RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 EMID1Q96A84 441 aaPredicted RBP17.78■□□□□ 0.44
CCDC90B-201ENST00000260054 AK8Q96MA6 479 aa17.78■□□□□ 0.44
CCDC90B-201ENST00000260054 SPATA33Q96N06 139 aa17.78■□□□□ 0.44
CCDC90B-201ENST00000260054 MMTAG2Q9BU76 263 aaKnown RBP17.78■□□□□ 0.44
CCDC90B-201ENST00000260054 LMBRD1Q9NUN5 540 aa17.78■□□□□ 0.44
CCDC90B-201ENST00000260054 TCEAL9Q9UHQ7 104 aa17.78■□□□□ 0.44
CCDC90B-201ENST00000260054 GOLGA6L22H0YM25 854 aa17.77■□□□□ 0.44
CCDC90B-201ENST00000260054 LAMC2Q13753 1193 aa17.77■□□□□ 0.44
CCDC90B-201ENST00000260054 PKN2Q16513 984 aaKnown RBP17.77■□□□□ 0.44
CCDC90B-201ENST00000260054 RESP18Q5W5W9 173 aa17.77■□□□□ 0.44
CCDC90B-201ENST00000260054 MIER3Q7Z3K6 550 aa17.77■□□□□ 0.44
CCDC90B-201ENST00000260054 OR6J1Q8NGC5 347 aa17.77■□□□□ 0.44
CCDC90B-201ENST00000260054 GPR20Q99678 358 aa17.77■□□□□ 0.44
CCDC90B-201ENST00000260054 PRDM10Q9NQV6 1147 aa17.77■□□□□ 0.44
CCDC90B-201ENST00000260054 DISC1Q9NRI5 854 aa17.77■□□□□ 0.44
CCDC90B-201ENST00000260054 SAMM50Q9Y512 469 aa17.77■□□□□ 0.44
CCDC90B-201ENST00000260054 A0A1W2PQ27 194 aa17.77■□□□□ 0.43
CCDC90B-201ENST00000260054 A0A1W2PQ64 194 aa17.77■□□□□ 0.43
CCDC90B-201ENST00000260054 A0A1W2PQD8 194 aa17.77■□□□□ 0.43
CCDC90B-201ENST00000260054 GSTTP1A0A1W2PQM5 241 aa17.77■□□□□ 0.43
CCDC90B-201ENST00000260054 WDR64B1ANS9 1081 aa17.77■□□□□ 0.43
CCDC90B-201ENST00000260054 DYNC1LI2O43237 492 aaPredicted RBP17.77■□□□□ 0.43
CCDC90B-201ENST00000260054 DUSP11O75319 330 aaKnown RBP17.77■□□□□ 0.43
CCDC90B-201ENST00000260054 ATG7O95352 703 aa17.77■□□□□ 0.43
CCDC90B-201ENST00000260054 SFNP31947 248 aa17.77■□□□□ 0.43
CCDC90B-201ENST00000260054 JAK3P52333 1124 aa17.77■□□□□ 0.43
CCDC90B-201ENST00000260054 SMAP1Q8IYB5 467 aaPredicted RBP17.77■□□□□ 0.43
CCDC90B-201ENST00000260054 HMX1Q9NP08 348 aaPredicted RBP17.77■□□□□ 0.43
CCDC90B-201ENST00000260054 GOLGA6L4A6NEF3 574 aa17.76■□□□□ 0.43
CCDC90B-201ENST00000260054 CMA1P23946 247 aa17.76■□□□□ 0.43
CCDC90B-201ENST00000260054 IRX5P78411 483 aaPredicted RBP17.76■□□□□ 0.43
CCDC90B-201ENST00000260054 EPHA7Q15375 998 aa17.76■□□□□ 0.43
CCDC90B-201ENST00000260054 ABHD15Q6UXT9 468 aa17.76■□□□□ 0.43
CCDC90B-201ENST00000260054 PPTC7Q8NI37 304 aa17.76■□□□□ 0.43
CCDC90B-201ENST00000260054 SNX29Q8TEQ0 813 aa17.76■□□□□ 0.43
CCDC90B-201ENST00000260054 AFG1LQ8WV93 481 aa17.76■□□□□ 0.43
CCDC90B-201ENST00000260054 EIF2AK1Q9BQI3 630 aaKnown RBP17.76■□□□□ 0.43
CCDC90B-201ENST00000260054 GOLPH3LQ9H4A5 285 aa17.76■□□□□ 0.43
CCDC90B-201ENST00000260054 DDX20Q9UHI6 824 aaKnown RBP17.76■□□□□ 0.43
CCDC90B-201ENST00000260054 Q9Y3F1 56 aa17.76■□□□□ 0.43
CCDC90B-201ENST00000260054 PCDHA10Q9Y5I2 948 aa17.76■□□□□ 0.43
CCDC90B-201ENST00000260054 BRCA2P51587 3418 aa17.76■□□□□ 0.43
CCDC90B-201ENST00000260054 A0A1B0GVL5 298 aa17.75■□□□□ 0.43
CCDC90B-201ENST00000260054 NOP56O00567 594 aaKnown RBP17.75■□□□□ 0.43
CCDC90B-201ENST00000260054 RARBP10826 455 aa17.75■□□□□ 0.43
CCDC90B-201ENST00000260054 UBA7P41226 1012 aa17.75■□□□□ 0.43
CCDC90B-201ENST00000260054 UBE2HP62256 183 aa17.75■□□□□ 0.43
CCDC90B-201ENST00000260054 KRT79Q5XKE5 535 aa17.75■□□□□ 0.43
CCDC90B-201ENST00000260054 CABP7Q86V35 215 aa17.75■□□□□ 0.43
CCDC90B-201ENST00000260054 RDM1Q8NG50 284 aa17.75■□□□□ 0.43
CCDC90B-201ENST00000260054 SEPT1Q8WYJ6 367 aa17.75■□□□□ 0.43
CCDC90B-201ENST00000260054 HSD17B14Q9BPX1 270 aa17.75■□□□□ 0.43
CCDC90B-201ENST00000260054 CCSER1Q9C0I3 900 aa17.75■□□□□ 0.43
CCDC90B-201ENST00000260054 UNC93B1Q9H1C4 597 aa17.75■□□□□ 0.43
CCDC90B-201ENST00000260054 RGL1Q9NZL6 768 aa17.75■□□□□ 0.43
CCDC90B-201ENST00000260054 MED24O75448 989 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 SUPT20HL2P0C7V6 817 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 SPATA31C1P0DKV0 1188 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 PFKFB1P16118 471 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 TCF7P36402 384 aaPredicted RBP17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 CYP4A11Q02928 519 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 KARSQ15046 597 aaKnown RBP17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 MTFR1Q15390 333 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 ECM1Q16610 540 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 HAUS3Q68CZ6 603 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 MIS18BP1Q6P0N0 1132 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 CATSPER3Q86XQ3 398 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 CCDC60Q8IWA6 550 aaPredicted RBP17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 FSIP1Q8NA03 581 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 BANK1Q8NDB2 785 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 ERMNQ8TAM6 284 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 MRPS27Q92552 414 aaKnown RBP17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 DYDC2Q96IM9 177 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 PCYT2Q99447 389 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 HPSEQ9Y251 543 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 SYNRGQ9UMZ2 1314 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 A0A087X0B3 334 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 IGKV6D-21A0A0A0MT36 114 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 A6NJR5 290 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 CTAGE5O15320 804 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 SLITRK3O94933 977 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 PGK1P00558 417 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 MYCP01106 439 aaPredicted RBP17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 PSAPP07602 524 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 MMP3P08254 477 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 RPA1P27694 616 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 CCT6AP40227 531 aaKnown RBP17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 UGCGQ16739 394 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 SWSAP1Q6NVH7 229 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 POLR3CQ9BUI4 534 aaPredicted RBP17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 AP5M1Q9H0R1 490 aa17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 UPF3AQ9H1J1 476 aaKnown RBP17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 WRAP73Q9P2S5 460 aaPredicted RBP17.74■□□□□ 0.43
CCDC90B-201ENST00000260054 FAM237AA0A1B0GTK4 181 aa17.73■□□□□ 0.43
CCDC90B-201ENST00000260054 POTEB3A0JP26 581 aa17.73■□□□□ 0.43
CCDC90B-201ENST00000260054 MYADML2A6NDP7 307 aa17.73■□□□□ 0.43
CCDC90B-201ENST00000260054 HOXD8P13378 290 aaPredicted RBP17.73■□□□□ 0.43
CCDC90B-201ENST00000260054 NDUFA8P51970 172 aa17.73■□□□□ 0.43
CCDC90B-201ENST00000260054 GJA9P57773 515 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms