RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 COA7Q96BR5 231 aa18.65■□□□□ 0.58
CDK4-201ENST00000257904 GNA14O95837 355 aa18.65■□□□□ 0.58
CDK4-201ENST00000257904 GUCY2CP25092 1073 aa18.65■□□□□ 0.58
CDK4-201ENST00000257904 LSP1P33241 339 aa18.65■□□□□ 0.58
CDK4-201ENST00000257904 MARSP56192 900 aaKnown RBP18.65■□□□□ 0.58
CDK4-201ENST00000257904 KIAA0753Q2KHM9 967 aa18.65■□□□□ 0.58
CDK4-201ENST00000257904 SPATS2Q86XZ4 545 aaKnown RBP18.65■□□□□ 0.58
CDK4-201ENST00000257904 TRIM59Q8IWR1 403 aa18.65■□□□□ 0.58
CDK4-201ENST00000257904 RPGRQ92834 1020 aaKnown RBP18.65■□□□□ 0.58
CDK4-201ENST00000257904 PANK4Q9NVE7 773 aa18.65■□□□□ 0.58
CDK4-201ENST00000257904 PACSIN2Q9UNF0 486 aaPredicted RBP18.65■□□□□ 0.58
CDK4-201ENST00000257904 FRMPD2Q68DX3 1309 aaPredicted RBP18.64■□□□□ 0.57
CDK4-201ENST00000257904 SERPINB2P05120 415 aa18.64■□□□□ 0.57
CDK4-201ENST00000257904 PDHBP11177 359 aa18.64■□□□□ 0.57
CDK4-201ENST00000257904 NR1D1P20393 614 aa18.64■□□□□ 0.57
CDK4-201ENST00000257904 BTDP43251 543 aa18.64■□□□□ 0.57
CDK4-201ENST00000257904 RAPGEF1Q13905 1077 aa18.64■□□□□ 0.57
CDK4-201ENST00000257904 CERS3Q8IU89 383 aa18.64■□□□□ 0.57
CDK4-201ENST00000257904 USP38Q8NB14 1042 aa18.64■□□□□ 0.57
CDK4-201ENST00000257904 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.64■□□□□ 0.57
CDK4-201ENST00000257904 PACSIN1Q9BY11 444 aa18.64■□□□□ 0.57
CDK4-201ENST00000257904 EPN3Q9H201 632 aa18.64■□□□□ 0.57
CDK4-201ENST00000257904 AIPL1Q9NZN9 384 aa18.64■□□□□ 0.57
CDK4-201ENST00000257904 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.64■□□□□ 0.57
CDK4-201ENST00000257904 RAD51CO43502 376 aa18.64■□□□□ 0.57
CDK4-201ENST00000257904 MYBP10242 640 aa18.64■□□□□ 0.57
CDK4-201ENST00000257904 TNNC1P63316 161 aa18.64■□□□□ 0.57
CDK4-201ENST00000257904 PPP4R3AQ6IN85 833 aa18.64■□□□□ 0.57
CDK4-201ENST00000257904 ATP6V1G3Q96LB4 118 aa18.64■□□□□ 0.57
CDK4-201ENST00000257904 FGFBP2Q9BYJ0 223 aa18.64■□□□□ 0.57
CDK4-201ENST00000257904 RGS17Q9UGC6 210 aaPredicted RBP18.64■□□□□ 0.57
CDK4-201ENST00000257904 TMEM59LQ9UK28 342 aa18.64■□□□□ 0.57
CDK4-201ENST00000257904 CDK5RAP2Q96SN8 1893 aa18.64■□□□□ 0.57
CDK4-201ENST00000257904 GUCY1A3Q02108 690 aa18.63■□□□□ 0.57
CDK4-201ENST00000257904 KLHL30Q0D2K2 578 aa18.63■□□□□ 0.57
CDK4-201ENST00000257904 TRADDQ15628 312 aa18.63■□□□□ 0.57
CDK4-201ENST00000257904 TEX11Q8IYF3 940 aa18.63■□□□□ 0.57
CDK4-201ENST00000257904 FAM133AQ8N9E0 248 aa18.63■□□□□ 0.57
CDK4-201ENST00000257904 ADAMTS1Q9UHI8 967 aa18.63■□□□□ 0.57
CDK4-201ENST00000257904 LEMD3Q9Y2U8 911 aa18.63■□□□□ 0.57
CDK4-201ENST00000257904 CES2O00748 559 aa18.62■□□□□ 0.57
CDK4-201ENST00000257904 PPP1R37O75864 691 aa18.62■□□□□ 0.57
CDK4-201ENST00000257904 HSPA9P38646 679 aaKnown RBP18.62■□□□□ 0.57
CDK4-201ENST00000257904 TNNI2P48788 182 aa18.62■□□□□ 0.57
CDK4-201ENST00000257904 RNASE9P60153 205 aaKnown RBP18.62■□□□□ 0.57
CDK4-201ENST00000257904 ARID5AQ03989 594 aa18.62■□□□□ 0.57
CDK4-201ENST00000257904 ASIC2Q16515 512 aa18.62■□□□□ 0.57
CDK4-201ENST00000257904 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.62■□□□□ 0.57
CDK4-201ENST00000257904 PAGR1Q9BTK6 254 aa18.62■□□□□ 0.57
CDK4-201ENST00000257904 GANQ9H2C0 597 aa18.62■□□□□ 0.57
CDK4-201ENST00000257904 KANSL2Q9H9L4 492 aa18.62■□□□□ 0.57
CDK4-201ENST00000257904 GPR75-ASB3A0A0A6YYF3 556 aa18.62■□□□□ 0.57
CDK4-201ENST00000257904 BTNL10A8MVZ5 291 aa18.62■□□□□ 0.57
CDK4-201ENST00000257904 HMGB1P1B2RPK0 211 aaPredicted RBP18.62■□□□□ 0.57
CDK4-201ENST00000257904 NAA35Q5VZE5 725 aa18.62■□□□□ 0.57
CDK4-201ENST00000257904 ZNF804AQ7Z570 1209 aa18.62■□□□□ 0.57
CDK4-201ENST00000257904 NELFCDQ8IXH7 590 aa18.62■□□□□ 0.57
CDK4-201ENST00000257904 HAS1Q92839 578 aa18.62■□□□□ 0.57
CDK4-201ENST00000257904 POLD4Q9HCU8 107 aa18.62■□□□□ 0.57
CDK4-201ENST00000257904 BMP2KQ9NSY1 1161 aaPredicted RBP18.62■□□□□ 0.57
CDK4-201ENST00000257904 TBC1D7Q9P0N9 293 aa18.62■□□□□ 0.57
CDK4-201ENST00000257904 DDX25Q9UHL0 483 aaKnown RBP18.62■□□□□ 0.57
CDK4-201ENST00000257904 PCDHA2Q9Y5H9 948 aa18.62■□□□□ 0.57
CDK4-201ENST00000257904 MEFVO15553 781 aaPredicted RBP18.61■□□□□ 0.57
CDK4-201ENST00000257904 KIAA0754O94854 1291 aa18.61■□□□□ 0.57
CDK4-201ENST00000257904 PTGISQ16647 500 aa18.61■□□□□ 0.57
CDK4-201ENST00000257904 FBXW10Q5XX13 1052 aa18.61■□□□□ 0.57
CDK4-201ENST00000257904 KLHL7Q8IXQ5 586 aa18.61■□□□□ 0.57
CDK4-201ENST00000257904 EIF1ADQ8N9N8 165 aaKnown RBP18.61■□□□□ 0.57
CDK4-201ENST00000257904 TAF4BQ92750 862 aa18.61■□□□□ 0.57
CDK4-201ENST00000257904 AKT1S1Q96B36 256 aa18.61■□□□□ 0.57
CDK4-201ENST00000257904 TAF1DQ9H5J8 278 aaPredicted RBP18.61■□□□□ 0.57
CDK4-201ENST00000257904 MDH1P40925 334 aaKnown RBP18.61■□□□□ 0.57
CDK4-201ENST00000257904 ITGB3BPQ13352 177 aaPredicted RBP18.61■□□□□ 0.57
CDK4-201ENST00000257904 RPS6KA1Q15418 735 aa18.61■□□□□ 0.57
CDK4-201ENST00000257904 ENOX2Q16206 610 aaKnown RBP18.61■□□□□ 0.57
CDK4-201ENST00000257904 ASPRV1Q53RT3 343 aa18.61■□□□□ 0.57
CDK4-201ENST00000257904 HYIQ5T013 277 aa18.61■□□□□ 0.57
CDK4-201ENST00000257904 MCTP2Q6DN12 878 aa18.61■□□□□ 0.57
CDK4-201ENST00000257904 CCDC65Q8IXS2 484 aa18.61■□□□□ 0.57
CDK4-201ENST00000257904 ZC3H3Q8IXZ2 948 aaKnown RBP18.61■□□□□ 0.57
CDK4-201ENST00000257904 CNPY4Q8N129 248 aa18.61■□□□□ 0.57
CDK4-201ENST00000257904 ZNF473Q8WTR7 871 aaKnown RBP18.61■□□□□ 0.57
CDK4-201ENST00000257904 GPR101Q96P66 508 aaPredicted RBP18.61■□□□□ 0.57
CDK4-201ENST00000257904 NT5C3AQ9H0P0 336 aa18.61■□□□□ 0.57
CDK4-201ENST00000257904 ISCUQ9H1K1 167 aa18.61■□□□□ 0.57
CDK4-201ENST00000257904 KCTD10Q9H3F6 313 aa18.61■□□□□ 0.57
CDK4-201ENST00000257904 YY1AP1Q9H869 796 aa18.61■□□□□ 0.57
CDK4-201ENST00000257904 PLAAQ9Y263 795 aa18.61■□□□□ 0.57
CDK4-201ENST00000257904 ATAD5Q96QE3 1844 aa18.6■□□□□ 0.57
CDK4-201ENST00000257904 KDM3AQ9Y4C1 1321 aa18.6■□□□□ 0.57
CDK4-201ENST00000257904 KCNK3O14649 394 aa18.6■□□□□ 0.57
CDK4-201ENST00000257904 SSBP05455 408 aaKnown RBP eCLIP18.6■□□□□ 0.57
CDK4-201ENST00000257904 HNRNPH1P31943 449 aaKnown RBP18.6■□□□□ 0.57
CDK4-201ENST00000257904 UBE2SQ16763 222 aa18.6■□□□□ 0.57
CDK4-201ENST00000257904 CRY2Q49AN0 593 aa18.6■□□□□ 0.57
CDK4-201ENST00000257904 PPP1R18Q6NYC8 613 aa18.6■□□□□ 0.57
CDK4-201ENST00000257904 KCNV1Q6PIU1 500 aa18.6■□□□□ 0.57
CDK4-201ENST00000257904 POTEAQ6S8J7 498 aa18.6■□□□□ 0.57
CDK4-201ENST00000257904 OTUD6BQ8N6M0 293 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms