RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 PPP1R18Q6NYC8 613 aa11.19□□□□□ -0.62
CCDC58-201ENST00000291458 KCNV1Q6PIU1 500 aa11.19□□□□□ -0.62
CCDC58-201ENST00000291458 RUFY3Q7L099 469 aa11.19□□□□□ -0.62
CCDC58-201ENST00000291458 C16orf59Q7L2K0 433 aa11.19□□□□□ -0.62
CCDC58-201ENST00000291458 EMID1Q96A84 441 aaPredicted RBP11.19□□□□□ -0.62
CCDC58-201ENST00000291458 KATNAL1Q9BW62 490 aa11.19□□□□□ -0.62
CCDC58-201ENST00000291458 CXXC1Q9P0U4 656 aaPredicted RBP11.19□□□□□ -0.62
CCDC58-201ENST00000291458 KAT6AQ92794 2004 aa11.18□□□□□ -0.62
CCDC58-201ENST00000291458 CCDC196A0A1B0GTZ2 297 aa11.18□□□□□ -0.62
CCDC58-201ENST00000291458 SPATA31C2B4DYI2 1134 aa11.18□□□□□ -0.62
CCDC58-201ENST00000291458 DDX39AO00148 427 aaKnown RBP11.18□□□□□ -0.62
CCDC58-201ENST00000291458 ADAMTS3O15072 1205 aa11.18□□□□□ -0.62
CCDC58-201ENST00000291458 F2P00734 622 aa11.18□□□□□ -0.62
CCDC58-201ENST00000291458 ITGB5P18084 799 aa11.18□□□□□ -0.62
CCDC58-201ENST00000291458 MARK3P27448 753 aa11.18□□□□□ -0.62
CCDC58-201ENST00000291458 PBX2P40425 430 aa11.18□□□□□ -0.62
CCDC58-201ENST00000291458 MLLT3P42568 568 aaPredicted RBP11.18□□□□□ -0.62
CCDC58-201ENST00000291458 MTMR1Q13613 665 aa11.18□□□□□ -0.62
CCDC58-201ENST00000291458 NEDD9Q14511 834 aa11.18□□□□□ -0.62
CCDC58-201ENST00000291458 RETREG2Q8NC44 543 aa11.18□□□□□ -0.62
CCDC58-201ENST00000291458 RASGRP4Q8TDF6 673 aa11.18□□□□□ -0.62
CCDC58-201ENST00000291458 DHX38Q92620 1227 aaKnown RBP11.18□□□□□ -0.62
CCDC58-201ENST00000291458 WNT8BQ93098 351 aa11.18□□□□□ -0.62
CCDC58-201ENST00000291458 FTOQ9C0B1 505 aaKnown RBP eCLIP11.18□□□□□ -0.62
CCDC58-201ENST00000291458 RIC8AQ9NPQ8 531 aa11.18□□□□□ -0.62
CCDC58-201ENST00000291458 PDRG1Q9NUG6 133 aa11.18□□□□□ -0.62
CCDC58-201ENST00000291458 BARHL2Q9NY43 387 aa11.18□□□□□ -0.62
CCDC58-201ENST00000291458 VPS54Q9P1Q0 977 aa11.18□□□□□ -0.62
CCDC58-201ENST00000291458 GTF2IRD1Q9UHL9 959 aa11.18□□□□□ -0.62
CCDC58-201ENST00000291458 TET1Q8NFU7 2136 aa11.18□□□□□ -0.62
CCDC58-201ENST00000291458 CPLX1O14810 134 aa11.17□□□□□ -0.62
CCDC58-201ENST00000291458 ATP9AO75110 1047 aa11.17□□□□□ -0.62
CCDC58-201ENST00000291458 STAM2O75886 525 aa11.17□□□□□ -0.62
CCDC58-201ENST00000291458 FGBP02675 491 aa11.17□□□□□ -0.62
CCDC58-201ENST00000291458 CTSHP09668 335 aa11.17□□□□□ -0.62
CCDC58-201ENST00000291458 SMIM10L2AP0DMW4 78 aa11.17□□□□□ -0.62
CCDC58-201ENST00000291458 SMIM10L2BP0DMW5 78 aa11.17□□□□□ -0.62
CCDC58-201ENST00000291458 DNAJB2P25686 324 aa11.17□□□□□ -0.62
CCDC58-201ENST00000291458 PDIA3P30101 505 aaKnown RBP11.17□□□□□ -0.62
CCDC58-201ENST00000291458 ICAM3P32942 547 aa11.17□□□□□ -0.62
CCDC58-201ENST00000291458 ZNF76P36508 570 aa11.17□□□□□ -0.62
CCDC58-201ENST00000291458 RABGGTBP53611 331 aa11.17□□□□□ -0.62
CCDC58-201ENST00000291458 RCAN1P53805 252 aa11.17□□□□□ -0.62
CCDC58-201ENST00000291458 PTPN11Q06124 597 aaPredicted RBP11.17□□□□□ -0.62
CCDC58-201ENST00000291458 BFSP2Q13515 415 aa11.17□□□□□ -0.62
CCDC58-201ENST00000291458 HIC1Q14526 733 aa11.17□□□□□ -0.62
CCDC58-201ENST00000291458 PFKFB3Q16875 520 aaPredicted RBP11.17□□□□□ -0.62
CCDC58-201ENST00000291458 ERICH6BQ5W0A0 696 aa11.17□□□□□ -0.62
CCDC58-201ENST00000291458 METTL7BQ6UX53 244 aa11.17□□□□□ -0.62
CCDC58-201ENST00000291458 CCDC155Q8N6L0 562 aa11.17□□□□□ -0.62
CCDC58-201ENST00000291458 CYP2W1Q8TAV3 490 aa11.17□□□□□ -0.62
CCDC58-201ENST00000291458 GUCD1Q96NT3 240 aa11.17□□□□□ -0.62
CCDC58-201ENST00000291458 GPR20Q99678 358 aa11.17□□□□□ -0.62
CCDC58-201ENST00000291458 SEZ6LQ9BYH1 1024 aa11.17□□□□□ -0.62
CCDC58-201ENST00000291458 MTMR10Q9NXD2 777 aa11.17□□□□□ -0.62
CCDC58-201ENST00000291458 PTPRSQ13332 1948 aa11.17□□□□□ -0.62
CCDC58-201ENST00000291458 NID2Q14112 1375 aa11.16□□□□□ -0.62
CCDC58-201ENST00000291458 RANBP2P49792 3224 aaKnown RBP11.16□□□□□ -0.62
CCDC58-201ENST00000291458 C17orf102A2RUQ5 167 aa11.16□□□□□ -0.62
CCDC58-201ENST00000291458 H3BRB1 525 aa11.16□□□□□ -0.62
CCDC58-201ENST00000291458 hCG_1984214I3L0E3 225 aa11.16□□□□□ -0.62
CCDC58-201ENST00000291458 HAS3O00219 553 aa11.16□□□□□ -0.62
CCDC58-201ENST00000291458 IQCF3P0C7M6 154 aa11.16□□□□□ -0.62
CCDC58-201ENST00000291458 TGFB3P10600 412 aa11.16□□□□□ -0.62
CCDC58-201ENST00000291458 KCNA2P16389 499 aa11.16□□□□□ -0.62
CCDC58-201ENST00000291458 TCF7P36402 384 aaPredicted RBP11.16□□□□□ -0.62
CCDC58-201ENST00000291458 SMAD3P84022 425 aaKnown RBP11.16□□□□□ -0.62
CCDC58-201ENST00000291458 PKN1Q16512 942 aa11.16□□□□□ -0.62
CCDC58-201ENST00000291458 XRRA1Q6P2D8 792 aa11.16□□□□□ -0.62
CCDC58-201ENST00000291458 ZNF713Q8N859 430 aaPredicted RBP11.16□□□□□ -0.62
CCDC58-201ENST00000291458 MYLIPQ8WY64 445 aa11.16□□□□□ -0.62
CCDC58-201ENST00000291458 GPRASP2Q96D09 838 aa11.16□□□□□ -0.62
CCDC58-201ENST00000291458 CTAGE1Q96RT6 745 aa11.16□□□□□ -0.62
CCDC58-201ENST00000291458 C16orf70Q9BSU1 422 aa11.16□□□□□ -0.62
CCDC58-201ENST00000291458 MTIF3Q9H2K0 278 aaKnown RBP11.16□□□□□ -0.62
CCDC58-201ENST00000291458 NKX2-4Q9H2Z4 354 aa11.16□□□□□ -0.62
CCDC58-201ENST00000291458 TTYH1Q9H313 450 aaPredicted RBP11.16□□□□□ -0.62
CCDC58-201ENST00000291458 TUT1Q9H6E5 874 aaKnown RBP11.16□□□□□ -0.62
CCDC58-201ENST00000291458 ZNF215Q9UL58 517 aaPredicted RBP11.16□□□□□ -0.62
CCDC58-201ENST00000291458 UBIAD1Q9Y5Z9 338 aa11.16□□□□□ -0.62
CCDC58-201ENST00000291458 SIP14410 1827 aa11.15□□□□□ -0.62
CCDC58-201ENST00000291458 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.15□□□□□ -0.62
CCDC58-201ENST00000291458 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.15□□□□□ -0.62
CCDC58-201ENST00000291458 PRPF3O43395 683 aaKnown RBP11.15□□□□□ -0.62
CCDC58-201ENST00000291458 PPFIA4O75335 1185 aa11.15□□□□□ -0.62
CCDC58-201ENST00000291458 ARP10275 920 aa11.15□□□□□ -0.62
CCDC58-201ENST00000291458 HOXD8P13378 290 aaPredicted RBP11.15□□□□□ -0.62
CCDC58-201ENST00000291458 MYOGP15173 224 aa11.15□□□□□ -0.62
CCDC58-201ENST00000291458 THPOP40225 353 aa11.15□□□□□ -0.62
CCDC58-201ENST00000291458 ARHGAP4P98171 946 aa11.15□□□□□ -0.62
CCDC58-201ENST00000291458 SSRP1Q08945 709 aaKnown RBP11.15□□□□□ -0.62
CCDC58-201ENST00000291458 LRRC8DQ7L1W4 858 aa11.15□□□□□ -0.62
CCDC58-201ENST00000291458 TRIM22Q8IYM9 498 aa11.15□□□□□ -0.62
CCDC58-201ENST00000291458 RPUSD2Q8IZ73 545 aaKnown RBP11.15□□□□□ -0.62
CCDC58-201ENST00000291458 REXO1Q8N1G1 1221 aaKnown RBP11.15□□□□□ -0.62
CCDC58-201ENST00000291458 HERVK_113Q902F9 699 aa11.15□□□□□ -0.62
CCDC58-201ENST00000291458 GLG1Q92896 1179 aa11.15□□□□□ -0.62
CCDC58-201ENST00000291458 ATP6V0A1Q93050 837 aa11.15□□□□□ -0.62
CCDC58-201ENST00000291458 TIFAQ96CG3 184 aa11.15□□□□□ -0.62
CCDC58-201ENST00000291458 AIFM3Q96NN9 605 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms