RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 TRAPPC3LQ5T215 181 aa24.37■■□□□ 1.49
CDR2-201ENST00000268383 EMBQ6PCB8 327 aa24.37■■□□□ 1.49
CDR2-201ENST00000268383 CASKIN2Q8WXE0 1202 aa24.37■■□□□ 1.49
CDR2-201ENST00000268383 PSTPIP2Q9H939 334 aa24.37■■□□□ 1.49
CDR2-201ENST00000268383 MYH4Q9Y623 1939 aa24.37■■□□□ 1.49
CDR2-201ENST00000268383 RBAK-RBAKDNI3L0D1 243 aa24.37■■□□□ 1.49
CDR2-201ENST00000268383 IL1R1P14778 569 aa24.37■■□□□ 1.49
CDR2-201ENST00000268383 SCNN1DP51172 638 aa24.37■■□□□ 1.49
CDR2-201ENST00000268383 PSMC6P62333 389 aa24.37■■□□□ 1.49
CDR2-201ENST00000268383 ORC2Q13416 577 aaPredicted RBP24.37■■□□□ 1.49
CDR2-201ENST00000268383 EMILIN3Q9NT22 766 aa24.37■■□□□ 1.49
CDR2-201ENST00000268383 GRID2IPA4D2P6 1211 aa24.36■■□□□ 1.49
CDR2-201ENST00000268383 ZNF233A6NK53 670 aa24.36■■□□□ 1.49
CDR2-201ENST00000268383 MED24O75448 989 aa24.36■■□□□ 1.49
CDR2-201ENST00000268383 KRT18P05783 430 aaKnown RBP24.36■■□□□ 1.49
CDR2-201ENST00000268383 PLCG2P16885 1265 aa24.36■■□□□ 1.49
CDR2-201ENST00000268383 CLK2P49760 499 aaKnown RBP24.36■■□□□ 1.49
CDR2-201ENST00000268383 SLC18A3Q16572 532 aa24.36■■□□□ 1.49
CDR2-201ENST00000268383 PPP4R3AQ6IN85 833 aa24.36■■□□□ 1.49
CDR2-201ENST00000268383 PROM2Q8N271 834 aa24.36■■□□□ 1.49
CDR2-201ENST00000268383 RNF10Q8N5U6 811 aaKnown RBP24.36■■□□□ 1.49
CDR2-201ENST00000268383 CUL5Q93034 780 aa24.36■■□□□ 1.49
CDR2-201ENST00000268383 GOLGA8KD6RF30 607 aa24.36■■□□□ 1.49
CDR2-201ENST00000268383 SNHG28P0DPA3 235 aa24.36■■□□□ 1.49
CDR2-201ENST00000268383 KCNH2Q12809 1159 aa24.36■■□□□ 1.49
CDR2-201ENST00000268383 KCTD10Q9H3F6 313 aa24.36■■□□□ 1.49
CDR2-201ENST00000268383 EIF3HO15372 352 aaKnown RBP eCLIP24.35■■□□□ 1.49
CDR2-201ENST00000268383 ZEB2O60315 1214 aa24.35■■□□□ 1.49
CDR2-201ENST00000268383 CYP11B2P19099 503 aa24.35■■□□□ 1.49
CDR2-201ENST00000268383 EPS15P42566 896 aa24.35■■□□□ 1.49
CDR2-201ENST00000268383 GABPAQ06546 454 aa24.35■■□□□ 1.49
CDR2-201ENST00000268383 NNTQ13423 1086 aa24.35■■□□□ 1.49
CDR2-201ENST00000268383 ARSHQ5FYA8 562 aa24.35■■□□□ 1.49
CDR2-201ENST00000268383 BMP2KQ9NSY1 1161 aaPredicted RBP24.35■■□□□ 1.49
CDR2-201ENST00000268383 OPA1O60313 960 aa24.35■■□□□ 1.49
CDR2-201ENST00000268383 LIG3P49916 1009 aa24.35■■□□□ 1.49
CDR2-201ENST00000268383 PTK2Q05397 1052 aa24.35■■□□□ 1.49
CDR2-201ENST00000268383 PLCD3Q8N3E9 789 aa24.35■■□□□ 1.49
CDR2-201ENST00000268383 TBC1D16Q8TBP0 767 aa24.35■■□□□ 1.49
CDR2-201ENST00000268383 RAD51CO43502 376 aa24.34■■□□□ 1.49
CDR2-201ENST00000268383 TTLL1O95922 423 aa24.34■■□□□ 1.49
CDR2-201ENST00000268383 MEI1Q5TIA1 1274 aa24.34■■□□□ 1.49
CDR2-201ENST00000268383 IFT20Q8IY31 132 aa24.34■■□□□ 1.49
CDR2-201ENST00000268383 CAVIN3Q969G5 261 aa24.34■■□□□ 1.49
CDR2-201ENST00000268383 IKZF4Q9H2S9 585 aa24.34■■□□□ 1.49
CDR2-201ENST00000268383 GDF3Q9NR23 364 aa24.34■■□□□ 1.49
CDR2-201ENST00000268383 GAKO14976 1311 aa24.34■■□□□ 1.49
CDR2-201ENST00000268383 NR2F2P24468 414 aa24.34■■□□□ 1.49
CDR2-201ENST00000268383 AHDC1Q5TGY3 1603 aaPredicted RBP24.34■■□□□ 1.49
CDR2-201ENST00000268383 PIK3R5Q8WYR1 880 aa24.34■■□□□ 1.49
CDR2-201ENST00000268383 GANQ9H2C0 597 aa24.34■■□□□ 1.49
CDR2-201ENST00000268383 KCNK3O14649 394 aa24.34■■□□□ 1.49
CDR2-201ENST00000268383 ASIC2Q16515 512 aa24.34■■□□□ 1.49
CDR2-201ENST00000268383 SLC30A10Q6XR72 485 aa24.34■■□□□ 1.49
CDR2-201ENST00000268383 DDX42Q86XP3 938 aaKnown RBP eCLIP24.34■■□□□ 1.49
CDR2-201ENST00000268383 CCDC65Q8IXS2 484 aa24.34■■□□□ 1.49
CDR2-201ENST00000268383 MICALL1Q8N3F8 863 aa24.34■■□□□ 1.49
CDR2-201ENST00000268383 INPP4AQ96PE3 977 aaPredicted RBP24.34■■□□□ 1.49
CDR2-201ENST00000268383 ARFGEF1Q9Y6D6 1849 aa24.33■■□□□ 1.49
CDR2-201ENST00000268383 GUCY1A3Q02108 690 aa24.33■■□□□ 1.49
CDR2-201ENST00000268383 PABPC4Q13310 644 aaKnown RBP eCLIP24.33■■□□□ 1.49
CDR2-201ENST00000268383 TTC31Q49AM3 519 aaPredicted RBP24.33■■□□□ 1.49
CDR2-201ENST00000268383 CFAP58Q5T655 872 aa24.33■■□□□ 1.49
CDR2-201ENST00000268383 ZNF571Q7Z3V5 609 aaPredicted RBP24.33■■□□□ 1.49
CDR2-201ENST00000268383 P2RX7Q99572 595 aaKnown RBP24.33■■□□□ 1.49
CDR2-201ENST00000268383 LRRC27Q9C0I9 530 aa24.33■■□□□ 1.49
CDR2-201ENST00000268383 IGKV6D-41A0A0C4DH26 115 aa24.33■■□□□ 1.48
CDR2-201ENST00000268383 hCG_1984214I3L0E3 225 aa24.33■■□□□ 1.48
CDR2-201ENST00000268383 ZNF713Q8N859 430 aaPredicted RBP24.33■■□□□ 1.48
CDR2-201ENST00000268383 AP1M1Q9BXS5 423 aa24.33■■□□□ 1.48
CDR2-201ENST00000268383 EDEM3Q9BZQ6 932 aa24.33■■□□□ 1.48
CDR2-201ENST00000268383 AJAP1Q9UKB5 411 aaPredicted RBP24.33■■□□□ 1.48
CDR2-201ENST00000268383 FAM169AQ9Y6X4 670 aa24.33■■□□□ 1.48
CDR2-201ENST00000268383 ZBTB5O15062 677 aa24.32■■□□□ 1.48
CDR2-201ENST00000268383 ATP2B4P23634 1241 aa24.32■■□□□ 1.48
CDR2-201ENST00000268383 SHMT1P34896 483 aa24.32■■□□□ 1.48
CDR2-201ENST00000268383 NOP2P46087 812 aaKnown RBP24.32■■□□□ 1.48
CDR2-201ENST00000268383 MRPL12P52815 198 aaKnown RBP24.32■■□□□ 1.48
CDR2-201ENST00000268383 ALS2CLQ60I27 953 aa24.32■■□□□ 1.48
CDR2-201ENST00000268383 GJB7Q6PEY0 223 aa24.32■■□□□ 1.48
CDR2-201ENST00000268383 IQCKQ8N0W5 287 aa24.32■■□□□ 1.48
CDR2-201ENST00000268383 RNPC3Q96LT9 517 aaKnown RBP24.32■■□□□ 1.48
CDR2-201ENST00000268383 CACNB3P54284 484 aa24.32■■□□□ 1.48
CDR2-201ENST00000268383 DCAF17Q5H9S7 520 aaPredicted RBP24.32■■□□□ 1.48
CDR2-201ENST00000268383 ZFPM1Q8IX07 1006 aa24.32■■□□□ 1.48
CDR2-201ENST00000268383 CERS5Q8N5B7 392 aa24.32■■□□□ 1.48
CDR2-201ENST00000268383 FAM163AQ96GL9 167 aaPredicted RBP24.32■■□□□ 1.48
CDR2-201ENST00000268383 NGLY1Q96IV0 654 aa24.32■■□□□ 1.48
CDR2-201ENST00000268383 SERPINB13Q9UIV8 391 aa24.32■■□□□ 1.48
CDR2-201ENST00000268383 HDAC9Q9UKV0 1011 aa24.32■■□□□ 1.48
CDR2-201ENST00000268383 PCDHGC5Q9Y5F6 944 aa24.32■■□□□ 1.48
CDR2-201ENST00000268383 BTAF1O14981 1849 aa24.31■■□□□ 1.48
CDR2-201ENST00000268383 EBAG9O00559 213 aa24.31■■□□□ 1.48
CDR2-201ENST00000268383 C15orf52Q6ZUT6 534 aaKnown RBP24.31■■□□□ 1.48
CDR2-201ENST00000268383 CENPHQ9H3R5 247 aa24.31■■□□□ 1.48
CDR2-201ENST00000268383 RSPH10B2B2RC85 870 aa24.31■■□□□ 1.48
CDR2-201ENST00000268383 RGL2O15211 777 aa24.31■■□□□ 1.48
CDR2-201ENST00000268383 RSPH10BP0C881 870 aa24.31■■□□□ 1.48
CDR2-201ENST00000268383 KCNA1Q09470 495 aa24.31■■□□□ 1.48
CDR2-201ENST00000268383 OR2W6PQ8NHA6 318 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms