RNA–Protein interactions for RNA: ENST00000266742.8

NEDD1-201, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEDD1, Length 4,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-201ENST00000266742 MTMR8Q96EF0 704 aa9.02□□□□□ -0.96
NEDD1-201ENST00000266742 FAM20AQ96MK3 541 aa9.02□□□□□ -0.96
NEDD1-201ENST00000266742 ATF5Q9Y2D1 282 aaPredicted RBP9.02□□□□□ -0.96
NEDD1-201ENST00000266742 CYP3A7-CYP3A51PA0A087WV96 503 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 USP17L15C9J2P7 530 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 USP17L13C9JLJ4 530 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 USP17L11C9JVI0 530 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 USP17L18D6R9N7 530 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 USP17L22D6RA61 530 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 USP17L17D6RBQ6 530 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 USP17L19D6RCP7 530 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 USP17L20D6RJB6 530 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 SYF2O95926 243 aaKnown RBP9.02□□□□□ -0.97
NEDD1-201ENST00000266742 CYP11B2P19099 503 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 CYP3A7P24462 503 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 USP17L24Q0WX57 530 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 NNTQ13423 1086 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 NAB2Q15742 525 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 ASTE1Q2TB18 679 aaPredicted RBP9.02□□□□□ -0.97
NEDD1-201ENST00000266742 USP17L6PQ6QN14 398 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 DDX4Q9NQI0 724 aaKnown RBP9.02□□□□□ -0.97
NEDD1-201ENST00000266742 AIPL1Q9NZN9 384 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 FLOT1O75955 427 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 AFPP02771 609 aaKnown RBP9.02□□□□□ -0.97
NEDD1-201ENST00000266742 EPB41P11171 864 aaKnown RBP9.02□□□□□ -0.97
NEDD1-201ENST00000266742 ANXA13P27216 316 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 ARHGAP4P98171 946 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 KCNH2Q12809 1159 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 PRR16Q569H4 304 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 FMNL3Q8IVF7 1028 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 GJD4Q96KN9 370 aaPredicted RBP9.02□□□□□ -0.97
NEDD1-201ENST00000266742 KCNMB3Q9NPA1 279 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 BTAF1O14981 1849 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 UBAP1LF5GYI3 381 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 PPP1R11O60927 126 aaPredicted RBP9.02□□□□□ -0.97
NEDD1-201ENST00000266742 ENOX2Q16206 610 aaKnown RBP9.02□□□□□ -0.97
NEDD1-201ENST00000266742 ECM1Q16610 540 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 KNOP1Q1ED39 458 aaKnown RBP9.02□□□□□ -0.97
NEDD1-201ENST00000266742 HGSNATQ68CP4 663 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 STXBP4Q6ZWJ1 553 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 SLC51AQ86UW1 340 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 FBXO11Q86XK2 927 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 SCFD1Q8WVM8 642 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 MKL1Q969V6 931 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 ZBTB9Q96C00 473 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 TRERF1Q96PN7 1200 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 RASSF4Q9H2L5 321 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 ADAMTS1Q9UHI8 967 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 HDAC9Q9UKV0 1011 aa9.02□□□□□ -0.97
NEDD1-201ENST00000266742 DDX60LQ5H9U9 1706 aaKnown RBP9.01□□□□□ -0.97
NEDD1-201ENST00000266742 TULP2O00295 520 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 PDXKO00764 312 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 PPFIA4O75335 1185 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 PALMO75781 387 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 EEF2P13639 858 aaKnown RBP9.01□□□□□ -0.97
NEDD1-201ENST00000266742 NPR1P16066 1061 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 RPA1P27694 616 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 TNFRSF8P28908 595 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 NOP2P46087 812 aaKnown RBP9.01□□□□□ -0.97
NEDD1-201ENST00000266742 RPS6KA1Q15418 735 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 EXOC3L4Q17RC7 722 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 KLHDC7AQ5VTJ3 777 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 TCERG1LQ5VWI1 586 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 PODNQ7Z5L7 613 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 FAM133AQ8N9E0 248 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 TLR10Q9BXR5 811 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 RSPH14Q9UHP6 348 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 SPATA31A6Q5VVP1 1343 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 SHTN1A0MZ66 631 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 KLRG2A4D1S0 409 aaPredicted RBP9.01□□□□□ -0.97
NEDD1-201ENST00000266742 CLSTN1O94985 981 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 ICA1Q05084 483 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 DOK7Q18PE1 504 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 TMEM179Q6ZVK1 233 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 GSPT2Q8IYD1 628 aaKnown RBP9.01□□□□□ -0.97
NEDD1-201ENST00000266742 GLIS3Q8NEA6 775 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.01□□□□□ -0.97
NEDD1-201ENST00000266742 PLCB1Q9NQ66 1216 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 TRAF3IP3Q9Y228 551 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 NHSQ6T4R5 1651 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 CRKP46108 304 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 DNAJC21Q5F1R6 531 aaKnown RBP9.01□□□□□ -0.97
NEDD1-201ENST00000266742 CFAP58Q5T655 872 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 SYT2Q8N9I0 419 aaPredicted RBP9.01□□□□□ -0.97
NEDD1-201ENST00000266742 CAVIN3Q969G5 261 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 KCTD10Q9H3F6 313 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 LRRC4BQ9NT99 713 aa9.01□□□□□ -0.97
NEDD1-201ENST00000266742 DMGDHQ9UI17 866 aaKnown RBP9.01□□□□□ -0.97
NEDD1-201ENST00000266742 RRP15Q9Y3B9 282 aaKnown RBP9.01□□□□□ -0.97
NEDD1-201ENST00000266742 MYH1P12882 1939 aa9□□□□□ -0.97
NEDD1-201ENST00000266742 NKRFO15226 690 aaKnown RBP eCLIP9□□□□□ -0.97
NEDD1-201ENST00000266742 NCK2O43639 380 aa9□□□□□ -0.97
NEDD1-201ENST00000266742 EDIL3O43854 480 aa9□□□□□ -0.97
NEDD1-201ENST00000266742 PRPF6O94906 941 aaKnown RBP9□□□□□ -0.97
NEDD1-201ENST00000266742 CCDC172P0C7W6 258 aa9□□□□□ -0.97
NEDD1-201ENST00000266742 GAP43P17677 238 aa9□□□□□ -0.97
NEDD1-201ENST00000266742 PDE6BP35913 854 aa9□□□□□ -0.97
NEDD1-201ENST00000266742 SLC7A5Q01650 507 aa9□□□□□ -0.97
NEDD1-201ENST00000266742 CACNB1Q02641 598 aaPredicted RBP9□□□□□ -0.97
NEDD1-201ENST00000266742 PABPC4Q13310 644 aaKnown RBP eCLIP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms