RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 PPP1R3GB7ZBB8 358 aa13.97□□□□□ -0.17
CAPN9-201ENST00000271971 DHX15O43143 795 aaKnown RBP13.97□□□□□ -0.17
CAPN9-201ENST00000271971 RGS20O76081 388 aa13.97□□□□□ -0.17
CAPN9-201ENST00000271971 MYL1P05976 194 aa13.97□□□□□ -0.17
CAPN9-201ENST00000271971 PLA2G4BP0C869 781 aa13.97□□□□□ -0.17
CAPN9-201ENST00000271971 RAD51AP2Q09MP3 1159 aa13.97□□□□□ -0.17
CAPN9-201ENST00000271971 ZNF658Q5TYW1 1059 aaPredicted RBP13.97□□□□□ -0.17
CAPN9-201ENST00000271971 WDR78Q5VTH9 848 aa13.97□□□□□ -0.17
CAPN9-201ENST00000271971 RMND1Q9NWS8 449 aa13.97□□□□□ -0.17
CAPN9-201ENST00000271971 FBXO40Q9UH90 709 aa13.97□□□□□ -0.17
CAPN9-201ENST00000271971 DACH1Q9UI36 760 aa13.97□□□□□ -0.17
CAPN9-201ENST00000271971 CTNND2Q9UQB3 1225 aa13.97□□□□□ -0.17
CAPN9-201ENST00000271971 PLXNB2O15031 1838 aa13.97□□□□□ -0.17
CAPN9-201ENST00000271971 NPHP3-ACAD11A0A0J9YXS1 232 aa13.96□□□□□ -0.17
CAPN9-201ENST00000271971 IKBKBO14920 756 aa13.96□□□□□ -0.17
CAPN9-201ENST00000271971 PFASO15067 1338 aa13.96□□□□□ -0.17
CAPN9-201ENST00000271971 PGK2P07205 417 aa13.96□□□□□ -0.17
CAPN9-201ENST00000271971 ATP1A3P13637 1013 aa13.96□□□□□ -0.17
CAPN9-201ENST00000271971 AMPD3Q01432 767 aa13.96□□□□□ -0.17
CAPN9-201ENST00000271971 CACNB1Q02641 598 aaPredicted RBP13.96□□□□□ -0.17
CAPN9-201ENST00000271971 SEMA3FQ13275 785 aa13.96□□□□□ -0.17
CAPN9-201ENST00000271971 B3GNT9Q6UX72 402 aa13.96□□□□□ -0.17
CAPN9-201ENST00000271971 DDX12PQ92771 950 aa13.96□□□□□ -0.17
CAPN9-201ENST00000271971 RIT2Q99578 217 aa13.96□□□□□ -0.17
CAPN9-201ENST00000271971 TRIM5Q9C035 493 aa13.96□□□□□ -0.17
CAPN9-201ENST00000271971 WRAP73Q9P2S5 460 aaPredicted RBP13.96□□□□□ -0.17
CAPN9-201ENST00000271971 SYNRGQ9UMZ2 1314 aa13.96□□□□□ -0.17
CAPN9-201ENST00000271971 RIOK3O14730 519 aaKnown RBP13.96□□□□□ -0.18
CAPN9-201ENST00000271971 FCER1AP12319 257 aa13.96□□□□□ -0.18
CAPN9-201ENST00000271971 ERVK-9P63128 1117 aa13.96□□□□□ -0.18
CAPN9-201ENST00000271971 ERVK-24P63145 666 aa13.96□□□□□ -0.18
CAPN9-201ENST00000271971 PDE4DQ08499 809 aa13.96□□□□□ -0.18
CAPN9-201ENST00000271971 TPH2Q8IWU9 490 aa13.96□□□□□ -0.18
CAPN9-201ENST00000271971 BANK1Q8NDB2 785 aa13.96□□□□□ -0.18
CAPN9-201ENST00000271971 BBXQ8WY36 941 aaPredicted RBP13.96□□□□□ -0.18
CAPN9-201ENST00000271971 HSD17B14Q9BPX1 270 aa13.96□□□□□ -0.18
CAPN9-201ENST00000271971 PORCNQ9H237 461 aa13.96□□□□□ -0.18
CAPN9-201ENST00000271971 KCNF1Q9H3M0 494 aa13.96□□□□□ -0.18
CAPN9-201ENST00000271971 EXOC1Q9NV70 894 aa13.96□□□□□ -0.18
CAPN9-201ENST00000271971 FANCLQ9NW38 375 aa13.96□□□□□ -0.18
CAPN9-201ENST00000271971 PNMA3Q9UL41 463 aa13.96□□□□□ -0.18
CAPN9-201ENST00000271971 SMTNL1A8MU46 457 aa13.95□□□□□ -0.18
CAPN9-201ENST00000271971 ZBTB39O15060 712 aa13.95□□□□□ -0.18
CAPN9-201ENST00000271971 SORBS3O60504 671 aa13.95□□□□□ -0.18
CAPN9-201ENST00000271971 RHOBTB3O94955 611 aa13.95□□□□□ -0.18
CAPN9-201ENST00000271971 IDEP14735 1019 aa13.95□□□□□ -0.18
CAPN9-201ENST00000271971 PRCPP42785 496 aa13.95□□□□□ -0.18
CAPN9-201ENST00000271971 ALDH5A1P51649 535 aaPredicted RBP13.95□□□□□ -0.18
CAPN9-201ENST00000271971 KCNB1Q14721 858 aa13.95□□□□□ -0.18
CAPN9-201ENST00000271971 GPBP1Q86WP2 473 aa13.95□□□□□ -0.18
CAPN9-201ENST00000271971 ANKRD13CQ8N6S4 541 aa13.95□□□□□ -0.18
CAPN9-201ENST00000271971 PIGOQ8TEQ8 1089 aa13.95□□□□□ -0.18
CAPN9-201ENST00000271971 INPP4AQ96PE3 977 aaPredicted RBP13.95□□□□□ -0.18
CAPN9-201ENST00000271971 PTPN18Q99952 460 aa13.95□□□□□ -0.18
CAPN9-201ENST00000271971 POLR3CQ9BUI4 534 aaPredicted RBP13.95□□□□□ -0.18
CAPN9-201ENST00000271971 BCAS3Q9H6U6 928 aa13.95□□□□□ -0.18
CAPN9-201ENST00000271971 OGFRQ9NZT2 677 aa13.95□□□□□ -0.18
CAPN9-201ENST00000271971 NFE2L3Q9Y4A8 694 aa13.95□□□□□ -0.18
CAPN9-201ENST00000271971 PLXNA1Q9UIW2 1896 aa13.95□□□□□ -0.18
CAPN9-201ENST00000271971 SOWAHBA6NEL2 793 aa13.95□□□□□ -0.18
CAPN9-201ENST00000271971 POTEB2H3BUK9 544 aa13.95□□□□□ -0.18
CAPN9-201ENST00000271971 SLITRK3O94933 977 aa13.95□□□□□ -0.18
CAPN9-201ENST00000271971 ZBTB48P10074 688 aaPredicted RBP13.95□□□□□ -0.18
CAPN9-201ENST00000271971 ZNF75DP51815 510 aa13.95□□□□□ -0.18
CAPN9-201ENST00000271971 SLC12A3P55017 1021 aa13.95□□□□□ -0.18
CAPN9-201ENST00000271971 EFCC1Q9HA90 598 aa13.95□□□□□ -0.18
CAPN9-201ENST00000271971 LOXHD1Q8IVV2 1947 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 SLC25A27O95847 323 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 STK4Q13043 487 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 XRRA1Q6P2D8 792 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 MIER3Q7Z3K6 550 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 SPC24Q8NBT2 197 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 DNAJC19Q96DA6 116 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 LXNQ9BS40 222 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 BHMT2Q9H2M3 363 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 PYCARDQ9ULZ3 195 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 DNM3Q9UQ16 869 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 TELO2Q9Y4R8 837 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 SAMM50Q9Y512 469 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 SLC26A4O43511 780 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 CCNE2O96020 404 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 CYP11B2P19099 503 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 GABPB1Q06547 395 aaPredicted RBP13.94□□□□□ -0.18
CAPN9-201ENST00000271971 ARSHQ5FYA8 562 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 SARM1Q6SZW1 724 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 UNC13DQ70J99 1090 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 RASAL3Q86YV0 1011 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 FAM133AQ8N9E0 248 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 KIAA0895Q8NCT3 520 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 GIMAP8Q8ND71 665 aaPredicted RBP13.94□□□□□ -0.18
CAPN9-201ENST00000271971 DNERQ8NFT8 737 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 GPRASP2Q96D09 838 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 SAMSN1Q9NSI8 373 aaKnown RBP13.94□□□□□ -0.18
CAPN9-201ENST00000271971 TMEM51Q9NW97 253 aa13.94□□□□□ -0.18
CAPN9-201ENST00000271971 MYH11P35749 1972 aa13.93□□□□□ -0.18
CAPN9-201ENST00000271971 TRIM49BA6NDI0 452 aa13.93□□□□□ -0.18
CAPN9-201ENST00000271971 ERCC5P28715 1186 aaPredicted RBP13.93□□□□□ -0.18
CAPN9-201ENST00000271971 ZNF157P51786 506 aaPredicted RBP13.93□□□□□ -0.18
CAPN9-201ENST00000271971 TPM4P67936 248 aa13.93□□□□□ -0.18
CAPN9-201ENST00000271971 SP4Q02446 784 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms