RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 ZNF496Q96IT1 587 aaPredicted RBP12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 AP2B1P63010 937 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 FAM133BQ5BKY9 247 aaKnown RBP12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 SHC4Q6S5L8 630 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 TEKT1Q969V4 418 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 PNKPQ96T60 521 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 ADD2P35612 726 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 GPBP1Q86WP2 473 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 MAGEC3Q8TD91 643 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 GNPTABQ3T906 1256 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 ATG16L1Q676U5 607 aa12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 ZBTB38Q8NAP3 1195 aaPredicted RBP12.63□□□□□ -0.39
DNMT3A-201ENST00000264709 PDS5AQ29RF7 1337 aaKnown RBP12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 ARHGAP42A6NI28 874 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 IL2RBP14784 551 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 CTSWP56202 376 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 PNMA2Q9UL42 364 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 SLC40A1Q9NP59 571 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 AGTPBP1Q9UPW5 1226 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 M0R2C6 588 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 LIN7AO14910 233 aaPredicted RBP12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 HSPA9P38646 679 aaKnown RBP12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 C1orf131Q8NDD1 294 aaKnown RBP12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 MROH7-TTC4A0A0A0MT08 1334 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 PDE8BO95263 885 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 NOA1Q8NC60 698 aaKnown RBP12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 RILPQ96NA2 401 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 MOCS3O95396 460 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 ATP1A1P05023 1023 aaKnown RBP12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 SKOR1P84550 965 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 STAG2Q8N3U4 1231 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 ERGIC2Q96RQ1 377 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 HAUS8Q9BT25 410 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 ROPN1BQ9BZX4 212 aaPredicted RBP12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 ROPN1Q9HAT0 212 aaPredicted RBP12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 SPAG7O75391 227 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 ZNF18P17022 549 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 DPH5Q9H2P9 285 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 VAT1LQ9HCJ6 419 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 PANK4Q9NVE7 773 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 INTUQ9ULD6 942 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 PLAGL2Q9UPG8 496 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 SCINQ9Y6U3 715 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 SASH1O94885 1247 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 GCNT3O95395 438 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 TXKP42681 527 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 SEC16BQ96JE7 1060 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 IL1RAPL1Q9NZN1 696 aa12.62□□□□□ -0.39
DNMT3A-201ENST00000264709 RIBC1Q8N443 379 aaPredicted RBP12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 PNMA1Q8ND90 353 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 NLRP7Q8WX94 980 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 MRPL40Q9NQ50 206 aaKnown RBP12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 ZNF446Q9NWS9 450 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 PALMO75781 387 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 NFRKBQ6P4R8 1299 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 ZNF662Q6ZS27 426 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 A0A087WWV3 80 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 POLE2P56282 527 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 SMYD4Q8IYR2 804 aaPredicted RBP12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 PCDHB6Q9Y5E3 794 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 ZFXP17010 805 aaPredicted RBP12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 EDC3Q96F86 508 aaKnown RBP12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 TGS1Q96RS0 853 aaKnown RBP12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 SERPINA10Q9UK55 444 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 GHRP10912 638 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 SGO2Q562F6 1265 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 MMS19Q96T76 1030 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 ISCUQ9H1K1 167 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 ANKZF1Q9H8Y5 726 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 TMEM232C9JQI7 657 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 ZNF449Q6P9G9 518 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 CXCR5P32302 372 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 PPM1FP49593 454 aaPredicted RBP12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 PACS2Q86VP3 889 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 GYG2O15488 501 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 NR5A1Q13285 461 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 TCIRG1Q13488 830 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 ALKBH8Q96BT7 664 aaKnown RBP12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 NLRP3Q96P20 1036 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 CCSER1Q9C0I3 900 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 HPSEQ9Y251 543 aa12.61□□□□□ -0.39
DNMT3A-201ENST00000264709 SMCO2A6NFE2 343 aa12.6□□□□□ -0.39
DNMT3A-201ENST00000264709 SRGNP10124 158 aa12.6□□□□□ -0.39
DNMT3A-201ENST00000264709 MROH1Q8NDA8 1641 aa12.6□□□□□ -0.39
DNMT3A-201ENST00000264709 SLC7A5Q01650 507 aa12.6□□□□□ -0.39
DNMT3A-201ENST00000264709 DDR1Q08345 913 aa12.6□□□□□ -0.39
DNMT3A-201ENST00000264709 DCUN1D2Q6PH85 259 aa12.6□□□□□ -0.39
DNMT3A-201ENST00000264709 PLIN2Q99541 437 aa12.6□□□□□ -0.39
DNMT3A-201ENST00000264709 HDAC6Q9UBN7 1215 aa12.6□□□□□ -0.39
DNMT3A-201ENST00000264709 ZNF609O15014 1411 aa12.6□□□□□ -0.39
DNMT3A-201ENST00000264709 PTPN12Q05209 780 aaKnown RBP12.6□□□□□ -0.39
DNMT3A-201ENST00000264709 FAM83BQ5T0W9 1011 aa12.6□□□□□ -0.39
DNMT3A-201ENST00000264709 NOD2Q9HC29 1040 aa12.6□□□□□ -0.39
DNMT3A-201ENST00000264709 PCDHA12Q9UN75 941 aa12.6□□□□□ -0.39
DNMT3A-201ENST00000264709 CES2O00748 559 aa12.6□□□□□ -0.39
DNMT3A-201ENST00000264709 FOSP01100 380 aaPredicted RBP12.6□□□□□ -0.39
DNMT3A-201ENST00000264709 NSFP46459 744 aaKnown RBP12.6□□□□□ -0.39
DNMT3A-201ENST00000264709 SLC18A3Q16572 532 aa12.6□□□□□ -0.39
DNMT3A-201ENST00000264709 NSMCE1Q8WV22 266 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms