RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 SPA17Q15506 151 aa11.57□□□□□ -0.56
ERCC3-201ENST00000285398 SPDYE2Q495Y8 402 aa11.57□□□□□ -0.56
ERCC3-201ENST00000285398 ZNF658Q5TYW1 1059 aaPredicted RBP11.57□□□□□ -0.56
ERCC3-201ENST00000285398 PPP4R3AQ6IN85 833 aa11.57□□□□□ -0.56
ERCC3-201ENST00000285398 ZNF654Q8IZM8 581 aa11.57□□□□□ -0.56
ERCC3-201ENST00000285398 RETREG2Q8NC44 543 aa11.57□□□□□ -0.56
ERCC3-201ENST00000285398 CEP95Q96GE4 821 aa11.57□□□□□ -0.56
ERCC3-201ENST00000285398 CPVLQ9H3G5 476 aa11.57□□□□□ -0.56
ERCC3-201ENST00000285398 ATP6V0A4Q9HBG4 840 aa11.57□□□□□ -0.56
ERCC3-201ENST00000285398 TMOD2Q9NZR1 351 aa11.57□□□□□ -0.56
ERCC3-201ENST00000285398 MYH1P12882 1939 aa11.57□□□□□ -0.56
ERCC3-201ENST00000285398 RCCD1A6NED2 376 aa11.57□□□□□ -0.56
ERCC3-201ENST00000285398 E7EVH7 732 aa11.57□□□□□ -0.56
ERCC3-201ENST00000285398 HLA-DOAP06340 250 aa11.57□□□□□ -0.56
ERCC3-201ENST00000285398 PARP1P09874 1014 aaKnown RBP11.57□□□□□ -0.56
ERCC3-201ENST00000285398 EEF1GP26641 437 aaKnown RBP11.57□□□□□ -0.56
ERCC3-201ENST00000285398 MATR3P43243 847 aaKnown RBP eCLIP11.57□□□□□ -0.56
ERCC3-201ENST00000285398 HIRAP54198 1017 aaPredicted RBP11.57□□□□□ -0.56
ERCC3-201ENST00000285398 CCDC84Q86UT8 332 aaPredicted RBP11.57□□□□□ -0.56
ERCC3-201ENST00000285398 TAX1BP1Q86VP1 789 aa11.57□□□□□ -0.56
ERCC3-201ENST00000285398 FUKQ8N0W3 1084 aa11.57□□□□□ -0.56
ERCC3-201ENST00000285398 ATP6V1G3Q96LB4 118 aa11.57□□□□□ -0.56
ERCC3-201ENST00000285398 CCDC43Q96MW1 224 aaKnown RBP11.57□□□□□ -0.56
ERCC3-201ENST00000285398 HYOU1Q9Y4L1 999 aa11.57□□□□□ -0.56
ERCC3-201ENST00000285398 CNTNAP1P78357 1384 aa11.57□□□□□ -0.56
ERCC3-201ENST00000285398 ZNF233A6NK53 670 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 GTPBP6O43824 516 aaPredicted RBP11.56□□□□□ -0.56
ERCC3-201ENST00000285398 GOLGA8HP0CJ92 632 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 TRIM21P19474 475 aaKnown RBP11.56□□□□□ -0.56
ERCC3-201ENST00000285398 PAX7P23759 505 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 DNM2P50570 870 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 RASA3Q14644 834 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 HAUS3Q68CZ6 603 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 LRRC47Q8N1G4 583 aaKnown RBP11.56□□□□□ -0.56
ERCC3-201ENST00000285398 SHISA4Q96DD7 197 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 ALS2CR12Q96Q35 445 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 OSBPL9Q96SU4 736 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 HACL1Q9UJ83 578 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 DUSP10Q9Y6W6 482 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 MYH6P13533 1939 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 XBP1P17861 261 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 SEC24CP53992 1094 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 PAK2Q13177 524 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 ZKSCAN8Q15776 578 aaPredicted RBP11.56□□□□□ -0.56
ERCC3-201ENST00000285398 CCDC96Q2M329 555 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 DDX60LQ5H9U9 1706 aaKnown RBP11.56□□□□□ -0.56
ERCC3-201ENST00000285398 ANGEL2Q5VTE6 544 aaKnown RBP11.56□□□□□ -0.56
ERCC3-201ENST00000285398 PDXDC2PQ6P474 469 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 MREGQ8N565 214 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 ZNF507Q8TCN5 953 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 MTA3Q9BTC8 594 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 RNF26Q9BY78 433 aaPredicted RBP11.56□□□□□ -0.56
ERCC3-201ENST00000285398 BLZF1Q9H2G9 400 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 GPRC5DQ9NZD1 345 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 VPS54Q9P1Q0 977 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 PI4KBQ9UBF8 816 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.56□□□□□ -0.56
ERCC3-201ENST00000285398 ROBO3Q96MS0 1386 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 GOLGA6L10A6NI86 522 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 PLEKHA8P1O95397 391 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 KRT2P35908 639 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 ZNF280AP59817 542 aaPredicted RBP11.56□□□□□ -0.56
ERCC3-201ENST00000285398 CDK17Q00537 523 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 EARS2Q5JPH6 523 aaKnown RBP11.56□□□□□ -0.56
ERCC3-201ENST00000285398 IRF2BP1Q8IU81 584 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 EGFL6Q8IUX8 553 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 GPC2Q8N158 579 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 STAMQ92783 540 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 CYFIP2Q96F07 1278 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 SCLT1Q96NL6 688 aa11.56□□□□□ -0.56
ERCC3-201ENST00000285398 MAGEC2Q9UBF1 373 aaPredicted RBP11.56□□□□□ -0.56
ERCC3-201ENST00000285398 SLC8A3P57103 927 aa11.55□□□□□ -0.56
ERCC3-201ENST00000285398 ZBED6P86452 979 aa11.55□□□□□ -0.56
ERCC3-201ENST00000285398 PRKG1Q13976 671 aa11.55□□□□□ -0.56
ERCC3-201ENST00000285398 ARMC9Q7Z3E5 817 aa11.55□□□□□ -0.56
ERCC3-201ENST00000285398 CCDC155Q8N6L0 562 aa11.55□□□□□ -0.56
ERCC3-201ENST00000285398 FANCBQ8NB91 859 aa11.55□□□□□ -0.56
ERCC3-201ENST00000285398 P3H4Q92791 437 aa11.55□□□□□ -0.56
ERCC3-201ENST00000285398 ZBED3Q96IU2 234 aaPredicted RBP11.55□□□□□ -0.56
ERCC3-201ENST00000285398 CCDC42Q96M95 316 aa11.55□□□□□ -0.56
ERCC3-201ENST00000285398 MTRQ99707 1265 aa11.55□□□□□ -0.56
ERCC3-201ENST00000285398 PHF20Q9BVI0 1012 aa11.55□□□□□ -0.56
ERCC3-201ENST00000285398 WNT7AO00755 349 aa11.55□□□□□ -0.56
ERCC3-201ENST00000285398 PDHBP11177 359 aa11.55□□□□□ -0.56
ERCC3-201ENST00000285398 GBP2P32456 591 aaPredicted RBP11.55□□□□□ -0.56
ERCC3-201ENST00000285398 ATP2C1P98194 919 aaPredicted RBP11.55□□□□□ -0.56
ERCC3-201ENST00000285398 TROAPQ12815 778 aa11.55□□□□□ -0.56
ERCC3-201ENST00000285398 ITGB3BPQ13352 177 aaPredicted RBP11.55□□□□□ -0.56
ERCC3-201ENST00000285398 TMTC2Q8N394 836 aa11.55□□□□□ -0.56
ERCC3-201ENST00000285398 STAG2Q8N3U4 1231 aa11.55□□□□□ -0.56
ERCC3-201ENST00000285398 KCTD17Q8N5Z5 321 aa11.55□□□□□ -0.56
ERCC3-201ENST00000285398 RSRC1Q96IZ7 334 aaKnown RBP11.55□□□□□ -0.56
ERCC3-201ENST00000285398 TMEM47Q9BQJ4 181 aa11.55□□□□□ -0.56
ERCC3-201ENST00000285398 THAP9Q9H5L6 903 aa11.55□□□□□ -0.56
ERCC3-201ENST00000285398 GGA3Q9NZ52 723 aa11.55□□□□□ -0.56
ERCC3-201ENST00000285398 SBF1O95248 1867 aa11.54□□□□□ -0.56
ERCC3-201ENST00000285398 CENPFP49454 3210 aa11.54□□□□□ -0.56
ERCC3-201ENST00000285398 GMNCA6NCL1 334 aa11.54□□□□□ -0.56
ERCC3-201ENST00000285398 RTN2O75298 545 aa11.54□□□□□ -0.56
ERCC3-201ENST00000285398 RPS12P25398 132 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms