RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 GIMAP8Q8ND71 665 aaPredicted RBP15.75■□□□□ 0.11
SS18-201ENST00000269137 DDX12PQ92771 950 aa15.75■□□□□ 0.11
SS18-201ENST00000269137 DYDC2Q96IM9 177 aa15.75■□□□□ 0.11
SS18-201ENST00000269137 MMP19Q99542 508 aa15.75■□□□□ 0.11
SS18-201ENST00000269137 ZCCHC17Q9NP64 241 aaKnown RBP15.75■□□□□ 0.11
SS18-201ENST00000269137 NFASCO94856 1347 aa15.75■□□□□ 0.11
SS18-201ENST00000269137 LOC102724159A0A0B4J2E5 919 aa15.75■□□□□ 0.11
SS18-201ENST00000269137 MANSC4A6NHS7 340 aaPredicted RBP15.75■□□□□ 0.11
SS18-201ENST00000269137 ADCY5O95622 1261 aa15.75■□□□□ 0.11
SS18-201ENST00000269137 EYA4O95677 639 aa15.75■□□□□ 0.11
SS18-201ENST00000269137 FCER1AP12319 257 aa15.75■□□□□ 0.11
SS18-201ENST00000269137 PSMC6P62333 389 aa15.75■□□□□ 0.11
SS18-201ENST00000269137 PWP2Q15269 919 aaKnown RBP15.75■□□□□ 0.11
SS18-201ENST00000269137 MIER3Q7Z3K6 550 aa15.75■□□□□ 0.11
SS18-201ENST00000269137 SYT2Q8N9I0 419 aaPredicted RBP15.75■□□□□ 0.11
SS18-201ENST00000269137 RDM1Q8NG50 284 aa15.75■□□□□ 0.11
SS18-201ENST00000269137 DNAJC19Q96DA6 116 aa15.75■□□□□ 0.11
SS18-201ENST00000269137 SENP7Q9BQF6 1050 aa15.75■□□□□ 0.11
SS18-201ENST00000269137 EXOC1Q9NV70 894 aa15.75■□□□□ 0.11
SS18-201ENST00000269137 PKD2L1Q9P0L9 805 aa15.75■□□□□ 0.11
SS18-201ENST00000269137 ZNFX1Q9P2E3 1918 aaKnown RBP15.74■□□□□ 0.11
SS18-201ENST00000269137 KCNA2P16389 499 aa15.74■□□□□ 0.11
SS18-201ENST00000269137 SFNP31947 248 aa15.74■□□□□ 0.11
SS18-201ENST00000269137 JAK3P52333 1124 aa15.74■□□□□ 0.11
SS18-201ENST00000269137 CTTNQ14247 550 aaKnown RBP15.74■□□□□ 0.11
SS18-201ENST00000269137 ZNF746Q6NUN9 644 aaPredicted RBP15.74■□□□□ 0.11
SS18-201ENST00000269137 TPH2Q8IWU9 490 aa15.74■□□□□ 0.11
SS18-201ENST00000269137 SMYD4Q8IYR2 804 aaPredicted RBP15.74■□□□□ 0.11
SS18-201ENST00000269137 ANKRD13CQ8N6S4 541 aa15.74■□□□□ 0.11
SS18-201ENST00000269137 NACC1Q96RE7 527 aa15.74■□□□□ 0.11
SS18-201ENST00000269137 MPHOSPH6Q99547 160 aaKnown RBP15.74■□□□□ 0.11
SS18-201ENST00000269137 PORCNQ9H237 461 aa15.74■□□□□ 0.11
SS18-201ENST00000269137 HSD3B7Q9H2F3 369 aa15.74■□□□□ 0.11
SS18-201ENST00000269137 DDX39AO00148 427 aaKnown RBP15.73■□□□□ 0.11
SS18-201ENST00000269137 KIF3CO14782 793 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 SSBP05455 408 aaKnown RBP eCLIP15.73■□□□□ 0.11
SS18-201ENST00000269137 P4HBP07237 508 aaKnown RBP15.73■□□□□ 0.11
SS18-201ENST00000269137 CYP11B2P19099 503 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 PLCB2Q00722 1185 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 EHHADHQ08426 723 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 PDE4DQ08499 809 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 COBLL1Q53SF7 1204 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 GPBP1Q86WP2 473 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 ABRAQ8N0Z2 381 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 SMC1BQ8NDV3 1235 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 FGD4Q96M96 766 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 MED15Q96RN5 788 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 TLL2Q9Y6L7 1015 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 WDR64B1ANS9 1081 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 LYPLA2O95372 231 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 SLC10A3P09131 477 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 PPP1R2P41236 205 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 FSTL1Q12841 308 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 PSMD2Q13200 908 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 ARSHQ5FYA8 562 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 DYMQ7RTS9 669 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 ADSSL1Q8N142 457 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 LXNQ9BS40 222 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 ZSWIM4Q9H7M6 989 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 EFCC1Q9HA90 598 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 TCEAL9Q9UHQ7 104 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 RWDD2AQ9UIY3 292 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 GDAQ9Y2T3 454 aa15.73■□□□□ 0.11
SS18-201ENST00000269137 STRNO43815 780 aa15.72■□□□□ 0.11
SS18-201ENST00000269137 CCNE2O96020 404 aa15.72■□□□□ 0.11
SS18-201ENST00000269137 PGK2P07205 417 aa15.72■□□□□ 0.11
SS18-201ENST00000269137 PRCPP42785 496 aa15.72■□□□□ 0.11
SS18-201ENST00000269137 INHBEP58166 350 aa15.72■□□□□ 0.11
SS18-201ENST00000269137 STIM1Q13586 685 aa15.72■□□□□ 0.11
SS18-201ENST00000269137 FAM110CQ1W6H9 321 aa15.72■□□□□ 0.11
SS18-201ENST00000269137 SPATA1Q5VX52 437 aa15.72■□□□□ 0.11
SS18-201ENST00000269137 MORC4Q8TE76 937 aa15.72■□□□□ 0.11
SS18-201ENST00000269137 BHMT2Q9H2M3 363 aa15.72■□□□□ 0.11
SS18-201ENST00000269137 LOXHD1Q8IVV2 1947 aa15.72■□□□□ 0.11
SS18-201ENST00000269137 FRMD3A2A2Y4 597 aa15.71■□□□□ 0.11
SS18-201ENST00000269137 TGFB3P10600 412 aa15.71■□□□□ 0.11
SS18-201ENST00000269137 QARSP47897 775 aaKnown RBP15.71■□□□□ 0.11
SS18-201ENST00000269137 ZNF75DP51815 510 aa15.71■□□□□ 0.11
SS18-201ENST00000269137 STK4Q13043 487 aa15.71■□□□□ 0.11
SS18-201ENST00000269137 WDR78Q5VTH9 848 aa15.71■□□□□ 0.11
SS18-201ENST00000269137 KLHL10Q6JEL2 608 aa15.71■□□□□ 0.11
SS18-201ENST00000269137 CCDC65Q8IXS2 484 aa15.71■□□□□ 0.11
SS18-201ENST00000269137 SMAP1Q8IYB5 467 aaPredicted RBP15.71■□□□□ 0.11
SS18-201ENST00000269137 DHTKD1Q96HY7 919 aaPredicted RBP15.71■□□□□ 0.11
SS18-201ENST00000269137 TRIM5Q9C035 493 aa15.71■□□□□ 0.11
SS18-201ENST00000269137 FANCLQ9NW38 375 aa15.71■□□□□ 0.11
SS18-201ENST00000269137 WRAP73Q9P2S5 460 aaPredicted RBP15.71■□□□□ 0.11
SS18-201ENST00000269137 NFE2L3Q9Y4A8 694 aa15.71■□□□□ 0.11
SS18-201ENST00000269137 IDEP14735 1019 aa15.71■□□□□ 0.1
SS18-201ENST00000269137 ZNF18P17022 549 aa15.71■□□□□ 0.1
SS18-201ENST00000269137 PAK1Q13153 545 aa15.71■□□□□ 0.1
SS18-201ENST00000269137 BANK1Q8NDB2 785 aa15.71■□□□□ 0.1
SS18-201ENST00000269137 PIGOQ8TEQ8 1089 aa15.71■□□□□ 0.1
SS18-201ENST00000269137 CCDC102AQ96A19 550 aa15.71■□□□□ 0.1
SS18-201ENST00000269137 HHIPL1Q96JK4 782 aa15.71■□□□□ 0.1
SS18-201ENST00000269137 JPH1Q9HDC5 661 aaPredicted RBP15.71■□□□□ 0.1
SS18-201ENST00000269137 PANK4Q9NVE7 773 aa15.71■□□□□ 0.1
SS18-201ENST00000269137 KCND2Q9NZV8 630 aa15.71■□□□□ 0.1
SS18-201ENST00000269137 SAMM50Q9Y512 469 aa15.71■□□□□ 0.1
SS18-201ENST00000269137 PCDHA10Q9Y5I2 948 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms