RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 LONRF3Q496Y0 759 aa12.84□□□□□ -0.35
CHRNB3-201ENST00000289957 PLEKHH3Q7Z736 793 aa12.84□□□□□ -0.35
CHRNB3-201ENST00000289957 SHCBP1Q8NEM2 672 aa12.84□□□□□ -0.35
CHRNB3-201ENST00000289957 TRIM47Q96LD4 638 aa12.84□□□□□ -0.35
CHRNB3-201ENST00000289957 VAV3Q9UKW4 847 aa12.84□□□□□ -0.35
CHRNB3-201ENST00000289957 GABRQQ9UN88 632 aa12.84□□□□□ -0.35
CHRNB3-201ENST00000289957 POLR2DO15514 142 aaKnown RBP12.83□□□□□ -0.35
CHRNB3-201ENST00000289957 DHX15O43143 795 aaKnown RBP12.83□□□□□ -0.35
CHRNB3-201ENST00000289957 IGSF22Q8N9C0 903 aa12.83□□□□□ -0.35
CHRNB3-201ENST00000289957 ZNF577Q9BSK1 485 aa12.83□□□□□ -0.35
CHRNB3-201ENST00000289957 XPO4Q9C0E2 1151 aaKnown RBP12.83□□□□□ -0.35
CHRNB3-201ENST00000289957 DDX41Q9UJV9 622 aaKnown RBP12.83□□□□□ -0.35
CHRNB3-201ENST00000289957 IPO5O00410 1097 aaKnown RBP12.83□□□□□ -0.36
CHRNB3-201ENST00000289957 GCFC2P16383 781 aaKnown RBP12.83□□□□□ -0.36
CHRNB3-201ENST00000289957 EDNRBP24530 442 aa12.83□□□□□ -0.36
CHRNB3-201ENST00000289957 CCND2P30279 289 aa12.83□□□□□ -0.36
CHRNB3-201ENST00000289957 GABPB1Q06547 395 aaPredicted RBP12.83□□□□□ -0.36
CHRNB3-201ENST00000289957 PRAMEF19Q5SWL8 479 aa12.83□□□□□ -0.36
CHRNB3-201ENST00000289957 ARL6IP4Q66PJ3 421 aaKnown RBP12.83□□□□□ -0.36
CHRNB3-201ENST00000289957 KCNK18Q7Z418 384 aa12.83□□□□□ -0.36
CHRNB3-201ENST00000289957 FILIP1Q7Z7B0 1213 aa12.83□□□□□ -0.36
CHRNB3-201ENST00000289957 GTF3C2Q8WUA4 911 aaPredicted RBP12.83□□□□□ -0.36
CHRNB3-201ENST00000289957 INPP4AQ96PE3 977 aaPredicted RBP12.83□□□□□ -0.36
CHRNB3-201ENST00000289957 AGO4Q9HCK5 861 aaKnown RBP12.83□□□□□ -0.36
CHRNB3-201ENST00000289957 JADE2Q9NQC1 790 aa12.83□□□□□ -0.36
CHRNB3-201ENST00000289957 MAP3K20Q9NYL2 800 aaKnown RBP12.83□□□□□ -0.36
CHRNB3-201ENST00000289957 PNMA2Q9UL42 364 aa12.83□□□□□ -0.36
CHRNB3-201ENST00000289957 KCNH3Q9ULD8 1083 aa12.83□□□□□ -0.36
CHRNB3-201ENST00000289957 PCDHA12Q9UN75 941 aa12.83□□□□□ -0.36
CHRNB3-201ENST00000289957 IVNS1ABPQ9Y6Y0 642 aa12.83□□□□□ -0.36
CHRNB3-201ENST00000289957 ZBTB39O15060 712 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 MARCH6O60337 910 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 PSMD10O75832 226 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 SLU7O95391 586 aaKnown RBP12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 CYP2B6P20813 491 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 SFPQP23246 707 aaKnown RBP eCLIP12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 CYP4A11Q02928 519 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 LY6KQ17RY6 165 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 MORN1Q5T089 497 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 NCAPH2Q6IBW4 605 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 ARMCX5Q6P1M9 558 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 TRMT1LQ7Z2T5 733 aaKnown RBP12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 COPS5Q92905 334 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 FERMT2Q96AC1 680 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 DHX58Q96C10 678 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 UNC45AQ9H3U1 944 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 ZCCHC17Q9NP64 241 aaKnown RBP12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 RGL1Q9NZL6 768 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 IFNKQ9P0W0 207 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 WRAP73Q9P2S5 460 aaPredicted RBP12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 PHLPP2Q6ZVD8 1323 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 ADCY6O43306 1168 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 PRPHP41219 470 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 SYKP43405 635 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 C1QTNF8P60827 252 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 LACTBP83111 547 aaPredicted RBP12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 MYL5Q02045 173 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 LRCH2Q5VUJ6 765 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 E4F1Q66K89 784 aaPredicted RBP12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 MOXD1Q6UVY6 613 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 ARMCX2Q7L311 632 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 DPP9Q86TI2 863 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 DNERQ8NFT8 737 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 SLC5A5Q92911 643 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 LENG1Q96BZ8 264 aaPredicted RBP12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 MAML3Q96JK9 1138 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 PPP1R13BQ96KQ4 1090 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 MTRQ99707 1265 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 FAM53CQ9NYF3 392 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 SERTAD1Q9UHV2 236 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 GJD2Q9UKL4 321 aa12.82□□□□□ -0.36
CHRNB3-201ENST00000289957 MGAMO43451 1857 aa12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 MED24O75448 989 aa12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 SNAI1O95863 264 aaPredicted RBP12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 CCNE2O96020 404 aa12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 PRR29P0C7W0 189 aa12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 MAPK4P31152 587 aa12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 PSMC4P43686 418 aa12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 FXR2P51116 673 aaKnown RBP eCLIP12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 IRX5P78411 483 aaPredicted RBP12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 PDE4DQ08499 809 aa12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 NAALADL2Q58DX5 795 aa12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 OTOP1Q7RTM1 612 aa12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 TMC6Q7Z403 805 aa12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 HSD3B7Q9H2F3 369 aa12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 EHMT1Q9H9B1 1298 aa12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 LRWD1Q9UFC0 647 aa12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 POTEB3A0JP26 581 aa12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 TNPO2O14787 897 aaKnown RBP12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 KIF20AO95235 890 aa12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 SMC2O95347 1197 aa12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 BMP15O95972 392 aa12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 KCNA2P16389 499 aa12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 CYP2C19P33261 490 aa12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 CBX1P83916 185 aa12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 FANCCQ00597 558 aa12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 STXBP2Q15833 593 aa12.81□□□□□ -0.36
CHRNB3-201ENST00000289957 MCTP2Q6DN12 878 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms