RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 SLC18A3Q16572 532 aa13.59□□□□□ -0.23
CHMP3-201ENST00000263856 GJB7Q6PEY0 223 aa13.59□□□□□ -0.23
CHMP3-201ENST00000263856 NEDD1Q8NHV4 660 aa13.59□□□□□ -0.23
CHMP3-201ENST00000263856 EMILIN3Q9NT22 766 aa13.59□□□□□ -0.23
CHMP3-201ENST00000263856 PLA2G4BP0C869 781 aa13.59□□□□□ -0.23
CHMP3-201ENST00000263856 AKR1B1P15121 316 aa13.59□□□□□ -0.23
CHMP3-201ENST00000263856 CAVIN3Q969G5 261 aa13.59□□□□□ -0.23
CHMP3-201ENST00000263856 CELF4Q9BZC1 486 aaKnown RBP13.59□□□□□ -0.23
CHMP3-201ENST00000263856 RIC8AQ9NPQ8 531 aa13.59□□□□□ -0.23
CHMP3-201ENST00000263856 AMACRQ9UHK6 382 aa13.59□□□□□ -0.23
CHMP3-201ENST00000263856 TSKSQ9UJT2 592 aa13.59□□□□□ -0.23
CHMP3-201ENST00000263856 BCS1LQ9Y276 419 aa13.59□□□□□ -0.23
CHMP3-201ENST00000263856 DLEC1Q9Y238 1755 aa13.59□□□□□ -0.23
CHMP3-201ENST00000263856 SSU72P8A0A1W2PR75 194 aa13.59□□□□□ -0.23
CHMP3-201ENST00000263856 FAM196BA6NMK8 535 aa13.59□□□□□ -0.23
CHMP3-201ENST00000263856 TAL1P17542 331 aaPredicted RBP13.59□□□□□ -0.23
CHMP3-201ENST00000263856 COPB2P35606 906 aa13.59□□□□□ -0.23
CHMP3-201ENST00000263856 SETQ01105 290 aaPredicted RBP13.59□□□□□ -0.23
CHMP3-201ENST00000263856 NAB2Q15742 525 aa13.59□□□□□ -0.23
CHMP3-201ENST00000263856 B4GALNT4Q76KP1 1039 aa13.59□□□□□ -0.23
CHMP3-201ENST00000263856 ZNF473Q8WTR7 871 aaKnown RBP13.59□□□□□ -0.23
CHMP3-201ENST00000263856 IQCDQ96DY2 449 aa13.59□□□□□ -0.23
CHMP3-201ENST00000263856 RTFDC1Q9BY42 306 aaPredicted RBP13.59□□□□□ -0.23
CHMP3-201ENST00000263856 RTCBQ9Y3I0 505 aaKnown RBP13.59□□□□□ -0.23
CHMP3-201ENST00000263856 PCDHB13Q9Y5F0 798 aa13.59□□□□□ -0.23
CHMP3-201ENST00000263856 SFI1A8K8P3 1242 aa13.58□□□□□ -0.24
CHMP3-201ENST00000263856 USP17L10C9JJH3 530 aa13.58□□□□□ -0.24
CHMP3-201ENST00000263856 GCOM1H8Y6P7 765 aaPredicted RBP13.58□□□□□ -0.24
CHMP3-201ENST00000263856 KRIT1O00522 736 aa13.58□□□□□ -0.24
CHMP3-201ENST00000263856 CETN3O15182 167 aa13.58□□□□□ -0.24
CHMP3-201ENST00000263856 PJA2O43164 708 aa13.58□□□□□ -0.24
CHMP3-201ENST00000263856 MYZAPP0CAP1 466 aa13.58□□□□□ -0.24
CHMP3-201ENST00000263856 ERVK-9P63128 1117 aa13.58□□□□□ -0.24
CHMP3-201ENST00000263856 ASTE1Q2TB18 679 aaPredicted RBP13.58□□□□□ -0.24
CHMP3-201ENST00000263856 RNF10Q8N5U6 811 aaKnown RBP13.58□□□□□ -0.24
CHMP3-201ENST00000263856 UHMK1Q8TAS1 419 aaKnown RBP13.58□□□□□ -0.24
CHMP3-201ENST00000263856 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.58□□□□□ -0.24
CHMP3-201ENST00000263856 HDAC9Q9UKV0 1011 aa13.58□□□□□ -0.24
CHMP3-201ENST00000263856 PPP1R37O75864 691 aa13.58□□□□□ -0.24
CHMP3-201ENST00000263856 ITGA4P13612 1032 aa13.58□□□□□ -0.24
CHMP3-201ENST00000263856 CASP5P51878 434 aa13.58□□□□□ -0.24
CHMP3-201ENST00000263856 IFFO1Q0D2I5 559 aa13.58□□□□□ -0.24
CHMP3-201ENST00000263856 PEX26Q7Z412 305 aa13.58□□□□□ -0.24
CHMP3-201ENST00000263856 DAAM2Q86T65 1068 aa13.58□□□□□ -0.24
CHMP3-201ENST00000263856 U2AF1L4Q8WU68 220 aaKnown RBP13.58□□□□□ -0.24
CHMP3-201ENST00000263856 ANKS1AQ92625 1134 aa13.58□□□□□ -0.24
CHMP3-201ENST00000263856 ATP6V1G3Q96LB4 118 aa13.58□□□□□ -0.24
CHMP3-201ENST00000263856 CCDC88AQ3V6T2 1871 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 TLDC2A0PJX2 215 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 DAPK3O43293 454 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 LCA5LO95447 670 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 FXR2P51116 673 aaKnown RBP eCLIP13.57□□□□□ -0.24
CHMP3-201ENST00000263856 MEI1Q5TIA1 1274 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 SLC30A10Q6XR72 485 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 C16orf86Q6ZW13 317 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 NLRP14Q86W24 1093 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 ADGRF4Q8IZF3 695 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 USP38Q8NB14 1042 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 DNAJC19Q96DA6 116 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 CCT8L2Q96SF2 557 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 BCAS3Q9H6U6 928 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 GDF3Q9NR23 364 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 GOLGA6L7A0A1B0GV03 622 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 ZNF571Q7Z3V5 609 aaPredicted RBP13.57□□□□□ -0.24
CHMP3-201ENST00000263856 AMIGO3Q86WK7 504 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 RPGRQ92834 1020 aaKnown RBP13.57□□□□□ -0.24
CHMP3-201ENST00000263856 CUL5Q93034 780 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 IKZF4Q9H2S9 585 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 PSTPIP2Q9H939 334 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 NOVA2Q9UNW9 492 aaKnown RBP13.57□□□□□ -0.24
CHMP3-201ENST00000263856 LAMB1P07942 1786 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 MYH4Q9Y623 1939 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 ABCA3Q99758 1704 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 FLT3P36888 993 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 HSD17B3P37058 310 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 SF3B2Q13435 895 aaKnown RBP13.57□□□□□ -0.24
CHMP3-201ENST00000263856 USH1GQ495M9 461 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 GLE1Q53GS7 698 aaKnown RBP13.57□□□□□ -0.24
CHMP3-201ENST00000263856 ALKBH5Q6P6C2 394 aaKnown RBP13.57□□□□□ -0.24
CHMP3-201ENST00000263856 TRMT1LQ7Z2T5 733 aaKnown RBP13.57□□□□□ -0.24
CHMP3-201ENST00000263856 IQCKQ8N0W5 287 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 SCFD1Q8WVM8 642 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 LRRC27Q9C0I9 530 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 EPN3Q9H201 632 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 FBXL5Q9UKA1 691 aa13.57□□□□□ -0.24
CHMP3-201ENST00000263856 NOC2LQ9Y3T9 749 aaKnown RBP13.57□□□□□ -0.24
CHMP3-201ENST00000263856 MEFVO15553 781 aaPredicted RBP13.56□□□□□ -0.24
CHMP3-201ENST00000263856 GFPT2O94808 682 aa13.56□□□□□ -0.24
CHMP3-201ENST00000263856 MDH1P40925 334 aaKnown RBP13.56□□□□□ -0.24
CHMP3-201ENST00000263856 SCNN1DP51172 638 aa13.56□□□□□ -0.24
CHMP3-201ENST00000263856 GTF2IP78347 998 aa13.56□□□□□ -0.24
CHMP3-201ENST00000263856 ITIH3Q06033 890 aa13.56□□□□□ -0.24
CHMP3-201ENST00000263856 LLGL1Q15334 1064 aa13.56□□□□□ -0.24
CHMP3-201ENST00000263856 CDC37Q16543 378 aaPredicted RBP13.56□□□□□ -0.24
CHMP3-201ENST00000263856 PTGISQ16647 500 aa13.56□□□□□ -0.24
CHMP3-201ENST00000263856 KRT71Q3SY84 523 aa13.56□□□□□ -0.24
CHMP3-201ENST00000263856 PRR16Q569H4 304 aa13.56□□□□□ -0.24
CHMP3-201ENST00000263856 MCTP2Q6DN12 878 aa13.56□□□□□ -0.24
CHMP3-201ENST00000263856 PIK3R5Q8WYR1 880 aa13.56□□□□□ -0.24
CHMP3-201ENST00000263856 HAS1Q92839 578 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms