RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 RAB21Q9UL25 225 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 JCADQ9P266 1359 aa11.04□□□□□ -0.64
PALB2-201ENST00000261584 ZNF804BA4D1E1 1349 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 GOLGA8IPA6NC78 632 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 GOLGA8JA6NMD2 632 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 UPP2O95045 317 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 GUCY2CP25092 1073 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 ZBTB16Q05516 673 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 ZNF449Q6P9G9 518 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 C8orf37Q96NL8 207 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 SEMA6BQ9H3T3 888 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 CXorf56Q9H5V9 222 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 DBR1Q9UK59 544 aaKnown RBP11.03□□□□□ -0.64
PALB2-201ENST00000261584 DNM3Q9UQ16 869 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 PCDHA1Q9Y5I3 950 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 TCRBV5S4A2TA0A5A2 114 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 TULP2O00295 520 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 GDF11O95390 407 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 ZNF131P52739 623 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 CTTNQ14247 550 aaKnown RBP11.03□□□□□ -0.64
PALB2-201ENST00000261584 EMBQ6PCB8 327 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 KIAA0825Q8IV33 1275 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 PPM1KQ8N3J5 372 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 PRPF38AQ8NAV1 312 aaKnown RBP11.03□□□□□ -0.64
PALB2-201ENST00000261584 RSRC1Q96IZ7 334 aaKnown RBP11.03□□□□□ -0.64
PALB2-201ENST00000261584 TAOK3Q9H2K8 898 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 VEZTQ9HBM0 779 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 MEFVO15553 781 aaPredicted RBP11.03□□□□□ -0.64
PALB2-201ENST00000261584 ATMINO43313 823 aaPredicted RBP11.03□□□□□ -0.64
PALB2-201ENST00000261584 SCP2P22307 547 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 PPP2R5BQ15173 497 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 C2CD6Q53TS8 623 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 TTMPQ5BVD1 217 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 BICD1Q96G01 975 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 MXD3Q9BW11 206 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 HEMGNQ9BXL5 484 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 IKZF4Q9H2S9 585 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 KLC4Q9NSK0 619 aa11.03□□□□□ -0.64
PALB2-201ENST00000261584 SCAF8Q9UPN6 1271 aaKnown RBP11.03□□□□□ -0.64
PALB2-201ENST00000261584 CCDC169A6NNP5 214 aa11.02□□□□□ -0.64
PALB2-201ENST00000261584 POC1B-GALNT4F8VUJ3 575 aa11.02□□□□□ -0.64
PALB2-201ENST00000261584 PGRMC1O00264 195 aaKnown RBP11.02□□□□□ -0.64
PALB2-201ENST00000261584 HAUS3Q68CZ6 603 aa11.02□□□□□ -0.64
PALB2-201ENST00000261584 TTI2Q6NXR4 508 aa11.02□□□□□ -0.64
PALB2-201ENST00000261584 IRF2BP1Q8IU81 584 aa11.02□□□□□ -0.64
PALB2-201ENST00000261584 LMBR1Q8WVP7 490 aa11.02□□□□□ -0.64
PALB2-201ENST00000261584 AZI2Q9H6S1 392 aa11.02□□□□□ -0.64
PALB2-201ENST00000261584 SLC37A4O43826 429 aa11.02□□□□□ -0.65
PALB2-201ENST00000261584 MMEP08473 750 aa11.02□□□□□ -0.65
PALB2-201ENST00000261584 PLA2G4BP0C869 781 aa11.02□□□□□ -0.65
PALB2-201ENST00000261584 TNIP1Q15025 636 aa11.02□□□□□ -0.65
PALB2-201ENST00000261584 NUGGCQ68CJ6 796 aa11.02□□□□□ -0.65
PALB2-201ENST00000261584 KAT2BQ92831 832 aa11.02□□□□□ -0.65
PALB2-201ENST00000261584 MTRF1LQ9UGC7 380 aaKnown RBP11.02□□□□□ -0.65
PALB2-201ENST00000261584 OPLAHO14841 1288 aa11.02□□□□□ -0.65
PALB2-201ENST00000261584 SEMA3EO15041 775 aa11.02□□□□□ -0.65
PALB2-201ENST00000261584 PLCG2P16885 1265 aa11.02□□□□□ -0.65
PALB2-201ENST00000261584 CDK8P49336 464 aa11.02□□□□□ -0.65
PALB2-201ENST00000261584 ERMNQ8TAM6 284 aa11.02□□□□□ -0.65
PALB2-201ENST00000261584 ARHGEF2Q92974 986 aaKnown RBP11.02□□□□□ -0.65
PALB2-201ENST00000261584 CUL5Q93034 780 aa11.02□□□□□ -0.65
PALB2-201ENST00000261584 ATP6V1G3Q96LB4 118 aa11.02□□□□□ -0.65
PALB2-201ENST00000261584 DUSP9Q99956 384 aaKnown RBP11.02□□□□□ -0.65
PALB2-201ENST00000261584 SALL4Q9UJQ4 1053 aa11.02□□□□□ -0.65
PALB2-201ENST00000261584 DAAM1Q9Y4D1 1078 aa11.02□□□□□ -0.65
PALB2-201ENST00000261584 USP17L10C9JJH3 530 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 TRAPPC10P48553 1259 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 COASYQ13057 564 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 SEC23AQ15436 765 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 SYCP2LQ5T4T6 812 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 ZNF804AQ7Z570 1209 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 SFR1Q86XK3 245 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 TTC16Q8NEE8 873 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 FMO2Q99518 471 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 PSD3Q9NYI0 1048 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 NOC2LQ9Y3T9 749 aaKnown RBP11.01□□□□□ -0.65
PALB2-201ENST00000261584 NCAPD2Q15021 1401 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 A0A1B0GUA9 196 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 GMNCA6NCL1 334 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 ZNF263O14978 683 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 DLATP10515 647 aaKnown RBP11.01□□□□□ -0.65
PALB2-201ENST00000261584 ALX1Q15699 326 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 PARP10Q53GL7 1025 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 CREG2Q8IUH2 290 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 GIMAP8Q8ND71 665 aaPredicted RBP11.01□□□□□ -0.65
PALB2-201ENST00000261584 HAUS1Q96CS2 278 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 HVCN1Q96D96 273 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 RGL1Q9NZL6 768 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 RASAL2Q9UJF2 1139 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 RFX7Q2KHR2 1363 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 GOLGB1Q14789 3259 aaKnown RBP11.01□□□□□ -0.65
PALB2-201ENST00000261584 ENO4A6NNW6 628 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 KRT15P19012 456 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 STX2P32856 288 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 MDH1P40925 334 aaKnown RBP11.01□□□□□ -0.65
PALB2-201ENST00000261584 TMED8Q6PL24 325 aaPredicted RBP11.01□□□□□ -0.65
PALB2-201ENST00000261584 CCDC197Q8NCU1 140 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 NSUN4Q96CB9 384 aaKnown RBP11.01□□□□□ -0.65
PALB2-201ENST00000261584 NCAPGQ9BPX3 1015 aa11.01□□□□□ -0.65
PALB2-201ENST00000261584 PREX1Q8TCU6 1659 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms