RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 RANBP6O60518 1105 aaKnown RBP15.26■□□□□ 0.03
SGCA-201ENST00000262018 PLA2G6O60733 806 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 UPP2O95045 317 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 ZSCAN22P10073 491 aaPredicted RBP15.26■□□□□ 0.03
SGCA-201ENST00000262018 PDCP20941 246 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 CALML3P27482 149 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 AVPR2P30518 371 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 TFAP4Q01664 338 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 RRP12Q5JTH9 1297 aaKnown RBP15.26■□□□□ 0.03
SGCA-201ENST00000262018 TRAF7Q6Q0C0 670 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 SLC30A10Q6XR72 485 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 C7orf31Q8N865 590 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 NSUN7Q8NE18 718 aaKnown RBP15.26■□□□□ 0.03
SGCA-201ENST00000262018 NEDD1Q8NHV4 660 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 KAT2BQ92831 832 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 LY9Q9HBG7 655 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 GTF2IRD1Q9UHL9 959 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 RIF1Q5UIP0 2472 aaKnown RBP15.26■□□□□ 0.03
SGCA-201ENST00000262018 MICAL3Q7RTP6 2002 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 TBX10O75333 385 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 ARIH2O95376 493 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 CTDNEP1O95476 244 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 ICAM1P05362 532 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 MMP3P08254 477 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 GTF2F1P35269 517 aaKnown RBP eCLIP15.26■□□□□ 0.03
SGCA-201ENST00000262018 HMGN5P82970 282 aaKnown RBP15.26■□□□□ 0.03
SGCA-201ENST00000262018 PTK7Q13308 1070 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 TRIM71Q2Q1W2 868 aaKnown RBP15.26■□□□□ 0.03
SGCA-201ENST00000262018 PPP4R3BQ5MIZ7 849 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 RCSD1Q6JBY9 416 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 WNT8BQ93098 351 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 MPHOSPH6Q99547 160 aaKnown RBP15.26■□□□□ 0.03
SGCA-201ENST00000262018 ALG1Q9BT22 464 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 MTMR6Q9Y217 621 aa15.26■□□□□ 0.03
SGCA-201ENST00000262018 GOLGA8BA8MQT2 603 aa15.25■□□□□ 0.03
SGCA-201ENST00000262018 PROB1E7EW31 1015 aa15.25■□□□□ 0.03
SGCA-201ENST00000262018 GOLGA6L22H0YM25 854 aa15.25■□□□□ 0.03
SGCA-201ENST00000262018 IFIT3O14879 490 aaKnown RBP15.25■□□□□ 0.03
SGCA-201ENST00000262018 LINC01565O15544 149 aa15.25■□□□□ 0.03
SGCA-201ENST00000262018 JAK2O60674 1132 aa15.25■□□□□ 0.03
SGCA-201ENST00000262018 CSPG5O95196 566 aa15.25■□□□□ 0.03
SGCA-201ENST00000262018 CTNNB1P35222 781 aa15.25■□□□□ 0.03
SGCA-201ENST00000262018 ID4P47928 161 aa15.25■□□□□ 0.03
SGCA-201ENST00000262018 CCT2P78371 535 aaKnown RBP15.25■□□□□ 0.03
SGCA-201ENST00000262018 SIGLEC14Q08ET2 396 aa15.25■□□□□ 0.03
SGCA-201ENST00000262018 MKRN4PQ13434 485 aaPredicted RBP15.25■□□□□ 0.03
SGCA-201ENST00000262018 LARP1BQ659C4 914 aaKnown RBP15.25■□□□□ 0.03
SGCA-201ENST00000262018 TRPC6Q9Y210 931 aa15.25■□□□□ 0.03
SGCA-201ENST00000262018 MTMR7Q9Y216 660 aa15.25■□□□□ 0.03
SGCA-201ENST00000262018 C5orf42Q9H799 3197 aa15.24■□□□□ 0.03
SGCA-201ENST00000262018 NID2Q14112 1375 aa15.24■□□□□ 0.03
SGCA-201ENST00000262018 EMSYQ7Z589 1322 aa15.24■□□□□ 0.03
SGCA-201ENST00000262018 PSEN2P49810 448 aa15.24■□□□□ 0.03
SGCA-201ENST00000262018 SART3Q15020 963 aaKnown RBP15.24■□□□□ 0.03
SGCA-201ENST00000262018 FOXD4L5Q5VV16 416 aaPredicted RBP15.24■□□□□ 0.03
SGCA-201ENST00000262018 APOA5Q6Q788 366 aa15.24■□□□□ 0.03
SGCA-201ENST00000262018 RASGRP2Q7LDG7 609 aa15.24■□□□□ 0.03
SGCA-201ENST00000262018 TMTC2Q8N394 836 aa15.24■□□□□ 0.03
SGCA-201ENST00000262018 FOXD4L4Q8WXT5 416 aaPredicted RBP15.24■□□□□ 0.03
SGCA-201ENST00000262018 NCOA5Q9HCD5 579 aaKnown RBP15.24■□□□□ 0.03
SGCA-201ENST00000262018 NAP1L2Q9ULW6 460 aaPredicted RBP15.24■□□□□ 0.03
SGCA-201ENST00000262018 FAM186AA6NE01 2351 aa15.24■□□□□ 0.03
SGCA-201ENST00000262018 PLXNA3P51805 1871 aa15.23■□□□□ 0.03
SGCA-201ENST00000262018 PRR23AA6NEV1 266 aa15.23■□□□□ 0.03
SGCA-201ENST00000262018 LOC730098B7Z3J9 87 aa15.23■□□□□ 0.03
SGCA-201ENST00000262018 GRM6O15303 877 aa15.23■□□□□ 0.03
SGCA-201ENST00000262018 DHX16O60231 1041 aaKnown RBP15.23■□□□□ 0.03
SGCA-201ENST00000262018 DTNBO60941 627 aa15.23■□□□□ 0.03
SGCA-201ENST00000262018 F13A1P00488 732 aa15.23■□□□□ 0.03
SGCA-201ENST00000262018 GH1P01241 217 aa15.23■□□□□ 0.03
SGCA-201ENST00000262018 EDNRBP24530 442 aa15.23■□□□□ 0.03
SGCA-201ENST00000262018 NDUFV1P49821 464 aa15.23■□□□□ 0.03
SGCA-201ENST00000262018 ZNF200P98182 395 aaPredicted RBP15.23■□□□□ 0.03
SGCA-201ENST00000262018 WTAPQ15007 396 aa15.23■□□□□ 0.03
SGCA-201ENST00000262018 RNF207Q6ZRF8 634 aa15.23■□□□□ 0.03
SGCA-201ENST00000262018 IQCA1Q86XH1 822 aa15.23■□□□□ 0.03
SGCA-201ENST00000262018 TOP1MTQ969P6 601 aa15.23■□□□□ 0.03
SGCA-201ENST00000262018 LMAN2LQ9H0V9 348 aa15.23■□□□□ 0.03
SGCA-201ENST00000262018 SENP2Q9HC62 589 aa15.23■□□□□ 0.03
SGCA-201ENST00000262018 TCP11L1Q9NUJ3 509 aa15.23■□□□□ 0.03
SGCA-201ENST00000262018 KIF3AQ9Y496 699 aa15.23■□□□□ 0.03
SGCA-201ENST00000262018 COL4A6Q14031 1691 aa15.22■□□□□ 0.03
SGCA-201ENST00000262018 ERICH2A1L162 156 aa15.22■□□□□ 0.03
SGCA-201ENST00000262018 RSPH10B2B2RC85 870 aa15.22■□□□□ 0.03
SGCA-201ENST00000262018 RSPH10BP0C881 870 aa15.22■□□□□ 0.03
SGCA-201ENST00000262018 RCAN1P53805 252 aa15.22■□□□□ 0.03
SGCA-201ENST00000262018 ARHGAP1Q07960 439 aa15.22■□□□□ 0.03
SGCA-201ENST00000262018 ADAM15Q13444 863 aa15.22■□□□□ 0.03
SGCA-201ENST00000262018 SEC23AQ15436 765 aa15.22■□□□□ 0.03
SGCA-201ENST00000262018 CCDC96Q2M329 555 aa15.22■□□□□ 0.03
SGCA-201ENST00000262018 PLEKHG4Q58EX7 1191 aa15.22■□□□□ 0.03
SGCA-201ENST00000262018 CCDC178Q5BJE1 867 aa15.22■□□□□ 0.03
SGCA-201ENST00000262018 CCDC62Q6P9F0 684 aa15.22■□□□□ 0.03
SGCA-201ENST00000262018 FIBCD1Q8N539 461 aa15.22■□□□□ 0.03
SGCA-201ENST00000262018 C11orf84Q9BUA3 381 aaPredicted RBP15.22■□□□□ 0.03
SGCA-201ENST00000262018 IFIH1Q9BYX4 1025 aaKnown RBP15.22■□□□□ 0.03
SGCA-201ENST00000262018 RANBP17Q9H2T7 1088 aaKnown RBP15.22■□□□□ 0.03
SGCA-201ENST00000262018 IL17RBQ9NRM6 502 aa15.22■□□□□ 0.03
SGCA-201ENST00000262018 STX8Q9UNK0 236 aa15.22■□□□□ 0.03
SGCA-201ENST00000262018 CCDC69A6NI79 296 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms