RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 IREB2P48200 963 aaKnown RBP14.31□□□□□ -0.12
C9orf3-201ENST00000277198 MAN2A1Q16706 1144 aa14.31□□□□□ -0.12
C9orf3-201ENST00000277198 CCDC70Q6NSX1 233 aa14.31□□□□□ -0.12
C9orf3-201ENST00000277198 ZNF572Q7Z3I7 529 aaPredicted RBP14.31□□□□□ -0.12
C9orf3-201ENST00000277198 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.31□□□□□ -0.12
C9orf3-201ENST00000277198 SECISBP2LQ93073 1101 aaKnown RBP14.31□□□□□ -0.12
C9orf3-201ENST00000277198 ZKSCAN4Q969J2 545 aaPredicted RBP14.31□□□□□ -0.12
C9orf3-201ENST00000277198 SLC10A4Q96EP9 437 aa14.31□□□□□ -0.12
C9orf3-201ENST00000277198 PCMTD1Q96MG8 357 aaPredicted RBP14.31□□□□□ -0.12
C9orf3-201ENST00000277198 BEGAINQ9BUH8 593 aa14.31□□□□□ -0.12
C9orf3-201ENST00000277198 SEMA6BQ9H3T3 888 aa14.31□□□□□ -0.12
C9orf3-201ENST00000277198 RNF186Q9NXI6 227 aa14.31□□□□□ -0.12
C9orf3-201ENST00000277198 LRWD1Q9UFC0 647 aa14.31□□□□□ -0.12
C9orf3-201ENST00000277198 NAV1Q8NEY1 1877 aa14.3□□□□□ -0.12
C9orf3-201ENST00000277198 DDTLA6NHG4 134 aaPredicted RBP14.3□□□□□ -0.12
C9orf3-201ENST00000277198 SLC26A4O43511 780 aa14.3□□□□□ -0.12
C9orf3-201ENST00000277198 RPS6KA5O75582 802 aa14.3□□□□□ -0.12
C9orf3-201ENST00000277198 TRPA1O75762 1119 aa14.3□□□□□ -0.12
C9orf3-201ENST00000277198 FCER1AP12319 257 aa14.3□□□□□ -0.12
C9orf3-201ENST00000277198 CALCRLQ16602 461 aa14.3□□□□□ -0.12
C9orf3-201ENST00000277198 USP17L2Q6R6M4 530 aa14.3□□□□□ -0.12
C9orf3-201ENST00000277198 LARP4BQ92615 738 aaKnown RBP14.3□□□□□ -0.12
C9orf3-201ENST00000277198 CEP95Q96GE4 821 aa14.3□□□□□ -0.12
C9orf3-201ENST00000277198 WNK4Q96J92 1243 aa14.3□□□□□ -0.12
C9orf3-201ENST00000277198 WRNIP1Q96S55 665 aa14.3□□□□□ -0.12
C9orf3-201ENST00000277198 MMS19Q96T76 1030 aa14.3□□□□□ -0.12
C9orf3-201ENST00000277198 NDST4Q9H3R1 872 aa14.3□□□□□ -0.12
C9orf3-201ENST00000277198 BLOC1S4Q9NUP1 217 aa14.3□□□□□ -0.12
C9orf3-201ENST00000277198 SAP30BPQ9UHR5 308 aaKnown RBP14.3□□□□□ -0.12
C9orf3-201ENST00000277198 SIK3Q9Y2K2 1263 aa14.3□□□□□ -0.12
C9orf3-201ENST00000277198 MYH8P13535 1937 aa14.3□□□□□ -0.12
C9orf3-201ENST00000277198 ATRNL1Q5VV63 1379 aa14.3□□□□□ -0.12
C9orf3-201ENST00000277198 ENC1O14682 589 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 INPP5BP32019 993 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 GRB10Q13322 594 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 ZSCAN26Q16670 478 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 PPP4R3AQ6IN85 833 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 NEK11Q8NG66 645 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 CDK5RAP3Q96JB5 506 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 PIGSQ96S52 555 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 IDI2Q9BXS1 227 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 LACRTQ9GZZ8 138 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 TSPYL1Q9H0U9 437 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 NUCKS1Q9H1E3 243 aaKnown RBP14.29□□□□□ -0.12
C9orf3-201ENST00000277198 VPS18Q9P253 973 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 FAM196BA6NMK8 535 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 TULP2O00295 520 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 TACC1O75410 805 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 TFRCP02786 760 aaKnown RBP14.29□□□□□ -0.12
C9orf3-201ENST00000277198 SNHG28P0DPA3 235 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 PDHBP11177 359 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 ACTN2P35609 894 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 ADCY7P51828 1080 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 EHHADHQ08426 723 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 POTEDQ86YR6 584 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 ANKRD13AQ8IZ07 590 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 OPTNQ96CV9 577 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 NAP1L4Q99733 375 aaKnown RBP14.29□□□□□ -0.12
C9orf3-201ENST00000277198 R3HDMLQ9H3Y0 253 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 SNCAIPQ9Y6H5 919 aa14.29□□□□□ -0.12
C9orf3-201ENST00000277198 MYMKA6NI61 221 aa14.28□□□□□ -0.12
C9orf3-201ENST00000277198 IVLP07476 585 aa14.28□□□□□ -0.12
C9orf3-201ENST00000277198 IDEP14735 1019 aa14.28□□□□□ -0.12
C9orf3-201ENST00000277198 TXKP42681 527 aa14.28□□□□□ -0.12
C9orf3-201ENST00000277198 KRT79Q5XKE5 535 aa14.28□□□□□ -0.12
C9orf3-201ENST00000277198 MMGT1Q8N4V1 131 aa14.28□□□□□ -0.12
C9orf3-201ENST00000277198 CCDC155Q8N6L0 562 aa14.28□□□□□ -0.12
C9orf3-201ENST00000277198 RAD54LQ92698 747 aa14.28□□□□□ -0.12
C9orf3-201ENST00000277198 PNMA5Q96PV4 448 aa14.28□□□□□ -0.12
C9orf3-201ENST00000277198 TSG101Q99816 390 aa14.28□□□□□ -0.12
C9orf3-201ENST00000277198 MTMR4Q9NYA4 1195 aa14.28□□□□□ -0.12
C9orf3-201ENST00000277198 HDAC6Q9UBN7 1215 aa14.28□□□□□ -0.12
C9orf3-201ENST00000277198 BIN2Q9UBW5 565 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-201ENST00000277198 SSU72P8A0A1W2PR75 194 aa14.27□□□□□ -0.12
C9orf3-201ENST00000277198 RCCD1A6NED2 376 aa14.27□□□□□ -0.12
C9orf3-201ENST00000277198 PJA2O43164 708 aa14.27□□□□□ -0.12
C9orf3-201ENST00000277198 TCP1P17987 556 aaKnown RBP14.27□□□□□ -0.12
C9orf3-201ENST00000277198 LMAN1P49257 510 aa14.27□□□□□ -0.12
C9orf3-201ENST00000277198 TMEM119Q4V9L6 283 aa14.27□□□□□ -0.12
C9orf3-201ENST00000277198 LEKR1Q6ZMV7 388 aa14.27□□□□□ -0.12
C9orf3-201ENST00000277198 COG1Q8WTW3 980 aa14.27□□□□□ -0.12
C9orf3-201ENST00000277198 SYN2Q92777 582 aaPredicted RBP14.27□□□□□ -0.12
C9orf3-201ENST00000277198 IFIH1Q9BYX4 1025 aaKnown RBP14.27□□□□□ -0.12
C9orf3-201ENST00000277198 SH2D4AQ9H788 454 aa14.27□□□□□ -0.12
C9orf3-201ENST00000277198 SUGCTQ9HAC7 445 aa14.27□□□□□ -0.12
C9orf3-201ENST00000277198 SLC39A2Q9NP94 309 aa14.27□□□□□ -0.12
C9orf3-201ENST00000277198 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.27□□□□□ -0.12
C9orf3-201ENST00000277198 SNX12Q9UMY4 172 aa14.27□□□□□ -0.12
C9orf3-201ENST00000277198 MTMR7Q9Y216 660 aa14.27□□□□□ -0.12
C9orf3-201ENST00000277198 PCDHA13Q9Y5I0 950 aa14.27□□□□□ -0.12
C9orf3-201ENST00000277198 DDX60LQ5H9U9 1706 aaKnown RBP14.27□□□□□ -0.12
C9orf3-201ENST00000277198 LRRIQ3A6PVS8 624 aaPredicted RBP14.27□□□□□ -0.13
C9orf3-201ENST00000277198 GCFC2P16383 781 aaKnown RBP14.27□□□□□ -0.13
C9orf3-201ENST00000277198 KLK7P49862 253 aa14.27□□□□□ -0.13
C9orf3-201ENST00000277198 MAPK8IP2Q13387 824 aaPredicted RBP14.27□□□□□ -0.13
C9orf3-201ENST00000277198 CAGE1Q8TC20 777 aa14.27□□□□□ -0.13
C9orf3-201ENST00000277198 OTUD5Q96G74 571 aa14.27□□□□□ -0.13
C9orf3-201ENST00000277198 ALS2CR12Q96Q35 445 aa14.27□□□□□ -0.13
C9orf3-201ENST00000277198 JADE2Q9NQC1 790 aa14.27□□□□□ -0.13
C9orf3-201ENST00000277198 PNMA6FA0A0J9YX94 578 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms