RNA–Protein interactions for RNA: ENST00000258243.6

URB2-201, Transcript of URB2 ribosome biogenesis 2 homolog (S. cerevisiae), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene URB2, Length 5,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB2-201ENST00000258243 SNAP23O00161 211 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 SCARF1Q14162 830 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 DEFB132Q7Z7B7 95 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 ZBTB33Q86T24 672 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 CAPN7Q9Y6W3 813 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 ACTN4O43707 911 aaKnown RBP11.81□□□□□ -0.52
URB2-201ENST00000258243 GNGT1P63211 74 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 RASIP1Q5U651 963 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 GKAP1Q5VSY0 366 aaPredicted RBP11.81□□□□□ -0.52
URB2-201ENST00000258243 PARK7Q99497 189 aaKnown RBP11.81□□□□□ -0.52
URB2-201ENST00000258243 ACAD9Q9H845 621 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 RRP15Q9Y3B9 282 aaKnown RBP11.81□□□□□ -0.52
URB2-201ENST00000258243 ABCC12Q96J65 1359 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.81□□□□□ -0.52
URB2-201ENST00000258243 CREB3O43889 395 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 RPS12P25398 132 aaKnown RBP11.81□□□□□ -0.52
URB2-201ENST00000258243 ANXA13P27216 316 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 LIG3P49916 1009 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 ITIH3Q06033 890 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 MYO1EQ12965 1108 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 MTMR1Q13613 665 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 PPP2R5DQ14738 602 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 SF3B3Q15393 1217 aaKnown RBP11.81□□□□□ -0.52
URB2-201ENST00000258243 FYB2Q5VWT5 728 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 RASEFQ8IZ41 740 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 CLIC6Q96NY7 704 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 PPANQ9NQ55 473 aaKnown RBP11.81□□□□□ -0.52
URB2-201ENST00000258243 RAB20Q9NX57 234 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 ADAMTS13Q76LX8 1427 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 ASB14A6NK59 587 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 MFAP3P55082 362 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 SURF1Q15526 300 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 ADCK5Q3MIX3 580 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 TTC19Q6DKK2 380 aaPredicted RBP11.81□□□□□ -0.52
URB2-201ENST00000258243 CATSPER4Q7RTX7 472 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 MCUR1Q96AQ8 359 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 PAWRQ96IZ0 340 aaKnown RBP11.81□□□□□ -0.52
URB2-201ENST00000258243 MTFR1LQ9H019 292 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 SAR1BQ9Y6B6 198 aa11.81□□□□□ -0.52
URB2-201ENST00000258243 ZBBXA8MT70 800 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 MEIS1O00470 390 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 ATP8B1O43520 1251 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 MAN1A2O60476 641 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 MMP1P03956 469 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 SRGAP2CP0DJJ0 459 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 IFNAR1P17181 557 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 BPIFB4P59827 614 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 BTN2A1Q7KYR7 527 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 RSRC2Q7L4I2 434 aaKnown RBP11.8□□□□□ -0.52
URB2-201ENST00000258243 ZNF34Q8IZ26 560 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 RABGGTAQ92696 567 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 NT5C1BQ96P26 610 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 PLA2G12BQ9BX93 195 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 STK17AQ9UEE5 414 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 PCDHA6Q9UN73 950 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 PCDHA8Q9Y5H6 950 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 CLIC4Q9Y696 253 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 LMNB1P20700 586 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 NFX1Q12986 1120 aaKnown RBP11.8□□□□□ -0.52
URB2-201ENST00000258243 PAK2Q13177 524 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 GPIHBP1Q8IV16 184 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 CCDC89Q8N998 374 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 FAM71BQ8TC56 605 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 RPAP3Q9H6T3 665 aaPredicted RBP11.8□□□□□ -0.52
URB2-201ENST00000258243 DCP1AQ9NPI6 582 aaPredicted RBP11.8□□□□□ -0.52
URB2-201ENST00000258243 PCDHB4Q9Y5E5 795 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 PSMC2P35998 433 aaKnown RBP11.8□□□□□ -0.52
URB2-201ENST00000258243 PHEXP78562 749 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 SREBF2Q12772 1141 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 MUM1Q2TAK8 710 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 PRPF38AQ8NAV1 312 aaKnown RBP11.8□□□□□ -0.52
URB2-201ENST00000258243 NLRP4Q96MN2 994 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 TMEM47Q9BQJ4 181 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.8□□□□□ -0.52
URB2-201ENST00000258243 UTP11Q9Y3A2 253 aaKnown RBP11.8□□□□□ -0.52
URB2-201ENST00000258243 SETD1BQ9UPS6 1966 aaKnown RBP11.8□□□□□ -0.52
URB2-201ENST00000258243 ATP5DP30049 168 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 GMPSP49915 693 aaPredicted RBP11.8□□□□□ -0.52
URB2-201ENST00000258243 FOXO4P98177 505 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 ITKQ08881 620 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 FLOT2Q14254 428 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 GEN1Q17RS7 908 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 ANGEL2Q5VTE6 544 aaKnown RBP11.8□□□□□ -0.52
URB2-201ENST00000258243 TYW1BQ6NUM6 668 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 RBM46Q8TBY0 533 aaKnown RBP11.8□□□□□ -0.52
URB2-201ENST00000258243 UBN2Q6ZU65 1347 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 PHLPP2Q6ZVD8 1323 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 PPP6R2O75170 966 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 RUFY4Q6ZNE9 571 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 VPS52Q8N1B4 723 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 ZNF280CQ8ND82 737 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 RPF1Q9H9Y2 349 aaKnown RBP11.8□□□□□ -0.52
URB2-201ENST00000258243 MED4Q9NPJ6 270 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 SPTLC3Q9NUV7 552 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 GGA3Q9NZ52 723 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 PCDHA7Q9UN72 937 aa11.8□□□□□ -0.52
URB2-201ENST00000258243 STAT3P40763 770 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 TFAMQ00059 246 aaKnown RBP11.79□□□□□ -0.52
URB2-201ENST00000258243 ITPK1Q13572 414 aa11.79□□□□□ -0.52
URB2-201ENST00000258243 FBXO38Q6PIJ6 1188 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms