RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 TRMT13Q9NUP7 481 aaKnown RBP7.4□□□□□ -1.22
CD44-204ENST00000279452 NOL7Q9UMY1 257 aaKnown RBP7.4□□□□□ -1.22
CD44-204ENST00000279452 TRPC6Q9Y210 931 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 TELO2Q9Y4R8 837 aa7.4□□□□□ -1.22
CD44-204ENST00000279452 NFASCO94856 1347 aa7.39□□□□□ -1.23
CD44-204ENST00000279452 VPS37CA5D8V6 355 aaPredicted RBP7.39□□□□□ -1.23
CD44-204ENST00000279452 M0R2N6 131 aa7.39□□□□□ -1.23
CD44-204ENST00000279452 MSH4O15457 936 aa7.39□□□□□ -1.23
CD44-204ENST00000279452 SLC37A4O43826 429 aa7.39□□□□□ -1.23
CD44-204ENST00000279452 BAG4O95429 457 aaKnown RBP7.39□□□□□ -1.23
CD44-204ENST00000279452 SUPT20HL2P0C7V6 817 aa7.39□□□□□ -1.23
CD44-204ENST00000279452 GCFC2P16383 781 aaKnown RBP7.39□□□□□ -1.23
CD44-204ENST00000279452 CIITAP33076 1130 aa7.39□□□□□ -1.23
CD44-204ENST00000279452 MCM7P33993 719 aa7.39□□□□□ -1.23
CD44-204ENST00000279452 IGBP1P78318 339 aa7.39□□□□□ -1.23
CD44-204ENST00000279452 KRT76Q01546 638 aa7.39□□□□□ -1.23
CD44-204ENST00000279452 FAAP100Q0VG06 881 aa7.39□□□□□ -1.23
CD44-204ENST00000279452 PTGISQ16647 500 aa7.39□□□□□ -1.23
CD44-204ENST00000279452 EARS2Q5JPH6 523 aaKnown RBP7.39□□□□□ -1.23
CD44-204ENST00000279452 C1orf53Q5VUE5 145 aa7.39□□□□□ -1.23
CD44-204ENST00000279452 FAM160B1Q5W0V3 765 aa7.39□□□□□ -1.23
CD44-204ENST00000279452 LARP1BQ659C4 914 aaKnown RBP7.39□□□□□ -1.23
CD44-204ENST00000279452 NFRKBQ6P4R8 1299 aa7.39□□□□□ -1.23
CD44-204ENST00000279452 POTEHQ6S545 545 aa7.39□□□□□ -1.23
CD44-204ENST00000279452 ANKRD33Q7Z3H0 272 aa7.39□□□□□ -1.23
CD44-204ENST00000279452 SH3RF1Q7Z6J0 888 aa7.39□□□□□ -1.23
CD44-204ENST00000279452 FAM126BQ8IXS8 530 aa7.39□□□□□ -1.23
CD44-204ENST00000279452 SPRYD3Q8NCJ5 442 aa7.39□□□□□ -1.23
CD44-204ENST00000279452 FBXO18Q8NFZ0 1043 aa7.39□□□□□ -1.23
CD44-204ENST00000279452 CRYGNQ8WXF5 182 aa7.39□□□□□ -1.23
CD44-204ENST00000279452 HIPK3Q9H422 1215 aa7.39□□□□□ -1.23
CD44-204ENST00000279452 HDAC6Q9UBN7 1215 aa7.39□□□□□ -1.23
CD44-204ENST00000279452 GRIN2DO15399 1336 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 GSTTP1A0A1W2PQM5 241 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 C17orf102A2RUQ5 167 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 TRIM43BA6NCK2 446 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 WDR64B1ANS9 1081 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 KIF28PB7ZC32 967 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 NEMFO60524 1076 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 CCNE2O96020 404 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 PSAPP07602 524 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 SMIM10L2AP0DMW4 78 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 SMIM10L2BP0DMW5 78 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 CYP2C9P11712 490 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 MAGEA10P43363 369 aaPredicted RBP7.38□□□□□ -1.23
CD44-204ENST00000279452 STAT5BP51692 787 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 PTPN11Q06124 597 aaPredicted RBP7.38□□□□□ -1.23
CD44-204ENST00000279452 PPFIA1Q13136 1202 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 CALCRLQ16602 461 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 Q4G0T1 1027 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 NCAPH2Q6IBW4 605 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 GDF6Q6KF10 455 aaPredicted RBP7.38□□□□□ -1.23
CD44-204ENST00000279452 SWSAP1Q6NVH7 229 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 PDXDC2PQ6P474 469 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 MOXD1Q6UVY6 613 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 MIER3Q7Z3K6 550 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 NOSTRINQ8IVI9 506 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 CCDC155Q8N6L0 562 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 RETREG2Q8NC44 543 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 KAT2BQ92831 832 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 BADQ92934 168 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 TNFRSF25Q93038 417 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 TRIM43Q96BQ3 446 aaPredicted RBP7.38□□□□□ -1.23
CD44-204ENST00000279452 TOX2Q96NM4 488 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 C16orf70Q9BSU1 422 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 SEZ6LQ9BYH1 1024 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 UBE2OQ9C0C9 1292 aaKnown RBP7.38□□□□□ -1.23
CD44-204ENST00000279452 FOXP1Q9H334 677 aaPredicted RBP7.38□□□□□ -1.23
CD44-204ENST00000279452 SMARCAD1Q9H4L7 1026 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 ZNF302Q9NR11 478 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 ERAP1Q9NZ08 941 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 GTF2IRD1Q9UHL9 959 aa7.38□□□□□ -1.23
CD44-204ENST00000279452 KIAA1217Q5T5P2 1943 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 EMSYQ7Z589 1322 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 CYP3A7-CYP3A51PA0A087WV96 503 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 GNAT1P11488 350 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 HOXD8P13378 290 aaPredicted RBP7.37□□□□□ -1.23
CD44-204ENST00000279452 PDCP20941 246 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 CYP3A7P24462 503 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 SFNP31947 248 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 CYP2C18P33260 490 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 TXKP42681 527 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 CDK7P50613 346 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 JAK3P52333 1124 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 CCL23P55773 120 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 ZNF200P98182 395 aaPredicted RBP7.37□□□□□ -1.23
CD44-204ENST00000279452 FPGSQ05932 587 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 ZNF174Q15697 407 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 TTC38Q5R3I4 469 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 PPP4R3AQ6IN85 833 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 ZNF746Q6NUN9 644 aaPredicted RBP7.37□□□□□ -1.23
CD44-204ENST00000279452 FERMT3Q86UX7 667 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 CCDC60Q8IWA6 550 aaPredicted RBP7.37□□□□□ -1.23
CD44-204ENST00000279452 SMAP1Q8IYB5 467 aaPredicted RBP7.37□□□□□ -1.23
CD44-204ENST00000279452 SLFN12Q8IYM2 578 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 TMEM199Q8N511 208 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 SLC43A3Q8NBI5 491 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 SLC5A5Q92911 643 aa7.37□□□□□ -1.23
CD44-204ENST00000279452 TNPO1Q92973 898 aaKnown RBP7.37□□□□□ -1.23
CD44-204ENST00000279452 ATP6V0A1Q93050 837 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms