RNA–Protein interactions for RNA: ENST00000284551.10

TRIM11-201, Transcript of tripartite motif containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM11, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-201ENST00000284551 DMGDHQ9UI17 866 aaKnown RBP18.36■□□□□ 0.53
TRIM11-201ENST00000284551 PRPF6O94906 941 aaKnown RBP18.36■□□□□ 0.53
TRIM11-201ENST00000284551 SPATA31C1P0DKV0 1188 aa18.36■□□□□ 0.53
TRIM11-201ENST00000284551 MYBP10242 640 aa18.36■□□□□ 0.53
TRIM11-201ENST00000284551 LMAN1P49257 510 aa18.36■□□□□ 0.53
TRIM11-201ENST00000284551 SLC12A3P55017 1021 aa18.36■□□□□ 0.53
TRIM11-201ENST00000284551 FKBP3Q00688 224 aaKnown RBP18.36■□□□□ 0.53
TRIM11-201ENST00000284551 TUBB2AQ13885 445 aa18.36■□□□□ 0.53
TRIM11-201ENST00000284551 ASTE1Q2TB18 679 aaPredicted RBP18.36■□□□□ 0.53
TRIM11-201ENST00000284551 PPP1R18Q6NYC8 613 aa18.36■□□□□ 0.53
TRIM11-201ENST00000284551 KSR1Q8IVT5 923 aa18.36■□□□□ 0.53
TRIM11-201ENST00000284551 ETNPPLQ8TBG4 499 aa18.36■□□□□ 0.53
TRIM11-201ENST00000284551 TUBB2BQ9BVA1 445 aa18.36■□□□□ 0.53
TRIM11-201ENST00000284551 GOLPH3Q9H4A6 298 aa18.36■□□□□ 0.53
TRIM11-201ENST00000284551 EMILIN3Q9NT22 766 aa18.36■□□□□ 0.53
TRIM11-201ENST00000284551 CALCOCO1Q9P1Z2 691 aa18.36■□□□□ 0.53
TRIM11-201ENST00000284551 EML1O00423 815 aa18.35■□□□□ 0.53
TRIM11-201ENST00000284551 RNASE9P60153 205 aaKnown RBP18.35■□□□□ 0.53
TRIM11-201ENST00000284551 FAM83BQ5T0W9 1011 aa18.35■□□□□ 0.53
TRIM11-201ENST00000284551 PRMT6Q96LA8 375 aaPredicted RBP18.35■□□□□ 0.53
TRIM11-201ENST00000284551 TSG101Q99816 390 aa18.35■□□□□ 0.53
TRIM11-201ENST00000284551 LRRC1Q9BTT6 524 aa18.35■□□□□ 0.53
TRIM11-201ENST00000284551 SUGT1Q9Y2Z0 365 aa18.35■□□□□ 0.53
TRIM11-201ENST00000284551 QSER1Q2KHR3 1735 aa18.35■□□□□ 0.53
TRIM11-201ENST00000284551 SEMA3FQ13275 785 aa18.35■□□□□ 0.53
TRIM11-201ENST00000284551 SFR1Q86XK3 245 aa18.35■□□□□ 0.53
TRIM11-201ENST00000284551 SNX12Q9UMY4 172 aa18.35■□□□□ 0.53
TRIM11-201ENST00000284551 CCDC84Q86UT8 332 aaPredicted RBP18.34■□□□□ 0.53
TRIM11-201ENST00000284551 FAM133AQ8N9E0 248 aa18.34■□□□□ 0.53
TRIM11-201ENST00000284551 REEP2Q9BRK0 252 aa18.34■□□□□ 0.53
TRIM11-201ENST00000284551 DHX36Q9H2U1 1008 aaKnown RBP18.34■□□□□ 0.53
TRIM11-201ENST00000284551 PI4KBQ9UBF8 816 aa18.34■□□□□ 0.53
TRIM11-201ENST00000284551 ERLIN1O75477 346 aa18.34■□□□□ 0.53
TRIM11-201ENST00000284551 SLC9A1P19634 815 aa18.34■□□□□ 0.53
TRIM11-201ENST00000284551 PPP1R2P41236 205 aa18.34■□□□□ 0.53
TRIM11-201ENST00000284551 NAP1L1P55209 391 aaKnown RBP18.34■□□□□ 0.53
TRIM11-201ENST00000284551 FAM193AP78312 1265 aa18.34■□□□□ 0.53
TRIM11-201ENST00000284551 CDK17Q00537 523 aa18.34■□□□□ 0.53
TRIM11-201ENST00000284551 ADAM9Q13443 819 aa18.34■□□□□ 0.53
TRIM11-201ENST00000284551 PIGOQ8TEQ8 1089 aa18.34■□□□□ 0.53
TRIM11-201ENST00000284551 IPO4Q8TEX9 1081 aaKnown RBP18.34■□□□□ 0.53
TRIM11-201ENST00000284551 CRYGNQ8WXF5 182 aa18.34■□□□□ 0.53
TRIM11-201ENST00000284551 AJAP1Q9UKB5 411 aaPredicted RBP18.34■□□□□ 0.53
TRIM11-201ENST00000284551 SLX4Q8IY92 1834 aa18.33■□□□□ 0.53
TRIM11-201ENST00000284551 FTCDO95954 541 aa18.33■□□□□ 0.53
TRIM11-201ENST00000284551 RAPGEF1Q13905 1077 aa18.33■□□□□ 0.53
TRIM11-201ENST00000284551 GIT2Q14161 759 aa18.33■□□□□ 0.53
TRIM11-201ENST00000284551 ZYXQ15942 572 aaKnown RBP18.33■□□□□ 0.53
TRIM11-201ENST00000284551 HYIQ5T013 277 aa18.33■□□□□ 0.53
TRIM11-201ENST00000284551 ZNF662Q6ZS27 426 aa18.33■□□□□ 0.53
TRIM11-201ENST00000284551 ACER1Q8TDN7 264 aa18.33■□□□□ 0.53
TRIM11-201ENST00000284551 MASTLQ96GX5 879 aa18.33■□□□□ 0.53
TRIM11-201ENST00000284551 A0A087X0T9 212 aa18.33■□□□□ 0.52
TRIM11-201ENST00000284551 CLRN2A0PK11 232 aa18.33■□□□□ 0.52
TRIM11-201ENST00000284551 POTEB2H3BUK9 544 aa18.33■□□□□ 0.52
TRIM11-201ENST00000284551 CLIC2O15247 247 aa18.33■□□□□ 0.52
TRIM11-201ENST00000284551 CHMP2AO43633 222 aa18.33■□□□□ 0.52
TRIM11-201ENST00000284551 FAM228BP0C875 321 aa18.33■□□□□ 0.52
TRIM11-201ENST00000284551 CASP4P49662 377 aa18.33■□□□□ 0.52
TRIM11-201ENST00000284551 ABCB5Q2M3G0 1257 aa18.33■□□□□ 0.52
TRIM11-201ENST00000284551 WDR93Q6P2C0 686 aa18.33■□□□□ 0.52
TRIM11-201ENST00000284551 GJB7Q6PEY0 223 aa18.33■□□□□ 0.52
TRIM11-201ENST00000284551 TRIM59Q8IWR1 403 aa18.33■□□□□ 0.52
TRIM11-201ENST00000284551 OSBPL9Q96SU4 736 aa18.33■□□□□ 0.52
TRIM11-201ENST00000284551 RUSC1Q9BVN2 902 aa18.33■□□□□ 0.52
TRIM11-201ENST00000284551 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.33■□□□□ 0.52
TRIM11-201ENST00000284551 MSH4O15457 936 aa18.32■□□□□ 0.52
TRIM11-201ENST00000284551 PSMD2Q13200 908 aa18.32■□□□□ 0.52
TRIM11-201ENST00000284551 NLGN1Q8N2Q7 840 aa18.32■□□□□ 0.52
TRIM11-201ENST00000284551 TLR10Q9BXR5 811 aa18.32■□□□□ 0.52
TRIM11-201ENST00000284551 EHD4Q9H223 541 aa18.32■□□□□ 0.52
TRIM11-201ENST00000284551 ADAMTS1Q9UHI8 967 aa18.32■□□□□ 0.52
TRIM11-201ENST00000284551 ZSCAN5CA6NGD5 496 aaPredicted RBP18.32■□□□□ 0.52
TRIM11-201ENST00000284551 NR2F2P24468 414 aa18.32■□□□□ 0.52
TRIM11-201ENST00000284551 ALDH1B1P30837 517 aa18.32■□□□□ 0.52
TRIM11-201ENST00000284551 CTTNQ14247 550 aaKnown RBP18.32■□□□□ 0.52
TRIM11-201ENST00000284551 CCDC65Q8IXS2 484 aa18.32■□□□□ 0.52
TRIM11-201ENST00000284551 MKL1Q969V6 931 aa18.32■□□□□ 0.52
TRIM11-201ENST00000284551 AKT1S1Q96B36 256 aa18.32■□□□□ 0.52
TRIM11-201ENST00000284551 CCDC17Q96LX7 622 aa18.32■□□□□ 0.52
TRIM11-201ENST00000284551 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.32■□□□□ 0.52
TRIM11-201ENST00000284551 BHMT2Q9H2M3 363 aa18.32■□□□□ 0.52
TRIM11-201ENST00000284551 NYAP2Q9P242 653 aa18.32■□□□□ 0.52
TRIM11-201ENST00000284551 ZC3H4Q9UPT8 1303 aaKnown RBP18.32■□□□□ 0.52
TRIM11-201ENST00000284551 TCP10L2B9ZVM9 353 aa18.31■□□□□ 0.52
TRIM11-201ENST00000284551 APBA3O96018 575 aa18.31■□□□□ 0.52
TRIM11-201ENST00000284551 GCFC2P16383 781 aaKnown RBP18.31■□□□□ 0.52
TRIM11-201ENST00000284551 KLRC1P26715 233 aa18.31■□□□□ 0.52
TRIM11-201ENST00000284551 KLHDC7AQ5VTJ3 777 aa18.31■□□□□ 0.52
TRIM11-201ENST00000284551 TATDN1Q6P1N9 297 aa18.31■□□□□ 0.52
TRIM11-201ENST00000284551 FBXO11Q86XK2 927 aa18.31■□□□□ 0.52
TRIM11-201ENST00000284551 BMP2KQ9NSY1 1161 aaPredicted RBP18.31■□□□□ 0.52
TRIM11-201ENST00000284551 MYO3BQ8WXR4 1341 aa18.31■□□□□ 0.52
TRIM11-201ENST00000284551 USO1O60763 962 aaKnown RBP18.31■□□□□ 0.52
TRIM11-201ENST00000284551 TACC1O75410 805 aa18.31■□□□□ 0.52
TRIM11-201ENST00000284551 LCA5LO95447 670 aa18.31■□□□□ 0.52
TRIM11-201ENST00000284551 SYF2O95926 243 aaKnown RBP18.31■□□□□ 0.52
TRIM11-201ENST00000284551 KCNH2Q12809 1159 aa18.31■□□□□ 0.52
TRIM11-201ENST00000284551 FOXR1Q6PIV2 292 aa18.31■□□□□ 0.52
TRIM11-201ENST00000284551 PODNQ7Z5L7 613 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms