RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 RAD51AP2Q09MP3 1159 aa18.46■□□□□ 0.55
CCDC40-201ENST00000269318 CTTNQ14247 550 aaKnown RBP18.46■□□□□ 0.55
CCDC40-201ENST00000269318 PCNX4Q63HM2 1172 aa18.46■□□□□ 0.55
CCDC40-201ENST00000269318 TOGARAM2Q6ZUX3 1019 aa18.46■□□□□ 0.55
CCDC40-201ENST00000269318 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.46■□□□□ 0.55
CCDC40-201ENST00000269318 SCFD1Q8WVM8 642 aa18.46■□□□□ 0.55
CCDC40-201ENST00000269318 DYDC2Q96IM9 177 aa18.46■□□□□ 0.55
CCDC40-201ENST00000269318 RIT2Q99578 217 aa18.46■□□□□ 0.55
CCDC40-201ENST00000269318 BHMT2Q9H2M3 363 aa18.46■□□□□ 0.55
CCDC40-201ENST00000269318 TBC1D7Q9P0N9 293 aa18.46■□□□□ 0.55
CCDC40-201ENST00000269318 PPP2R2CQ9Y2T4 447 aa18.46■□□□□ 0.55
CCDC40-201ENST00000269318 UBIAD1Q9Y5Z9 338 aa18.46■□□□□ 0.55
CCDC40-201ENST00000269318 RIOK3O14730 519 aaKnown RBP18.46■□□□□ 0.55
CCDC40-201ENST00000269318 CHMP2AO43633 222 aa18.46■□□□□ 0.55
CCDC40-201ENST00000269318 FGFR1OPO95684 399 aaKnown RBP18.46■□□□□ 0.55
CCDC40-201ENST00000269318 KRT18P05783 430 aaKnown RBP18.46■□□□□ 0.55
CCDC40-201ENST00000269318 MUTP22033 750 aa18.46■□□□□ 0.55
CCDC40-201ENST00000269318 MTIF2P46199 727 aaKnown RBP18.46■□□□□ 0.55
CCDC40-201ENST00000269318 SUPT20HL1Q3ZLR7 823 aa18.46■□□□□ 0.55
CCDC40-201ENST00000269318 TRERF1Q96PN7 1200 aa18.46■□□□□ 0.55
CCDC40-201ENST00000269318 RUSC1Q9BVN2 902 aa18.46■□□□□ 0.55
CCDC40-201ENST00000269318 TEKT3Q9BXF9 490 aa18.46■□□□□ 0.55
CCDC40-201ENST00000269318 ABHD10Q9NUJ1 306 aa18.46■□□□□ 0.55
CCDC40-201ENST00000269318 SOWAHDA6NJG2 315 aa18.45■□□□□ 0.54
CCDC40-201ENST00000269318 ZSCAN12O43309 604 aa18.45■□□□□ 0.54
CCDC40-201ENST00000269318 DSG3P32926 999 aa18.45■□□□□ 0.54
CCDC40-201ENST00000269318 MRPS9P82933 396 aaKnown RBP18.45■□□□□ 0.54
CCDC40-201ENST00000269318 TAAR1Q96RJ0 339 aa18.45■□□□□ 0.54
CCDC40-201ENST00000269318 TSG101Q99816 390 aa18.45■□□□□ 0.54
CCDC40-201ENST00000269318 NOC4LQ9BVI4 516 aaKnown RBP18.45■□□□□ 0.54
CCDC40-201ENST00000269318 KCTD10Q9H3F6 313 aa18.45■□□□□ 0.54
CCDC40-201ENST00000269318 KCNH7Q9NS40 1196 aa18.45■□□□□ 0.54
CCDC40-201ENST00000269318 CTDP1Q9Y5B0 961 aaPredicted RBP18.45■□□□□ 0.54
CCDC40-201ENST00000269318 USP2O75604 605 aaPredicted RBP18.44■□□□□ 0.54
CCDC40-201ENST00000269318 MTF1Q14872 753 aa18.44■□□□□ 0.54
CCDC40-201ENST00000269318 EPHA7Q15375 998 aa18.44■□□□□ 0.54
CCDC40-201ENST00000269318 RAD9BQ6WBX8 426 aa18.44■□□□□ 0.54
CCDC40-201ENST00000269318 AFG3L2Q9Y4W6 797 aa18.44■□□□□ 0.54
CCDC40-201ENST00000269318 RIPK3Q9Y572 518 aa18.44■□□□□ 0.54
CCDC40-201ENST00000269318 TTC26A0AVF1 554 aa18.44■□□□□ 0.54
CCDC40-201ENST00000269318 RASSF10A6NK89 507 aa18.44■□□□□ 0.54
CCDC40-201ENST00000269318 PES1O00541 588 aaKnown RBP18.44■□□□□ 0.54
CCDC40-201ENST00000269318 DHX15O43143 795 aaKnown RBP18.44■□□□□ 0.54
CCDC40-201ENST00000269318 TUBB4AP04350 444 aa18.44■□□□□ 0.54
CCDC40-201ENST00000269318 OAZ1P54368 228 aa18.44■□□□□ 0.54
CCDC40-201ENST00000269318 TBC1D8BQ0IIM8 1120 aa18.44■□□□□ 0.54
CCDC40-201ENST00000269318 TKFCQ3LXA3 575 aa18.44■□□□□ 0.54
CCDC40-201ENST00000269318 RINT1Q6NUQ1 792 aa18.44■□□□□ 0.54
CCDC40-201ENST00000269318 TPH2Q8IWU9 490 aa18.44■□□□□ 0.54
CCDC40-201ENST00000269318 ZNF592Q92610 1267 aa18.44■□□□□ 0.54
CCDC40-201ENST00000269318 ERGIC2Q96RQ1 377 aa18.44■□□□□ 0.54
CCDC40-201ENST00000269318 TTYH3Q9C0H2 523 aa18.44■□□□□ 0.54
CCDC40-201ENST00000269318 JADE2Q9NQC1 790 aa18.44■□□□□ 0.54
CCDC40-201ENST00000269318 ADARB2Q9NS39 739 aaKnown RBP18.44■□□□□ 0.54
CCDC40-201ENST00000269318 WRAP73Q9P2S5 460 aaPredicted RBP18.44■□□□□ 0.54
CCDC40-201ENST00000269318 ZNF214Q9UL59 606 aaPredicted RBP18.44■□□□□ 0.54
CCDC40-201ENST00000269318 KIF20AO95235 890 aa18.43■□□□□ 0.54
CCDC40-201ENST00000269318 KRT9P35527 623 aa18.43■□□□□ 0.54
CCDC40-201ENST00000269318 CASP5P51878 434 aa18.43■□□□□ 0.54
CCDC40-201ENST00000269318 FKBP3Q00688 224 aaKnown RBP18.43■□□□□ 0.54
CCDC40-201ENST00000269318 PGM5Q15124 567 aa18.43■□□□□ 0.54
CCDC40-201ENST00000269318 TRIM65Q6PJ69 517 aa18.43■□□□□ 0.54
CCDC40-201ENST00000269318 RNF207Q6ZRF8 634 aa18.43■□□□□ 0.54
CCDC40-201ENST00000269318 CATSPERGQ6ZRH7 1159 aa18.43■□□□□ 0.54
CCDC40-201ENST00000269318 EPM2AIP1Q7L775 607 aaPredicted RBP18.43■□□□□ 0.54
CCDC40-201ENST00000269318 SFR1Q86XK3 245 aa18.43■□□□□ 0.54
CCDC40-201ENST00000269318 ZC3H3Q8IXZ2 948 aaKnown RBP18.43■□□□□ 0.54
CCDC40-201ENST00000269318 PIGOQ8TEQ8 1089 aa18.43■□□□□ 0.54
CCDC40-201ENST00000269318 AGO4Q9HCK5 861 aaKnown RBP18.43■□□□□ 0.54
CCDC40-201ENST00000269318 CAPN11Q9UMQ6 739 aa18.43■□□□□ 0.54
CCDC40-201ENST00000269318 PAPPA2Q9BXP8 1791 aa18.43■□□□□ 0.54
CCDC40-201ENST00000269318 POLR2AP24928 1970 aaKnown RBP18.43■□□□□ 0.54
CCDC40-201ENST00000269318 DYNC1I1O14576 645 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 ITGB3BPQ13352 177 aaPredicted RBP18.42■□□□□ 0.54
CCDC40-201ENST00000269318 COG2Q14746 738 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 SYCP1Q15431 976 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 VWA3BQ502W6 1294 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 C1orf186Q6ZWK4 172 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 ZHX3Q9H4I2 956 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 RNF146Q9NTX7 359 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 COL11A1P12107 1806 aaPredicted RBP18.42■□□□□ 0.54
CCDC40-201ENST00000269318 WDR90Q96KV7 1748 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 RSPH10B2B2RC85 870 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 ATP2A1O14983 1001 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 ZBTB39O15060 712 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 RSPH10BP0C881 870 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 EIF2AK2P19525 551 aaKnown RBP18.42■□□□□ 0.54
CCDC40-201ENST00000269318 ERVK-24P63145 666 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 MAN2A1Q16706 1144 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 SH3D19Q5HYK7 790 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.42■□□□□ 0.54
CCDC40-201ENST00000269318 TMTC1Q8IUR5 882 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 NELFCDQ8IXH7 590 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 RETREG2Q8NC44 543 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 KIF18AQ8NI77 898 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 CEP63Q96MT8 703 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 DNAJC7Q99615 494 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 PDCD2LQ9BRP1 358 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 DESI2Q9BSY9 194 aa18.42■□□□□ 0.54
CCDC40-201ENST00000269318 PXMP2Q9NR77 195 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms