RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 CYP11B2P19099 503 aa16.66■□□□□ 0.26
CCDC116-201ENST00000292779 HERC4Q5GLZ8 1057 aaPredicted RBP16.66■□□□□ 0.26
CCDC116-201ENST00000292779 LARGE2Q8N3Y3 721 aa16.66■□□□□ 0.26
CCDC116-201ENST00000292779 MBOAT7Q96N66 472 aa16.66■□□□□ 0.26
CCDC116-201ENST00000292779 SPON1Q9HCB6 807 aa16.66■□□□□ 0.26
CCDC116-201ENST00000292779 F5H6K3 240 aa16.65■□□□□ 0.26
CCDC116-201ENST00000292779 TACC1O75410 805 aa16.65■□□□□ 0.26
CCDC116-201ENST00000292779 KLRC3Q07444 240 aa16.65■□□□□ 0.26
CCDC116-201ENST00000292779 GPS2Q13227 327 aa16.65■□□□□ 0.26
CCDC116-201ENST00000292779 TMEM179Q6ZVK1 233 aa16.65■□□□□ 0.26
CCDC116-201ENST00000292779 SLFN12Q8IYM2 578 aa16.65■□□□□ 0.26
CCDC116-201ENST00000292779 MSL3Q8N5Y2 521 aaKnown RBP16.65■□□□□ 0.26
CCDC116-201ENST00000292779 CEP63Q96MT8 703 aa16.65■□□□□ 0.26
CCDC116-201ENST00000292779 FHDC1Q9C0D6 1143 aaPredicted RBP16.65■□□□□ 0.26
CCDC116-201ENST00000292779 NLRC4Q9NPP4 1024 aa16.65■□□□□ 0.26
CCDC116-201ENST00000292779 SERPINA10Q9UK55 444 aa16.65■□□□□ 0.26
CCDC116-201ENST00000292779 JRKLQ9Y4A0 524 aa16.65■□□□□ 0.26
CCDC116-201ENST00000292779 POTEFA5A3E0 1075 aa16.65■□□□□ 0.26
CCDC116-201ENST00000292779 EIF3JO75822 258 aaKnown RBP16.65■□□□□ 0.26
CCDC116-201ENST00000292779 POTEIP0CG38 1075 aa16.65■□□□□ 0.26
CCDC116-201ENST00000292779 ARHGAP4P98171 946 aa16.65■□□□□ 0.26
CCDC116-201ENST00000292779 AP3B2Q13367 1082 aa16.65■□□□□ 0.26
CCDC116-201ENST00000292779 PRR16Q569H4 304 aa16.65■□□□□ 0.26
CCDC116-201ENST00000292779 ARSHQ5FYA8 562 aa16.65■□□□□ 0.26
CCDC116-201ENST00000292779 POTEGQ6S5H5 508 aa16.65■□□□□ 0.26
CCDC116-201ENST00000292779 POTEEQ6S8J3 1075 aa16.65■□□□□ 0.26
CCDC116-201ENST00000292779 SCFD1Q8WVM8 642 aa16.65■□□□□ 0.26
CCDC116-201ENST00000292779 CRYGNQ8WXF5 182 aa16.65■□□□□ 0.26
CCDC116-201ENST00000292779 DRC1Q96MC2 740 aa16.65■□□□□ 0.26
CCDC116-201ENST00000292779 EDEM3Q9BZQ6 932 aa16.65■□□□□ 0.26
CCDC116-201ENST00000292779 TDRD3Q9H7E2 651 aaKnown RBP16.65■□□□□ 0.26
CCDC116-201ENST00000292779 SNX12Q9UMY4 172 aa16.65■□□□□ 0.26
CCDC116-201ENST00000292779 ZBTB12Q9Y330 459 aaPredicted RBP16.65■□□□□ 0.26
CCDC116-201ENST00000292779 N4BP1O75113 896 aaKnown RBP16.64■□□□□ 0.25
CCDC116-201ENST00000292779 NOL4O94818 638 aa16.64■□□□□ 0.25
CCDC116-201ENST00000292779 SLC12A3P55017 1021 aa16.64■□□□□ 0.25
CCDC116-201ENST00000292779 GFPT1Q06210 699 aaPredicted RBP16.64■□□□□ 0.25
CCDC116-201ENST00000292779 ABCB5Q2M3G0 1257 aa16.64■□□□□ 0.25
CCDC116-201ENST00000292779 ASTE1Q2TB18 679 aaPredicted RBP16.64■□□□□ 0.25
CCDC116-201ENST00000292779 ETNPPLQ8TBG4 499 aa16.64■□□□□ 0.25
CCDC116-201ENST00000292779 KCTD10Q9H3F6 313 aa16.64■□□□□ 0.25
CCDC116-201ENST00000292779 EMILIN3Q9NT22 766 aa16.64■□□□□ 0.25
CCDC116-201ENST00000292779 ATAD5Q96QE3 1844 aa16.64■□□□□ 0.25
CCDC116-201ENST00000292779 LRRIQ3A6PVS8 624 aaPredicted RBP16.63■□□□□ 0.25
CCDC116-201ENST00000292779 SLC26A4O43511 780 aa16.63■□□□□ 0.25
CCDC116-201ENST00000292779 KRT18P05783 430 aaKnown RBP16.63■□□□□ 0.25
CCDC116-201ENST00000292779 MAGEA1P43355 309 aa16.63■□□□□ 0.25
CCDC116-201ENST00000292779 JAG1P78504 1218 aa16.63■□□□□ 0.25
CCDC116-201ENST00000292779 SPIRE1Q08AE8 756 aa16.63■□□□□ 0.25
CCDC116-201ENST00000292779 USH1GQ495M9 461 aa16.63■□□□□ 0.25
CCDC116-201ENST00000292779 HGSNATQ68CP4 663 aa16.63■□□□□ 0.25
CCDC116-201ENST00000292779 MOXD1Q6UVY6 613 aa16.63■□□□□ 0.25
CCDC116-201ENST00000292779 CATSPER3Q86XQ3 398 aa16.63■□□□□ 0.25
CCDC116-201ENST00000292779 SUPT20HQ8NEM7 779 aa16.63■□□□□ 0.25
CCDC116-201ENST00000292779 AMNQ9BXJ7 453 aa16.63■□□□□ 0.25
CCDC116-201ENST00000292779 ZHX3Q9H4I2 956 aa16.63■□□□□ 0.25
CCDC116-201ENST00000292779 CEP72Q9P209 647 aa16.63■□□□□ 0.25
CCDC116-201ENST00000292779 SHTN1A0MZ66 631 aa16.63■□□□□ 0.25
CCDC116-201ENST00000292779 TARSL2A2RTX5 802 aaKnown RBP16.63■□□□□ 0.25
CCDC116-201ENST00000292779 NPM3O75607 178 aaKnown RBP16.63■□□□□ 0.25
CCDC116-201ENST00000292779 NDUFB10O96000 172 aa16.63■□□□□ 0.25
CCDC116-201ENST00000292779 TAL1P17542 331 aaPredicted RBP16.63■□□□□ 0.25
CCDC116-201ENST00000292779 C2orf54Q08AI8 447 aa16.63■□□□□ 0.25
CCDC116-201ENST00000292779 IKQ13123 557 aaPredicted RBP16.63■□□□□ 0.25
CCDC116-201ENST00000292779 CREG2Q8IUH2 290 aa16.63■□□□□ 0.25
CCDC116-201ENST00000292779 TRIM59Q8IWR1 403 aa16.63■□□□□ 0.25
CCDC116-201ENST00000292779 CRACR2AQ9BSW2 395 aa16.63■□□□□ 0.25
CCDC116-201ENST00000292779 LSM14BQ9BX40 385 aaKnown RBP16.63■□□□□ 0.25
CCDC116-201ENST00000292779 SALL4Q9UJQ4 1053 aa16.63■□□□□ 0.25
CCDC116-201ENST00000292779 ADAM21Q9UKJ8 722 aa16.63■□□□□ 0.25
CCDC116-201ENST00000292779 SSU72P8A0A1W2PR75 194 aa16.62■□□□□ 0.25
CCDC116-201ENST00000292779 FRMD3A2A2Y4 597 aa16.62■□□□□ 0.25
CCDC116-201ENST00000292779 CCDC66A2RUB6 948 aa16.62■□□□□ 0.25
CCDC116-201ENST00000292779 GNA14O95837 355 aa16.62■□□□□ 0.25
CCDC116-201ENST00000292779 MCM3P25205 808 aa16.62■□□□□ 0.25
CCDC116-201ENST00000292779 MARSP56192 900 aaKnown RBP16.62■□□□□ 0.25
CCDC116-201ENST00000292779 PSMC6P62333 389 aa16.62■□□□□ 0.25
CCDC116-201ENST00000292779 APBA1Q02410 837 aa16.62■□□□□ 0.25
CCDC116-201ENST00000292779 MAPK8IP2Q13387 824 aaPredicted RBP16.62■□□□□ 0.25
CCDC116-201ENST00000292779 TDRD12Q587J7 1177 aaKnown RBP16.62■□□□□ 0.25
CCDC116-201ENST00000292779 FAM83BQ5T0W9 1011 aa16.62■□□□□ 0.25
CCDC116-201ENST00000292779 HAUS3Q68CZ6 603 aa16.62■□□□□ 0.25
CCDC116-201ENST00000292779 FBXO11Q86XK2 927 aa16.62■□□□□ 0.25
CCDC116-201ENST00000292779 ANKRD13CQ8N6S4 541 aa16.62■□□□□ 0.25
CCDC116-201ENST00000292779 GMCL1P1Q8NEA9 526 aa16.62■□□□□ 0.25
CCDC116-201ENST00000292779 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.62■□□□□ 0.25
CCDC116-201ENST00000292779 SMCHD1A6NHR9 2005 aa16.62■□□□□ 0.25
CCDC116-201ENST00000292779 MEIS1O00470 390 aa16.62■□□□□ 0.25
CCDC116-201ENST00000292779 PJA2O43164 708 aa16.62■□□□□ 0.25
CCDC116-201ENST00000292779 TLR2O60603 784 aa16.62■□□□□ 0.25
CCDC116-201ENST00000292779 ZMYND10O75800 440 aa16.62■□□□□ 0.25
CCDC116-201ENST00000292779 GH2P01242 217 aa16.62■□□□□ 0.25
CCDC116-201ENST00000292779 POLR2FP61218 127 aaKnown RBP16.62■□□□□ 0.25
CCDC116-201ENST00000292779 ARHGAP27Q6ZUM4 889 aa16.62■□□□□ 0.25
CCDC116-201ENST00000292779 COG1Q8WTW3 980 aa16.62■□□□□ 0.25
CCDC116-201ENST00000292779 LENG9Q96B70 501 aa16.62■□□□□ 0.25
CCDC116-201ENST00000292779 PRMT6Q96LA8 375 aaPredicted RBP16.62■□□□□ 0.25
CCDC116-201ENST00000292779 VPS18Q9P253 973 aa16.62■□□□□ 0.25
CCDC116-201ENST00000292779 PITPNM2Q9BZ72 1349 aa16.62■□□□□ 0.25
CCDC116-201ENST00000292779 FAM86B1E9PN63 330 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms