RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 PLAAQ9Y263 795 aa13.24□□□□□ -0.29
CLPB-201ENST00000294053 ADRA2BP18089 450 aa13.24□□□□□ -0.29
CLPB-201ENST00000294053 MAGEA1P43355 309 aa13.24□□□□□ -0.29
CLPB-201ENST00000294053 TCP10Q12799 353 aa13.24□□□□□ -0.29
CLPB-201ENST00000294053 STK4Q13043 487 aa13.24□□□□□ -0.29
CLPB-201ENST00000294053 KCTD1Q719H9 257 aa13.24□□□□□ -0.29
CLPB-201ENST00000294053 MMTAG2Q9BU76 263 aaKnown RBP13.24□□□□□ -0.29
CLPB-201ENST00000294053 SPZ1Q9BXG8 430 aa13.24□□□□□ -0.29
CLPB-201ENST00000294053 TRIM31Q9BZY9 425 aa13.24□□□□□ -0.29
CLPB-201ENST00000294053 VCPKMTQ9H867 229 aa13.24□□□□□ -0.29
CLPB-201ENST00000294053 MTMR4Q9NYA4 1195 aa13.24□□□□□ -0.29
CLPB-201ENST00000294053 SEC63Q9UGP8 760 aaKnown RBP13.24□□□□□ -0.29
CLPB-201ENST00000294053 RWDD2AQ9UIY3 292 aa13.24□□□□□ -0.29
CLPB-201ENST00000294053 MCM8Q9UJA3 840 aa13.24□□□□□ -0.29
CLPB-201ENST00000294053 TPX2Q9ULW0 747 aaKnown RBP13.24□□□□□ -0.29
CLPB-201ENST00000294053 TLDC2A0PJX2 215 aa13.23□□□□□ -0.29
CLPB-201ENST00000294053 POTEMA6NI47 508 aa13.23□□□□□ -0.29
CLPB-201ENST00000294053 PPP1R11O60927 126 aaPredicted RBP13.23□□□□□ -0.29
CLPB-201ENST00000294053 GCFC2P16383 781 aaKnown RBP13.23□□□□□ -0.29
CLPB-201ENST00000294053 MDH1P40925 334 aaKnown RBP13.23□□□□□ -0.29
CLPB-201ENST00000294053 NONOQ15233 471 aaKnown RBP eCLIP13.23□□□□□ -0.29
CLPB-201ENST00000294053 ALS2CLQ60I27 953 aa13.23□□□□□ -0.29
CLPB-201ENST00000294053 RRAGAQ7L523 313 aa13.23□□□□□ -0.29
CLPB-201ENST00000294053 CABP7Q86V35 215 aa13.23□□□□□ -0.29
CLPB-201ENST00000294053 DDX42Q86XP3 938 aaKnown RBP eCLIP13.23□□□□□ -0.29
CLPB-201ENST00000294053 TRIM58Q8NG06 486 aa13.23□□□□□ -0.29
CLPB-201ENST00000294053 CYFIP2Q96F07 1278 aa13.23□□□□□ -0.29
CLPB-201ENST00000294053 NUDT12Q9BQG2 462 aa13.23□□□□□ -0.29
CLPB-201ENST00000294053 NLRC4Q9NPP4 1024 aa13.23□□□□□ -0.29
CLPB-201ENST00000294053 MPHOSPH10O00566 681 aaKnown RBP13.23□□□□□ -0.29
CLPB-201ENST00000294053 OR52Z1P0C646 297 aa13.23□□□□□ -0.29
CLPB-201ENST00000294053 TAL1P17542 331 aaPredicted RBP13.23□□□□□ -0.29
CLPB-201ENST00000294053 EIF4A3P38919 411 aaKnown RBP13.23□□□□□ -0.29
CLPB-201ENST00000294053 SMTNP53814 917 aa13.23□□□□□ -0.29
CLPB-201ENST00000294053 ACCSLQ4AC99 568 aa13.23□□□□□ -0.29
CLPB-201ENST00000294053 HAUS3Q68CZ6 603 aa13.23□□□□□ -0.29
CLPB-201ENST00000294053 ADSSL1Q8N142 457 aa13.23□□□□□ -0.29
CLPB-201ENST00000294053 DAGLBQ8NCG7 672 aa13.23□□□□□ -0.29
CLPB-201ENST00000294053 SPDL1Q96EA4 605 aa13.23□□□□□ -0.29
CLPB-201ENST00000294053 DNM1LO00429 736 aa13.22□□□□□ -0.29
CLPB-201ENST00000294053 HOXA10P31260 410 aaPredicted RBP13.22□□□□□ -0.29
CLPB-201ENST00000294053 PREPLQ4J6C6 727 aaPredicted RBP13.22□□□□□ -0.29
CLPB-201ENST00000294053 EMBQ6PCB8 327 aa13.22□□□□□ -0.29
CLPB-201ENST00000294053 NEK8Q86SG6 692 aa13.22□□□□□ -0.29
CLPB-201ENST00000294053 CCDC113Q9H0I3 377 aa13.22□□□□□ -0.29
CLPB-201ENST00000294053 USP40Q9NVE5 1235 aa13.22□□□□□ -0.29
CLPB-201ENST00000294053 KBTBD4Q9NVX7 518 aa13.22□□□□□ -0.29
CLPB-201ENST00000294053 L3MBTL1Q9Y468 752 aa13.22□□□□□ -0.29
CLPB-201ENST00000294053 ITIH6Q6UXX5 1313 aa13.22□□□□□ -0.29
CLPB-201ENST00000294053 PSMA7O14818 248 aa13.22□□□□□ -0.29
CLPB-201ENST00000294053 EHHADHQ08426 723 aa13.22□□□□□ -0.29
CLPB-201ENST00000294053 QPCTQ16769 361 aa13.22□□□□□ -0.29
CLPB-201ENST00000294053 CACNA2D4Q7Z3S7 1137 aa13.22□□□□□ -0.29
CLPB-201ENST00000294053 REXO1Q8N1G1 1221 aaKnown RBP13.22□□□□□ -0.29
CLPB-201ENST00000294053 EXOC1Q9NV70 894 aa13.22□□□□□ -0.29
CLPB-201ENST00000294053 RGS17Q9UGC6 210 aaPredicted RBP13.22□□□□□ -0.29
CLPB-201ENST00000294053 PCDHA13Q9Y5I0 950 aa13.22□□□□□ -0.29
CLPB-201ENST00000294053 LGALS16A8MUM7 142 aa13.22□□□□□ -0.29
CLPB-201ENST00000294053 KIF4AO95239 1232 aa13.22□□□□□ -0.29
CLPB-201ENST00000294053 GABPAQ06546 454 aa13.22□□□□□ -0.29
CLPB-201ENST00000294053 FAM133BQ5BKY9 247 aaKnown RBP13.22□□□□□ -0.29
CLPB-201ENST00000294053 TBC1D1Q86TI0 1168 aaPredicted RBP13.22□□□□□ -0.29
CLPB-201ENST00000294053 TAX1BP1Q86VP1 789 aa13.22□□□□□ -0.29
CLPB-201ENST00000294053 FAM163AQ96GL9 167 aaPredicted RBP13.22□□□□□ -0.29
CLPB-201ENST00000294053 ZNF287Q9HBT7 754 aa13.22□□□□□ -0.29
CLPB-201ENST00000294053 HYOU1Q9Y4L1 999 aa13.22□□□□□ -0.29
CLPB-201ENST00000294053 CCDC189A1A4V9 331 aa13.21□□□□□ -0.29
CLPB-201ENST00000294053 H7C1D1 291 aa13.21□□□□□ -0.29
CLPB-201ENST00000294053 GCOM1H8Y6P7 765 aaPredicted RBP13.21□□□□□ -0.29
CLPB-201ENST00000294053 MYZAPP0CAP1 466 aa13.21□□□□□ -0.29
CLPB-201ENST00000294053 CTNNA1P35221 906 aaKnown RBP13.21□□□□□ -0.29
CLPB-201ENST00000294053 PAK2Q13177 524 aa13.21□□□□□ -0.29
CLPB-201ENST00000294053 SOGA3Q5TF21 947 aa13.21□□□□□ -0.29
CLPB-201ENST00000294053 ZNF772Q68DY9 489 aaPredicted RBP13.21□□□□□ -0.29
CLPB-201ENST00000294053 DYMQ7RTS9 669 aa13.21□□□□□ -0.29
CLPB-201ENST00000294053 COL23A1Q86Y22 540 aaPredicted RBP13.21□□□□□ -0.29
CLPB-201ENST00000294053 KIAA0825Q8IV33 1275 aa13.21□□□□□ -0.29
CLPB-201ENST00000294053 CACNA2D3Q8IZS8 1091 aa13.21□□□□□ -0.29
CLPB-201ENST00000294053 FUKQ8N0W3 1084 aa13.21□□□□□ -0.29
CLPB-201ENST00000294053 GLIS3Q8NEA6 775 aa13.21□□□□□ -0.29
CLPB-201ENST00000294053 ZC3H12CQ9C0D7 883 aaKnown RBP13.21□□□□□ -0.29
CLPB-201ENST00000294053 C6orf50Q9HD87 102 aa13.21□□□□□ -0.29
CLPB-201ENST00000294053 CAPN11Q9UMQ6 739 aa13.21□□□□□ -0.29
CLPB-201ENST00000294053 NOVA2Q9UNW9 492 aaKnown RBP13.21□□□□□ -0.29
CLPB-201ENST00000294053 ANKRD31Q8N7Z5 1873 aa13.21□□□□□ -0.29
CLPB-201ENST00000294053 TNNI2P48788 182 aa13.21□□□□□ -0.29
CLPB-201ENST00000294053 SNAP25P60880 206 aa13.21□□□□□ -0.29
CLPB-201ENST00000294053 ASIC1P78348 528 aa13.21□□□□□ -0.29
CLPB-201ENST00000294053 GFPT1Q06210 699 aaPredicted RBP13.21□□□□□ -0.29
CLPB-201ENST00000294053 IFFO1Q0D2I5 559 aa13.21□□□□□ -0.29
CLPB-201ENST00000294053 CDC42EP5Q6NZY7 148 aa13.21□□□□□ -0.29
CLPB-201ENST00000294053 UHMK1Q8TAS1 419 aaKnown RBP13.21□□□□□ -0.29
CLPB-201ENST00000294053 MDM1Q8TC05 714 aa13.21□□□□□ -0.29
CLPB-201ENST00000294053 RSRC1Q96IZ7 334 aaKnown RBP13.21□□□□□ -0.29
CLPB-201ENST00000294053 TRIM9Q9C026 710 aa13.21□□□□□ -0.29
CLPB-201ENST00000294053 GOLPH3Q9H4A6 298 aa13.21□□□□□ -0.29
CLPB-201ENST00000294053 KIF9Q9HAQ2 790 aa13.21□□□□□ -0.29
CLPB-201ENST00000294053 GOPCQ9HD26 462 aa13.21□□□□□ -0.29
CLPB-201ENST00000294053 SLC39A2Q9NP94 309 aa13.21□□□□□ -0.29
CLPB-201ENST00000294053 ZNF263O14978 683 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms