□ 0.52
RPN1-201ENST00000296255 EDRF1Q3B7T1 1238 aa18.31■□□□□ 0.52
RPN1-201ENST00000296255 FAM153CQ494X1 144 aa18.31■□□□□ 0.52
RPN1-201ENST00000296255 TTMPQ5BVD1 217 aa18.31■□□□□ 0.52
RPN1-201ENST00000296255 APOBEC3HQ6NTF7 200 aaKnown RBP18.31■□□□□ 0.52
RPN1-201ENST00000296255 CATSPER3Q86XQ3 398 aa18.31■□□□□ 0.52
RPN1-201ENST00000296255 SP8Q8IXZ3 490 aa18.31■□□□□ 0.52
RPN1-201ENST00000296255 CRYGNQ8WXF5 182 aa18.31■□□□□ 0.52
RPN1-201ENST00000296255 INPP4AQ96PE3 977 aaPredicted RBP18.31■□□□□ 0.52
RPN1-201ENST00000296255 FAM153AQ9UHL3 310 aa18.31■□□□□ 0.52
RPN1-201ENST00000296255 ESYT3A0FGR9 886 aa18.3■□□□□ 0.52
RPN1-201ENST00000296255 KLRG2A4D1S0 409 aaPredicted RBP18.3■□□□□ 0.52
RPN1-201ENST00000296255 GOLGA8KD6RF30 607 aa18.3■□□□□ 0.52
RPN1-201ENST00000296255 MEIS2O14770 477 aa18.3■□□□□ 0.52
RPN1-201ENST00000296255 RAD21O60216 631 aa18.3■□□□□ 0.52
RPN1-201ENST00000296255 KRT18P05783 430 aaKnown RBP18.3■□□□□ 0.52
RPN1-201ENST00000296255 NR2F2P24468 414 aa18.3■□□□□ 0.52
RPN1-201ENST00000296255 GIT2Q14161 759 aa18.3■□□□□ 0.52
RPN1-201ENST00000296255 ALS2CLQ60I27 953 aa18.3■□□□□ 0.52
RPN1-201ENST00000296255 ETNPPLQ8TBG4 499 aa18.3■□□□□ 0.52
RPN1-201ENST00000296255 EHD4Q9H223 541 aa18.3■□□□□ 0.52
RPN1-201ENST00000296255 LUC7LQ9NQ29 371 aaKnown RBP18.3■□□□□ 0.52
RPN1-201ENST00000296255 HDAC9Q9UKV0 1011 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms