RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 XRCC5P13010 732 aaKnown RBP17.9■□□□□ 0.46
CTCF-201ENST00000264010 STAT3P40763 770 aa17.9■□□□□ 0.46
CTCF-201ENST00000264010 CENPPQ6IPU0 288 aa17.9■□□□□ 0.46
CTCF-201ENST00000264010 PNMA5Q96PV4 448 aa17.9■□□□□ 0.46
CTCF-201ENST00000264010 DUSP9Q99956 384 aaKnown RBP17.9■□□□□ 0.46
CTCF-201ENST00000264010 METTL14Q9HCE5 456 aaKnown RBP17.9■□□□□ 0.46
CTCF-201ENST00000264010 AGPAT5Q9NUQ2 364 aa17.9■□□□□ 0.46
CTCF-201ENST00000264010 KLRG2A4D1S0 409 aaPredicted RBP17.9■□□□□ 0.46
CTCF-201ENST00000264010 CCDC172P0C7W6 258 aa17.9■□□□□ 0.46
CTCF-201ENST00000264010 SNHG28P0DPA3 235 aa17.9■□□□□ 0.46
CTCF-201ENST00000264010 ERGIC2Q96RQ1 377 aa17.9■□□□□ 0.46
CTCF-201ENST00000264010 MRIQ9BWK5 157 aa17.9■□□□□ 0.46
CTCF-201ENST00000264010 PNMA6AP0CW24 399 aaPredicted RBP17.9■□□□□ 0.46
CTCF-201ENST00000264010 KRT13P13646 458 aa17.9■□□□□ 0.46
CTCF-201ENST00000264010 GRIPAP1Q4V328 841 aa17.9■□□□□ 0.46
CTCF-201ENST00000264010 IDI2Q9BXS1 227 aa17.9■□□□□ 0.46
CTCF-201ENST00000264010 FRMD4BQ9Y2L6 1034 aa17.9■□□□□ 0.46
CTCF-201ENST00000264010 SNED1Q8TER0 1413 aa17.9■□□□□ 0.46
CTCF-201ENST00000264010 CCDC88AQ3V6T2 1871 aa17.89■□□□□ 0.46
CTCF-201ENST00000264010 GOLGA6L7A0A1B0GV03 622 aa17.89■□□□□ 0.45
CTCF-201ENST00000264010 ZFPM1Q8IX07 1006 aa17.89■□□□□ 0.45
CTCF-201ENST00000264010 GJA10Q969M2 543 aa17.89■□□□□ 0.45
CTCF-201ENST00000264010 PLIN4Q96Q06 1357 aa17.89■□□□□ 0.45
CTCF-201ENST00000264010 DNAJC7Q99615 494 aa17.89■□□□□ 0.45
CTCF-201ENST00000264010 LAMB2P55268 1798 aa17.89■□□□□ 0.45
CTCF-201ENST00000264010 POTEFA5A3E0 1075 aa17.89■□□□□ 0.45
CTCF-201ENST00000264010 TBX3O15119 743 aa17.89■□□□□ 0.45
CTCF-201ENST00000264010 POTEIP0CG38 1075 aa17.89■□□□□ 0.45
CTCF-201ENST00000264010 KIF11P52732 1056 aa17.89■□□□□ 0.45
CTCF-201ENST00000264010 POTEGQ6S5H5 508 aa17.89■□□□□ 0.45
CTCF-201ENST00000264010 POTEEQ6S8J3 1075 aa17.89■□□□□ 0.45
CTCF-201ENST00000264010 BLOC1S4Q9NUP1 217 aa17.89■□□□□ 0.45
CTCF-201ENST00000264010 PKD2L1Q9P0L9 805 aa17.89■□□□□ 0.45
CTCF-201ENST00000264010 CASZ1Q86V15 1759 aa17.89■□□□□ 0.45
CTCF-201ENST00000264010 GAP43P17677 238 aa17.89■□□□□ 0.45
CTCF-201ENST00000264010 FKBP1AP62942 108 aaKnown RBP17.89■□□□□ 0.45
CTCF-201ENST00000264010 BIRC2Q13490 618 aa17.89■□□□□ 0.45
CTCF-201ENST00000264010 FAM160B2Q86V87 743 aa17.89■□□□□ 0.45
CTCF-201ENST00000264010 TBC1D5Q92609 795 aa17.89■□□□□ 0.45
CTCF-201ENST00000264010 ERLIN2O94905 339 aa17.88■□□□□ 0.45
CTCF-201ENST00000264010 DACT2Q5SW24 774 aa17.88■□□□□ 0.45
CTCF-201ENST00000264010 TRMT1LQ7Z2T5 733 aaKnown RBP17.88■□□□□ 0.45
CTCF-201ENST00000264010 EDEM3Q9BZQ6 932 aa17.88■□□□□ 0.45
CTCF-201ENST00000264010 BHMT2Q9H2M3 363 aa17.88■□□□□ 0.45
CTCF-201ENST00000264010 SEMA6BQ9H3T3 888 aa17.88■□□□□ 0.45
CTCF-201ENST00000264010 FEZ2Q9UHY8 353 aaPredicted RBP17.88■□□□□ 0.45
CTCF-201ENST00000264010 PCDHA13Q9Y5I0 950 aa17.88■□□□□ 0.45
CTCF-201ENST00000264010 LONRF2Q1L5Z9 754 aa17.88■□□□□ 0.45
CTCF-201ENST00000264010 APTXQ7Z2E3 356 aaKnown RBP17.88■□□□□ 0.45
CTCF-201ENST00000264010 KIAA0895Q8NCT3 520 aa17.88■□□□□ 0.45
CTCF-201ENST00000264010 BCCIPQ9P287 314 aaKnown RBP eCLIP17.88■□□□□ 0.45
CTCF-201ENST00000264010 PCDHB13Q9Y5F0 798 aa17.88■□□□□ 0.45
CTCF-201ENST00000264010 BTAF1O14981 1849 aa17.88■□□□□ 0.45
CTCF-201ENST00000264010 WNK3Q9BYP7 1800 aa17.88■□□□□ 0.45
CTCF-201ENST00000264010 FAM83BQ5T0W9 1011 aa17.88■□□□□ 0.45
CTCF-201ENST00000264010 MMTAG2Q9BU76 263 aaKnown RBP17.88■□□□□ 0.45
CTCF-201ENST00000264010 EPC1Q9H2F5 836 aa17.88■□□□□ 0.45
CTCF-201ENST00000264010 KCNQ5Q9NR82 932 aa17.88■□□□□ 0.45
CTCF-201ENST00000264010 TSKSQ9UJT2 592 aa17.88■□□□□ 0.45
CTCF-201ENST00000264010 SCN7AQ01118 1682 aa17.87■□□□□ 0.45
CTCF-201ENST00000264010 A0A1W2PQJ5 194 aa17.87■□□□□ 0.45
CTCF-201ENST00000264010 GCKP35557 465 aa17.87■□□□□ 0.45
CTCF-201ENST00000264010 KRT26Q7Z3Y9 468 aa17.87■□□□□ 0.45
CTCF-201ENST00000264010 CPXCR1Q8N123 301 aa17.87■□□□□ 0.45
CTCF-201ENST00000264010 TEKT3Q9BXF9 490 aa17.87■□□□□ 0.45
CTCF-201ENST00000264010 H2AFXP16104 143 aaPredicted RBP17.87■□□□□ 0.45
CTCF-201ENST00000264010 MOXD1Q6UVY6 613 aa17.87■□□□□ 0.45
CTCF-201ENST00000264010 WDR11Q9BZH6 1224 aa17.87■□□□□ 0.45
CTCF-201ENST00000264010 ABCB11O95342 1321 aa17.87■□□□□ 0.45
CTCF-201ENST00000264010 IGKV6D-41A0A0C4DH26 115 aa17.87■□□□□ 0.45
CTCF-201ENST00000264010 TMCO5BA8MYB1 307 aa17.87■□□□□ 0.45
CTCF-201ENST00000264010 TCP1P17987 556 aaKnown RBP17.87■□□□□ 0.45
CTCF-201ENST00000264010 CC2D1AQ6P1N0 951 aaPredicted RBP17.87■□□□□ 0.45
CTCF-201ENST00000264010 MKL1Q969V6 931 aa17.87■□□□□ 0.45
CTCF-201ENST00000264010 HYOU1Q9Y4L1 999 aa17.87■□□□□ 0.45
CTCF-201ENST00000264010 BCORQ6W2J9 1755 aa17.86■□□□□ 0.45
CTCF-201ENST00000264010 DDX39AO00148 427 aaKnown RBP17.86■□□□□ 0.45
CTCF-201ENST00000264010 UBXN2AP68543 259 aa17.86■□□□□ 0.45
CTCF-201ENST00000264010 TMEM119Q4V9L6 283 aa17.86■□□□□ 0.45
CTCF-201ENST00000264010 FIGNQ5HY92 759 aa17.86■□□□□ 0.45
CTCF-201ENST00000264010 GMCL1Q96IK5 515 aa17.86■□□□□ 0.45
CTCF-201ENST00000264010 LRRC53A6NM62 1247 aa17.86■□□□□ 0.45
CTCF-201ENST00000264010 KLK7P49862 253 aa17.86■□□□□ 0.45
CTCF-201ENST00000264010 IRF2BP1Q8IU81 584 aa17.86■□□□□ 0.45
CTCF-201ENST00000264010 ANKRD13CQ8N6S4 541 aa17.86■□□□□ 0.45
CTCF-201ENST00000264010 LRRN4CLQ8ND94 238 aa17.86■□□□□ 0.45
CTCF-201ENST00000264010 LMBR1Q8WVP7 490 aa17.86■□□□□ 0.45
CTCF-201ENST00000264010 JPH2Q9BR39 696 aaPredicted RBP17.86■□□□□ 0.45
CTCF-201ENST00000264010 CCPG1Q9ULG6 757 aa17.86■□□□□ 0.45
CTCF-201ENST00000264010 PLS1Q14651 629 aa17.86■□□□□ 0.45
CTCF-201ENST00000264010 EXOC3L4Q17RC7 722 aa17.86■□□□□ 0.45
CTCF-201ENST00000264010 SFR1Q86XK3 245 aa17.86■□□□□ 0.45
CTCF-201ENST00000264010 FMNL3Q8IVF7 1028 aa17.86■□□□□ 0.45
CTCF-201ENST00000264010 NUDT12Q9BQG2 462 aa17.86■□□□□ 0.45
CTCF-201ENST00000264010 ZNF577Q9BSK1 485 aa17.86■□□□□ 0.45
CTCF-201ENST00000264010 CEP72Q9P209 647 aa17.86■□□□□ 0.45
CTCF-201ENST00000264010 PRR12Q9ULL5 1215 aa17.86■□□□□ 0.45
CTCF-201ENST00000264010 AFPP02771 609 aaKnown RBP17.85■□□□□ 0.45
CTCF-201ENST00000264010 EZRP15311 586 aaKnown RBP17.85■□□□□ 0.45
CTCF-201ENST00000264010 MIGA2Q7L4E1 593 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms