RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 MAD2L2Q9UI95 211 aa21.71■■□□□ 1.07
CSPG5-201ENST00000264723 POTEFA5A3E0 1075 aa21.71■■□□□ 1.07
CSPG5-201ENST00000264723 POTEIP0CG38 1075 aa21.71■■□□□ 1.07
CSPG5-201ENST00000264723 CTNNA1P35221 906 aaKnown RBP21.71■■□□□ 1.07
CSPG5-201ENST00000264723 POTEGQ6S5H5 508 aa21.71■■□□□ 1.07
CSPG5-201ENST00000264723 POTEEQ6S8J3 1075 aa21.71■■□□□ 1.07
CSPG5-201ENST00000264723 NLRX1Q86UT6 975 aa21.71■■□□□ 1.07
CSPG5-201ENST00000264723 CEP57Q86XR8 500 aa21.71■■□□□ 1.07
CSPG5-201ENST00000264723 SPATA4Q8NEY3 305 aa21.71■■□□□ 1.07
CSPG5-201ENST00000264723 FNBP1Q96RU3 617 aa21.71■■□□□ 1.07
CSPG5-201ENST00000264723 L1RE1Q9UN81 338 aa21.71■■□□□ 1.07
CSPG5-201ENST00000264723 GRIK5Q16478 980 aa21.7■■□□□ 1.07
CSPG5-201ENST00000264723 XKR9Q5GH70 373 aa21.7■■□□□ 1.07
CSPG5-201ENST00000264723 FAM83BQ5T0W9 1011 aa21.7■■□□□ 1.07
CSPG5-201ENST00000264723 FAM102BQ5T8I3 360 aa21.7■■□□□ 1.07
CSPG5-201ENST00000264723 FAM237AA0A1B0GTK4 181 aa21.7■■□□□ 1.06
CSPG5-201ENST00000264723 APBA1Q02410 837 aa21.7■■□□□ 1.06
CSPG5-201ENST00000264723 TMEM179Q6ZVK1 233 aa21.7■■□□□ 1.06
CSPG5-201ENST00000264723 PAXIP1Q6ZW49 1069 aaPredicted RBP21.7■■□□□ 1.06
CSPG5-201ENST00000264723 ZNF577Q9BSK1 485 aa21.7■■□□□ 1.06
CSPG5-201ENST00000264723 CTTNBP2NLQ9P2B4 639 aa21.7■■□□□ 1.06
CSPG5-201ENST00000264723 GFPT2O94808 682 aa21.7■■□□□ 1.06
CSPG5-201ENST00000264723 ARHGEF16Q5VV41 709 aa21.7■■□□□ 1.06
CSPG5-201ENST00000264723 TMED8Q6PL24 325 aaPredicted RBP21.7■■□□□ 1.06
CSPG5-201ENST00000264723 FAM184BQ9ULE4 1060 aa21.7■■□□□ 1.06
CSPG5-201ENST00000264723 ATP6V0A2Q9Y487 856 aa21.7■■□□□ 1.06
CSPG5-201ENST00000264723 NFIAQ12857 509 aa21.7■■□□□ 1.06
CSPG5-201ENST00000264723 SLC10A5Q5PT55 438 aa21.7■■□□□ 1.06
CSPG5-201ENST00000264723 CCDC114Q96M63 670 aa21.7■■□□□ 1.06
CSPG5-201ENST00000264723 CAPN6Q9Y6Q1 641 aa21.7■■□□□ 1.06
CSPG5-201ENST00000264723 EIF3CLB5ME19 914 aaKnown RBP21.69■■□□□ 1.06
CSPG5-201ENST00000264723 HERVK_113P62684 666 aa21.69■■□□□ 1.06
CSPG5-201ENST00000264723 MAP2K1Q02750 393 aaPredicted RBP21.69■■□□□ 1.06
CSPG5-201ENST00000264723 CDC42EP5Q6NZY7 148 aa21.69■■□□□ 1.06
CSPG5-201ENST00000264723 EIF3CQ99613 913 aaKnown RBP21.69■■□□□ 1.06
CSPG5-201ENST00000264723 PAIP2Q9BPZ3 127 aaKnown RBP21.69■■□□□ 1.06
CSPG5-201ENST00000264723 STK17AQ9UEE5 414 aa21.69■■□□□ 1.06
CSPG5-201ENST00000264723 ITIH6Q6UXX5 1313 aa21.69■■□□□ 1.06
CSPG5-201ENST00000264723 K7ENM7 598 aa21.69■■□□□ 1.06
CSPG5-201ENST00000264723 MYL1P05976 194 aa21.69■■□□□ 1.06
CSPG5-201ENST00000264723 EIF2AK2P19525 551 aaKnown RBP21.69■■□□□ 1.06
CSPG5-201ENST00000264723 TNFAIP1Q13829 316 aa21.69■■□□□ 1.06
CSPG5-201ENST00000264723 MTRQ99707 1265 aa21.69■■□□□ 1.06
CSPG5-201ENST00000264723 A0A1W2PQC6 194 aa21.69■■□□□ 1.06
CSPG5-201ENST00000264723 SLURP2P0DP57 97 aa21.69■■□□□ 1.06
CSPG5-201ENST00000264723 GCFC2P16383 781 aaKnown RBP21.69■■□□□ 1.06
CSPG5-201ENST00000264723 COASYQ13057 564 aa21.69■■□□□ 1.06
CSPG5-201ENST00000264723 KCNB1Q14721 858 aa21.69■■□□□ 1.06
CSPG5-201ENST00000264723 ZNF341Q9BYN7 854 aa21.69■■□□□ 1.06
CSPG5-201ENST00000264723 MAGEF1Q9HAY2 307 aa21.69■■□□□ 1.06
CSPG5-201ENST00000264723 RGPD2P0DJD1 1756 aa21.69■■□□□ 1.06
CSPG5-201ENST00000264723 CYTH3O43739 400 aa21.68■■□□□ 1.06
CSPG5-201ENST00000264723 ACTN1P12814 892 aa21.68■■□□□ 1.06
CSPG5-201ENST00000264723 NNTQ13423 1086 aa21.68■■□□□ 1.06
CSPG5-201ENST00000264723 IMPG2Q9BZV3 1241 aa21.68■■□□□ 1.06
CSPG5-201ENST00000264723 STIM2Q9P246 746 aa21.68■■□□□ 1.06
CSPG5-201ENST00000264723 H2AFZP0C0S5 128 aa21.68■■□□□ 1.06
CSPG5-201ENST00000264723 MYZAPP0CAP1 466 aa21.68■■□□□ 1.06
CSPG5-201ENST00000264723 TTI2Q6NXR4 508 aa21.68■■□□□ 1.06
CSPG5-201ENST00000264723 H2AFVQ71UI9 128 aa21.68■■□□□ 1.06
CSPG5-201ENST00000264723 PCIF1Q9H4Z3 704 aa21.68■■□□□ 1.06
CSPG5-201ENST00000264723 DMGDHQ9UI17 866 aaKnown RBP21.68■■□□□ 1.06
CSPG5-201ENST00000264723 CAPN7Q9Y6W3 813 aa21.68■■□□□ 1.06
CSPG5-201ENST00000264723 SLC37A4O43826 429 aa21.68■■□□□ 1.06
CSPG5-201ENST00000264723 STAT1P42224 750 aa21.68■■□□□ 1.06
CSPG5-201ENST00000264723 SEPT7Q16181 437 aaKnown RBP21.68■■□□□ 1.06
CSPG5-201ENST00000264723 CCDC121Q6ZUS5 278 aa21.68■■□□□ 1.06
CSPG5-201ENST00000264723 SYNCQ9H7C4 482 aa21.68■■□□□ 1.06
CSPG5-201ENST00000264723 ARHGAP27Q6ZUM4 889 aa21.67■■□□□ 1.06
CSPG5-201ENST00000264723 SLC51AQ86UW1 340 aa21.67■■□□□ 1.06
CSPG5-201ENST00000264723 ARHGAP4P98171 946 aa21.67■■□□□ 1.06
CSPG5-201ENST00000264723 ELOA2Q8IYF1 753 aaPredicted RBP21.67■■□□□ 1.06
CSPG5-201ENST00000264723 CRAMP1Q96RY5 1269 aa21.67■■□□□ 1.06
CSPG5-201ENST00000264723 LARSQ9P2J5 1176 aaKnown RBP21.67■■□□□ 1.06
CSPG5-201ENST00000264723 FANCGO15287 622 aa21.67■■□□□ 1.06
CSPG5-201ENST00000264723 FOXR1Q6PIV2 292 aa21.67■■□□□ 1.06
CSPG5-201ENST00000264723 SH3RF1Q7Z6J0 888 aa21.67■■□□□ 1.06
CSPG5-201ENST00000264723 RAD54LQ92698 747 aa21.67■■□□□ 1.06
CSPG5-201ENST00000264723 MRRFQ96E11 262 aaKnown RBP21.67■■□□□ 1.06
CSPG5-201ENST00000264723 SNX12Q9UMY4 172 aa21.67■■□□□ 1.06
CSPG5-201ENST00000264723 SETD1AO15047 1707 aaKnown RBP21.67■■□□□ 1.06
CSPG5-201ENST00000264723 SPOPO43791 374 aa21.66■■□□□ 1.06
CSPG5-201ENST00000264723 PDHBP11177 359 aa21.66■■□□□ 1.06
CSPG5-201ENST00000264723 CCDC26Q8TAB7 109 aa21.66■■□□□ 1.06
CSPG5-201ENST00000264723 HDAC7Q8WUI4 952 aa21.66■■□□□ 1.06
CSPG5-201ENST00000264723 PPM1EQ8WY54 764 aa21.66■■□□□ 1.06
CSPG5-201ENST00000264723 SH2D3AQ9BRG2 576 aa21.66■■□□□ 1.06
CSPG5-201ENST00000264723 TEKT3Q9BXF9 490 aa21.66■■□□□ 1.06
CSPG5-201ENST00000264723 NF2P35240 595 aa21.66■■□□□ 1.06
CSPG5-201ENST00000264723 VPS41P49754 854 aa21.66■■□□□ 1.06
CSPG5-201ENST00000264723 EPHB4P54760 987 aa21.66■■□□□ 1.06
CSPG5-201ENST00000264723 E2F4Q16254 413 aa21.66■■□□□ 1.06
CSPG5-201ENST00000264723 RCSD1Q6JBY9 416 aa21.66■■□□□ 1.06
CSPG5-201ENST00000264723 CCDC50Q8IVM0 306 aa21.66■■□□□ 1.06
CSPG5-201ENST00000264723 PLCB3Q01970 1234 aa21.66■■□□□ 1.06
CSPG5-201ENST00000264723 KCNH2Q12809 1159 aa21.66■■□□□ 1.06
CSPG5-201ENST00000264723 CERKQ8TCT0 537 aa21.66■■□□□ 1.06
CSPG5-201ENST00000264723 RIC8AQ9NPQ8 531 aa21.66■■□□□ 1.06
CSPG5-201ENST00000264723 PLEKHG2Q9H7P9 1386 aa21.66■■□□□ 1.06
CSPG5-201ENST00000264723 GPR75-ASB3A0A0A6YYF3 556 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms