RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 TTBK2Q6IQ55 1244 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 AENQ8WTP8 325 aaKnown RBP15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 SPZ1Q9BXG8 430 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 FGFBP2Q9BYJ0 223 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 FAM153BP0C7A2 387 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 FAM153CQ494X1 144 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 CFAP221Q4G0U5 840 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 TCERG1LQ5VWI1 586 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 HAUS3Q68CZ6 603 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 MAATS1Q7Z4T9 603 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 PURBQ96QR8 312 aaKnown RBP15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 PACSIN1Q9BY11 444 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 PANK4Q9NVE7 773 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 FAM153AQ9UHL3 310 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 KIAA1024Q9UPX6 916 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 A0A1W2PQJ5 194 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 OPA1O60313 960 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 IL1R1P14778 569 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 KLRC1P26715 233 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 MAGEA9P43362 315 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 ECM1Q16610 540 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 FAM26FQ5R3K3 315 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 CFAP58Q5T655 872 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 SAMD1Q6SPF0 538 aaPredicted RBP15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 PACS2Q86VP3 889 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 GUF1Q8N442 669 aaKnown RBP15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 MMGT1Q8N4V1 131 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 VEZTQ9HBM0 779 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 DAGLAQ9Y4D2 1042 aa15.94■□□□□ 0.14
SFSWAP-201ENST00000261674 ANKRD31Q8N7Z5 1873 aa15.93■□□□□ 0.14
SFSWAP-201ENST00000261674 KLHL30Q0D2K2 578 aa15.93■□□□□ 0.14
SFSWAP-201ENST00000261674 KLHDC7AQ5VTJ3 777 aa15.93■□□□□ 0.14
SFSWAP-201ENST00000261674 PDXDC1Q6P996 788 aa15.93■□□□□ 0.14
SFSWAP-201ENST00000261674 RAD54LQ92698 747 aa15.93■□□□□ 0.14
SFSWAP-201ENST00000261674 PCDHA12Q9UN75 941 aa15.93■□□□□ 0.14
SFSWAP-201ENST00000261674 COL24A1Q17RW2 1714 aa15.93■□□□□ 0.14
SFSWAP-201ENST00000261674 NDUFAB1O14561 156 aa15.93■□□□□ 0.14
SFSWAP-201ENST00000261674 LRP5O75197 1615 aa15.93■□□□□ 0.14
SFSWAP-201ENST00000261674 HPDP32754 393 aaPredicted RBP15.93■□□□□ 0.14
SFSWAP-201ENST00000261674 PPP1R2P41236 205 aa15.93■□□□□ 0.14
SFSWAP-201ENST00000261674 EPHB4P54760 987 aa15.93■□□□□ 0.14
SFSWAP-201ENST00000261674 KCNMA1Q12791 1236 aa15.93■□□□□ 0.14
SFSWAP-201ENST00000261674 KCTD1Q719H9 257 aa15.93■□□□□ 0.14
SFSWAP-201ENST00000261674 NEDD1Q8NHV4 660 aa15.93■□□□□ 0.14
SFSWAP-201ENST00000261674 ANKS1AQ92625 1134 aa15.93■□□□□ 0.14
SFSWAP-201ENST00000261674 SPON1Q9HCB6 807 aa15.93■□□□□ 0.14
SFSWAP-201ENST00000261674 COL4A3BPQ9Y5P4 624 aa15.93■□□□□ 0.14
SFSWAP-201ENST00000261674 TMCO5BA8MYB1 307 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 TCP10L2B9ZVM9 353 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 FKBP3Q00688 224 aaKnown RBP15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 PPFIA1Q13136 1202 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 SHROOM1Q2M3G4 852 aaPredicted RBP15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 FIGNQ5HY92 759 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 BAP1Q92560 729 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 ZIM3Q96PE6 472 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 BCCIPQ9P287 314 aaKnown RBP eCLIP15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 ACTN1P12814 892 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 CORO7P57737 925 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 COASYQ13057 564 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 PRAMEF18Q5VWM3 479 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 DDX25Q9UHL0 483 aaKnown RBP15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 A0A087X0T9 212 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 USP17L15C9J2P7 530 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 USP17L13C9JLJ4 530 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 USP17L11C9JVI0 530 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 USP17L18D6R9N7 530 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 USP17L22D6RA61 530 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 USP17L17D6RBQ6 530 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 USP17L19D6RCP7 530 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 USP17L20D6RJB6 530 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 KCNK3O14649 394 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 FAM228BP0C875 321 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 USP17L24Q0WX57 530 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 NNTQ13423 1086 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 USP17L6PQ6QN14 398 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 SPAG5Q96R06 1193 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 DDX4Q9NQI0 724 aaKnown RBP15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 STK17AQ9UEE5 414 aa15.92■□□□□ 0.14
SFSWAP-201ENST00000261674 PVALEFA0A1B0GWK0 134 aa15.91■□□□□ 0.14
SFSWAP-201ENST00000261674 MEIS1O00470 390 aa15.91■□□□□ 0.14
SFSWAP-201ENST00000261674 EGFRP00533 1210 aa15.91■□□□□ 0.14
SFSWAP-201ENST00000261674 PDHBP11177 359 aa15.91■□□□□ 0.14
SFSWAP-201ENST00000261674 STAT3P40763 770 aa15.91■□□□□ 0.14
SFSWAP-201ENST00000261674 CDK17Q00537 523 aa15.91■□□□□ 0.14
SFSWAP-201ENST00000261674 TAF4BQ92750 862 aa15.91■□□□□ 0.14
SFSWAP-201ENST00000261674 POTEB3A0JP26 581 aa15.91■□□□□ 0.14
SFSWAP-201ENST00000261674 POTECB2RU33 542 aa15.91■□□□□ 0.14
SFSWAP-201ENST00000261674 RPS6KA5O75582 802 aa15.91■□□□□ 0.14
SFSWAP-201ENST00000261674 LRRC63Q05C16 580 aa15.91■□□□□ 0.14
SFSWAP-201ENST00000261674 ADAM9Q13443 819 aa15.91■□□□□ 0.14
SFSWAP-201ENST00000261674 POTEBQ6S5H4 581 aa15.91■□□□□ 0.14
SFSWAP-201ENST00000261674 DLK2Q6UY11 383 aa15.91■□□□□ 0.14
SFSWAP-201ENST00000261674 ZNF662Q6ZS27 426 aa15.91■□□□□ 0.14
SFSWAP-201ENST00000261674 LRRC55Q6ZSA7 311 aa15.91■□□□□ 0.14
SFSWAP-201ENST00000261674 GPBP1Q86WP2 473 aa15.91■□□□□ 0.14
SFSWAP-201ENST00000261674 IFT20Q8IY31 132 aa15.91■□□□□ 0.14
SFSWAP-201ENST00000261674 PPM1EQ8WY54 764 aa15.91■□□□□ 0.14
SFSWAP-201ENST00000261674 JDP2Q8WYK2 163 aa15.91■□□□□ 0.14
SFSWAP-201ENST00000261674 MTMR9Q96QG7 549 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms