RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 IKZF4Q9H2S9 585 aa19.89■□□□□ 0.78
CAPN1-201ENST00000279247 SAMM50Q9Y512 469 aa19.89■□□□□ 0.78
CAPN1-201ENST00000279247 ZHX2Q9Y6X8 837 aa19.89■□□□□ 0.78
CAPN1-201ENST00000279247 TBX3O15119 743 aa19.89■□□□□ 0.77
CAPN1-201ENST00000279247 RPS12P25398 132 aaKnown RBP19.89■□□□□ 0.77
CAPN1-201ENST00000279247 MCTP2Q6DN12 878 aa19.89■□□□□ 0.77
CAPN1-201ENST00000279247 WDR11Q9BZH6 1224 aa19.89■□□□□ 0.77
CAPN1-201ENST00000279247 ICAM1P05362 532 aa19.89■□□□□ 0.77
CAPN1-201ENST00000279247 NCBP1Q09161 790 aaKnown RBP19.89■□□□□ 0.77
CAPN1-201ENST00000279247 ARHGAP29Q52LW3 1261 aa19.89■□□□□ 0.77
CAPN1-201ENST00000279247 OTOP1Q7RTM1 612 aa19.89■□□□□ 0.77
CAPN1-201ENST00000279247 SCFD1Q8WVM8 642 aa19.89■□□□□ 0.77
CAPN1-201ENST00000279247 ATG4CQ96DT6 458 aa19.89■□□□□ 0.77
CAPN1-201ENST00000279247 NDST4Q9H3R1 872 aa19.89■□□□□ 0.77
CAPN1-201ENST00000279247 SYNPO2Q9UMS6 1093 aa19.89■□□□□ 0.77
CAPN1-201ENST00000279247 LTBP3Q9NS15 1303 aa19.89■□□□□ 0.77
CAPN1-201ENST00000279247 EPHB6O15197 1021 aa19.88■□□□□ 0.77
CAPN1-201ENST00000279247 CTNND1O60716 968 aaKnown RBP19.88■□□□□ 0.77
CAPN1-201ENST00000279247 EHHADHQ08426 723 aa19.88■□□□□ 0.77
CAPN1-201ENST00000279247 TRAF1Q13077 416 aa19.88■□□□□ 0.77
CAPN1-201ENST00000279247 GIT2Q14161 759 aa19.88■□□□□ 0.77
CAPN1-201ENST00000279247 C9orf131Q5VYM1 1079 aa19.88■□□□□ 0.77
CAPN1-201ENST00000279247 OR8K1Q8NGG5 319 aa19.88■□□□□ 0.77
CAPN1-201ENST00000279247 WDR46O15213 610 aaKnown RBP19.88■□□□□ 0.77
CAPN1-201ENST00000279247 SORBS3O60504 671 aa19.88■□□□□ 0.77
CAPN1-201ENST00000279247 MYBP10242 640 aa19.88■□□□□ 0.77
CAPN1-201ENST00000279247 CASQ1P31415 396 aa19.88■□□□□ 0.77
CAPN1-201ENST00000279247 PLS1Q14651 629 aa19.88■□□□□ 0.77
CAPN1-201ENST00000279247 CYP26C1Q6V0L0 522 aa19.88■□□□□ 0.77
CAPN1-201ENST00000279247 KSR1Q8IVT5 923 aa19.88■□□□□ 0.77
CAPN1-201ENST00000279247 PICK1Q9NRD5 415 aa19.88■□□□□ 0.77
CAPN1-201ENST00000279247 TRIM10Q9UDY6 481 aa19.88■□□□□ 0.77
CAPN1-201ENST00000279247 IPO5O00410 1097 aaKnown RBP19.87■□□□□ 0.77
CAPN1-201ENST00000279247 CYP3A4P08684 503 aa19.87■□□□□ 0.77
CAPN1-201ENST00000279247 ITGB5P18084 799 aa19.87■□□□□ 0.77
CAPN1-201ENST00000279247 PPP1R2P41236 205 aa19.87■□□□□ 0.77
CAPN1-201ENST00000279247 VWA3BQ502W6 1294 aa19.87■□□□□ 0.77
CAPN1-201ENST00000279247 TBCAO75347 108 aaKnown RBP19.87■□□□□ 0.77
CAPN1-201ENST00000279247 APBA1Q02410 837 aa19.87■□□□□ 0.77
CAPN1-201ENST00000279247 KCNA1Q09470 495 aa19.87■□□□□ 0.77
CAPN1-201ENST00000279247 PSMD2Q13200 908 aa19.87■□□□□ 0.77
CAPN1-201ENST00000279247 LRRC55Q6ZSA7 311 aa19.87■□□□□ 0.77
CAPN1-201ENST00000279247 TMTC1Q8IUR5 882 aa19.87■□□□□ 0.77
CAPN1-201ENST00000279247 UNC45AQ9H3U1 944 aa19.87■□□□□ 0.77
CAPN1-201ENST00000279247 ZSWIM4Q9H7M6 989 aa19.87■□□□□ 0.77
CAPN1-201ENST00000279247 GPRC5DQ9NZD1 345 aa19.87■□□□□ 0.77
CAPN1-201ENST00000279247 WRAP73Q9P2S5 460 aaPredicted RBP19.87■□□□□ 0.77
CAPN1-201ENST00000279247 RASSF10A6NK89 507 aa19.86■□□□□ 0.77
CAPN1-201ENST00000279247 SLITRK3O94933 977 aa19.86■□□□□ 0.77
CAPN1-201ENST00000279247 GCNT3O95395 438 aa19.86■□□□□ 0.77
CAPN1-201ENST00000279247 ELF2Q15723 593 aa19.86■□□□□ 0.77
CAPN1-201ENST00000279247 ENOX2Q16206 610 aaKnown RBP19.86■□□□□ 0.77
CAPN1-201ENST00000279247 GPR162Q16538 588 aa19.86■□□□□ 0.77
CAPN1-201ENST00000279247 TAAR1Q96RJ0 339 aa19.86■□□□□ 0.77
CAPN1-201ENST00000279247 NAA15Q9BXJ9 866 aaKnown RBP19.86■□□□□ 0.77
CAPN1-201ENST00000279247 EHMT1Q9H9B1 1298 aa19.86■□□□□ 0.77
CAPN1-201ENST00000279247 CTIFO43310 598 aaKnown RBP19.86■□□□□ 0.77
CAPN1-201ENST00000279247 SLU7O95391 586 aaKnown RBP19.86■□□□□ 0.77
CAPN1-201ENST00000279247 MAP3K10Q02779 954 aa19.86■□□□□ 0.77
CAPN1-201ENST00000279247 LRRC63Q05C16 580 aa19.86■□□□□ 0.77
CAPN1-201ENST00000279247 TRIM14Q14142 442 aa19.86■□□□□ 0.77
CAPN1-201ENST00000279247 ZNF569Q5MCW4 686 aa19.86■□□□□ 0.77
CAPN1-201ENST00000279247 SYT2Q8N9I0 419 aaPredicted RBP19.86■□□□□ 0.77
CAPN1-201ENST00000279247 KIAA1683Q9H0B3 1180 aa19.86■□□□□ 0.77
CAPN1-201ENST00000279247 PEX10O60683 326 aa19.86■□□□□ 0.77
CAPN1-201ENST00000279247 PSMD10O75832 226 aa19.86■□□□□ 0.77
CAPN1-201ENST00000279247 RPS6P62753 249 aaKnown RBP19.86■□□□□ 0.77
CAPN1-201ENST00000279247 FKBP3Q00688 224 aaKnown RBP19.86■□□□□ 0.77
CAPN1-201ENST00000279247 RIPK3Q9Y572 518 aa19.86■□□□□ 0.77
CAPN1-201ENST00000279247 CLIC2O15247 247 aa19.85■□□□□ 0.77
CAPN1-201ENST00000279247 SEMA3FQ13275 785 aa19.85■□□□□ 0.77
CAPN1-201ENST00000279247 CLEC4DQ8WXI8 215 aa19.85■□□□□ 0.77
CAPN1-201ENST00000279247 CCDC51Q96ER9 411 aa19.85■□□□□ 0.77
CAPN1-201ENST00000279247 NLRC4Q9NPP4 1024 aa19.85■□□□□ 0.77
CAPN1-201ENST00000279247 GUCA1BQ9UMX6 200 aa19.85■□□□□ 0.77
CAPN1-201ENST00000279247 A0A1W2PQC6 194 aa19.85■□□□□ 0.77
CAPN1-201ENST00000279247 SP4Q02446 784 aa19.85■□□□□ 0.77
CAPN1-201ENST00000279247 ADAM9Q13443 819 aa19.85■□□□□ 0.77
CAPN1-201ENST00000279247 MAN2A1Q16706 1144 aa19.85■□□□□ 0.77
CAPN1-201ENST00000279247 ERCC6LQ2NKX8 1250 aa19.85■□□□□ 0.77
CAPN1-201ENST00000279247 MYCT1Q8N699 235 aa19.85■□□□□ 0.77
CAPN1-201ENST00000279247 LPAR1Q92633 364 aa19.85■□□□□ 0.77
CAPN1-201ENST00000279247 KCNH7Q9NS40 1196 aa19.85■□□□□ 0.77
CAPN1-201ENST00000279247 PCDHA2Q9Y5H9 948 aa19.85■□□□□ 0.77
CAPN1-201ENST00000279247 TESPA1A2RU30 521 aaPredicted RBP19.84■□□□□ 0.77
CAPN1-201ENST00000279247 PLEKP08567 350 aaPredicted RBP19.84■□□□□ 0.77
CAPN1-201ENST00000279247 CYP27A1Q02318 531 aa19.84■□□□□ 0.77
CAPN1-201ENST00000279247 WDR59Q6PJI9 974 aa19.84■□□□□ 0.77
CAPN1-201ENST00000279247 TRERF1Q96PN7 1200 aa19.84■□□□□ 0.77
CAPN1-201ENST00000279247 CARD6Q9BX69 1037 aa19.84■□□□□ 0.77
CAPN1-201ENST00000279247 CAPN11Q9UMQ6 739 aa19.84■□□□□ 0.77
CAPN1-201ENST00000279247 COL4A3BPQ9Y5P4 624 aa19.84■□□□□ 0.77
CAPN1-201ENST00000279247 FGFR1OPO95684 399 aaKnown RBP19.84■□□□□ 0.77
CAPN1-201ENST00000279247 TFRCP02786 760 aaKnown RBP19.84■□□□□ 0.77
CAPN1-201ENST00000279247 NR2F2P24468 414 aa19.84■□□□□ 0.77
CAPN1-201ENST00000279247 NMT1P30419 496 aaKnown RBP19.84■□□□□ 0.77
CAPN1-201ENST00000279247 ZC2HC1CQ53FD0 456 aaPredicted RBP19.84■□□□□ 0.77
CAPN1-201ENST00000279247 DCAF15Q66K64 600 aa19.84■□□□□ 0.77
CAPN1-201ENST00000279247 SLC38A10Q9HBR0 1119 aa19.84■□□□□ 0.77
CAPN1-201ENST00000279247 EPN1Q9Y6I3 576 aaPredicted RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms