RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 TSGA10IPQ3SY00 556 aa21.8■■□□□ 1.08
TM6SF1-201ENST00000258909 TJAP1Q5JTD0 557 aa21.8■■□□□ 1.08
TM6SF1-201ENST00000258909 GIMAP8Q8ND71 665 aaPredicted RBP21.8■■□□□ 1.08
TM6SF1-201ENST00000258909 GOLGA8AA7E2F4 631 aa21.79■■□□□ 1.08
TM6SF1-201ENST00000258909 GOLGA8BA8MQT2 603 aa21.79■■□□□ 1.08
TM6SF1-201ENST00000258909 LMBR1Q8WVP7 490 aa21.79■■□□□ 1.08
TM6SF1-201ENST00000258909 MTCH2Q9Y6C9 303 aa21.79■■□□□ 1.08
TM6SF1-201ENST00000258909 MICAL3Q7RTP6 2002 aa21.79■■□□□ 1.08
TM6SF1-201ENST00000258909 EMSYQ7Z589 1322 aa21.78■■□□□ 1.08
TM6SF1-201ENST00000258909 GSTTP1A0A1W2PQM5 241 aa21.78■■□□□ 1.08
TM6SF1-201ENST00000258909 GJB5O95377 273 aa21.78■■□□□ 1.08
TM6SF1-201ENST00000258909 GNAT1P11488 350 aa21.78■■□□□ 1.08
TM6SF1-201ENST00000258909 MARK3P27448 753 aa21.78■■□□□ 1.08
TM6SF1-201ENST00000258909 CDC27P30260 824 aa21.78■■□□□ 1.08
TM6SF1-201ENST00000258909 KRT32Q14532 448 aa21.78■■□□□ 1.08
TM6SF1-201ENST00000258909 CDHR1Q96JP9 859 aa21.78■■□□□ 1.08
TM6SF1-201ENST00000258909 JADE2Q9NQC1 790 aa21.78■■□□□ 1.08
TM6SF1-201ENST00000258909 FAM217BQ9NTX9 383 aaPredicted RBP21.78■■□□□ 1.08
TM6SF1-201ENST00000258909 MTUS1Q9ULD2 1270 aa21.78■■□□□ 1.08
TM6SF1-201ENST00000258909 MUC3AQ02505 3323 aa21.78■■□□□ 1.08
TM6SF1-201ENST00000258909 CYP2W1Q8TAV3 490 aa21.77■■□□□ 1.08
TM6SF1-201ENST00000258909 ATXN2LQ8WWM7 1075 aaKnown RBP21.77■■□□□ 1.08
TM6SF1-201ENST00000258909 SEPT1Q8WYJ6 367 aa21.77■■□□□ 1.08
TM6SF1-201ENST00000258909 SYMPKQ92797 1274 aaKnown RBP21.77■■□□□ 1.08
TM6SF1-201ENST00000258909 CCDC136Q96JN2 1154 aa21.77■■□□□ 1.08
TM6SF1-201ENST00000258909 RIC8AQ9NPQ8 531 aa21.77■■□□□ 1.08
TM6SF1-201ENST00000258909 GTPBP6O43824 516 aaPredicted RBP21.77■■□□□ 1.07
TM6SF1-201ENST00000258909 EFCAB14O75071 495 aa21.77■■□□□ 1.07
TM6SF1-201ENST00000258909 ADAM17P78536 824 aa21.77■■□□□ 1.07
TM6SF1-201ENST00000258909 FGD1P98174 961 aa21.77■■□□□ 1.07
TM6SF1-201ENST00000258909 GRB10Q13322 594 aa21.77■■□□□ 1.07
TM6SF1-201ENST00000258909 SKIV2LQ15477 1246 aaKnown RBP21.77■■□□□ 1.07
TM6SF1-201ENST00000258909 PLEKHG4Q58EX7 1191 aa21.77■■□□□ 1.07
TM6SF1-201ENST00000258909 ASB2Q96Q27 587 aa21.77■■□□□ 1.07
TM6SF1-201ENST00000258909 RAD9AQ99638 391 aa21.77■■□□□ 1.07
TM6SF1-201ENST00000258909 TMEM260Q9NX78 707 aa21.77■■□□□ 1.07
TM6SF1-201ENST00000258909 SMCO2A6NFE2 343 aa21.76■■□□□ 1.07
TM6SF1-201ENST00000258909 STXBP3O00186 592 aa21.76■■□□□ 1.07
TM6SF1-201ENST00000258909 ADD1P35611 737 aaKnown RBP21.76■■□□□ 1.07
TM6SF1-201ENST00000258909 ADCY7P51828 1080 aa21.76■■□□□ 1.07
TM6SF1-201ENST00000258909 APOBRQ0VD83 1088 aa21.76■■□□□ 1.07
TM6SF1-201ENST00000258909 RUFY4Q6ZNE9 571 aa21.76■■□□□ 1.07
TM6SF1-201ENST00000258909 MYOCDQ8IZQ8 938 aa21.76■■□□□ 1.07
TM6SF1-201ENST00000258909 GLG1Q92896 1179 aa21.76■■□□□ 1.07
TM6SF1-201ENST00000258909 JAKMIP1Q96N16 626 aaKnown RBP21.76■■□□□ 1.07
TM6SF1-201ENST00000258909 MXRA8Q9BRK3 442 aa21.76■■□□□ 1.07
TM6SF1-201ENST00000258909 EHMT1Q9H9B1 1298 aa21.76■■□□□ 1.07
TM6SF1-201ENST00000258909 COL4A4P53420 1690 aaPredicted RBP21.75■■□□□ 1.07
TM6SF1-201ENST00000258909 NRCAMQ92823 1304 aa21.75■■□□□ 1.07
TM6SF1-201ENST00000258909 MKRN4PQ13434 485 aaPredicted RBP21.75■■□□□ 1.07
TM6SF1-201ENST00000258909 Q6ZUG5 572 aa21.75■■□□□ 1.07
TM6SF1-201ENST00000258909 ANO3Q9BYT9 981 aa21.75■■□□□ 1.07
TM6SF1-201ENST00000258909 KCNH7Q9NS40 1196 aa21.75■■□□□ 1.07
TM6SF1-201ENST00000258909 SNX14Q9Y5W7 946 aa21.75■■□□□ 1.07
TM6SF1-201ENST00000258909 LPXNO60711 386 aa21.74■■□□□ 1.07
TM6SF1-201ENST00000258909 AMHP03971 560 aa21.74■■□□□ 1.07
TM6SF1-201ENST00000258909 HMGB1P09429 215 aaKnown RBP21.74■■□□□ 1.07
TM6SF1-201ENST00000258909 ARP10275 920 aa21.74■■□□□ 1.07
TM6SF1-201ENST00000258909 POU3F3P20264 500 aaPredicted RBP21.74■■□□□ 1.07
TM6SF1-201ENST00000258909 MRPS5P82675 430 aaKnown RBP21.74■■□□□ 1.07
TM6SF1-201ENST00000258909 TFF2Q03403 129 aa21.74■■□□□ 1.07
TM6SF1-201ENST00000258909 PPFIA1Q13136 1202 aa21.74■■□□□ 1.07
TM6SF1-201ENST00000258909 PPP1R18Q6NYC8 613 aa21.74■■□□□ 1.07
TM6SF1-201ENST00000258909 GDPD5Q8WTR4 605 aa21.74■■□□□ 1.07
TM6SF1-201ENST00000258909 SEPT8Q92599 483 aa21.74■■□□□ 1.07
TM6SF1-201ENST00000258909 ZBTB10Q96DT7 871 aa21.74■■□□□ 1.07
TM6SF1-201ENST00000258909 TSPYL2Q9H2G4 693 aaPredicted RBP21.74■■□□□ 1.07
TM6SF1-201ENST00000258909 JPH1Q9HDC5 661 aaPredicted RBP21.74■■□□□ 1.07
TM6SF1-201ENST00000258909 BARHL2Q9NY43 387 aa21.74■■□□□ 1.07
TM6SF1-201ENST00000258909 ERAP1Q9NZ08 941 aa21.74■■□□□ 1.07
TM6SF1-201ENST00000258909 LINC01553A4QN01 128 aa21.73■■□□□ 1.07
TM6SF1-201ENST00000258909 MAFGO15525 162 aa21.73■■□□□ 1.07
TM6SF1-201ENST00000258909 CAND2O75155 1236 aa21.73■■□□□ 1.07
TM6SF1-201ENST00000258909 METAP2P50579 478 aaKnown RBP eCLIP21.73■■□□□ 1.07
TM6SF1-201ENST00000258909 IGBP1P78318 339 aa21.73■■□□□ 1.07
TM6SF1-201ENST00000258909 GRIK4Q16099 956 aa21.73■■□□□ 1.07
TM6SF1-201ENST00000258909 KCNB2Q92953 911 aa21.73■■□□□ 1.07
TM6SF1-201ENST00000258909 BRF1Q92994 677 aa21.73■■□□□ 1.07
TM6SF1-201ENST00000258909 PCYT2Q99447 389 aa21.73■■□□□ 1.07
TM6SF1-201ENST00000258909 SMARCAD1Q9H4L7 1026 aa21.73■■□□□ 1.07
TM6SF1-201ENST00000258909 TCF20Q9UGU0 1960 aaKnown RBP21.73■■□□□ 1.07
TM6SF1-201ENST00000258909 UPP2O95045 317 aa21.72■■□□□ 1.07
TM6SF1-201ENST00000258909 CHRNA1P02708 482 aa21.72■■□□□ 1.07
TM6SF1-201ENST00000258909 HSPA4P34932 840 aa21.72■■□□□ 1.07
TM6SF1-201ENST00000258909 SLC9A2Q9UBY0 812 aa21.72■■□□□ 1.07
TM6SF1-201ENST00000258909 NCOR1O75376 2440 aa21.72■■□□□ 1.07
TM6SF1-201ENST00000258909 ADAMTS3O15072 1205 aa21.71■■□□□ 1.07
TM6SF1-201ENST00000258909 PPFIA3O75145 1194 aa21.71■■□□□ 1.07
TM6SF1-201ENST00000258909 FOSP01100 380 aaPredicted RBP21.71■■□□□ 1.07
TM6SF1-201ENST00000258909 FAM26DQ5JW98 314 aa21.71■■□□□ 1.07
TM6SF1-201ENST00000258909 MARCH8Q5T0T0 291 aa21.71■■□□□ 1.07
TM6SF1-201ENST00000258909 JAKMIP3Q5VZ66 844 aa21.71■■□□□ 1.07
TM6SF1-201ENST00000258909 BLOC1S2Q6QNY1 142 aa21.71■■□□□ 1.07
TM6SF1-201ENST00000258909 TGS1Q96RS0 853 aaKnown RBP21.71■■□□□ 1.07
TM6SF1-201ENST00000258909 SUGCTQ9HAC7 445 aa21.71■■□□□ 1.07
TM6SF1-201ENST00000258909 TUBE1Q9UJT0 475 aa21.71■■□□□ 1.07
TM6SF1-201ENST00000258909 INSL6Q9Y581 213 aa21.71■■□□□ 1.07
TM6SF1-201ENST00000258909 BDP1A6H8Y1 2624 aa21.71■■□□□ 1.07
TM6SF1-201ENST00000258909 SIP14410 1827 aa21.71■■□□□ 1.07
TM6SF1-201ENST00000258909 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms