RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 Q4G0T1 1027 aa18.28■□□□□ 0.52
UBQLN1-201ENST00000257468 HGSNATQ68CP4 663 aa18.28■□□□□ 0.52
UBQLN1-201ENST00000257468 HAUS3Q68CZ6 603 aa18.28■□□□□ 0.52
UBQLN1-201ENST00000257468 REEP2Q9BRK0 252 aa18.28■□□□□ 0.52
UBQLN1-201ENST00000257468 SALL4Q9UJQ4 1053 aa18.28■□□□□ 0.52
UBQLN1-201ENST00000257468 PRR12Q9ULL5 1215 aa18.28■□□□□ 0.52
UBQLN1-201ENST00000257468 ATRNL1Q5VV63 1379 aa18.27■□□□□ 0.52
UBQLN1-201ENST00000257468 FRMD3A2A2Y4 597 aa18.27■□□□□ 0.52
UBQLN1-201ENST00000257468 RSPH10B2B2RC85 870 aa18.27■□□□□ 0.52
UBQLN1-201ENST00000257468 TLR2O60603 784 aa18.27■□□□□ 0.52
UBQLN1-201ENST00000257468 RSPH10BP0C881 870 aa18.27■□□□□ 0.52
UBQLN1-201ENST00000257468 GIT2Q14161 759 aa18.27■□□□□ 0.52
UBQLN1-201ENST00000257468 MOXD1Q6UVY6 613 aa18.27■□□□□ 0.52
UBQLN1-201ENST00000257468 SFR1Q86XK3 245 aa18.27■□□□□ 0.52
UBQLN1-201ENST00000257468 ACER1Q8TDN7 264 aa18.27■□□□□ 0.52
UBQLN1-201ENST00000257468 C7orf43Q8WVR3 580 aa18.27■□□□□ 0.52
UBQLN1-201ENST00000257468 TBC1D5Q92609 795 aa18.27■□□□□ 0.52
UBQLN1-201ENST00000257468 L1RE1Q9UN81 338 aa18.27■□□□□ 0.52
UBQLN1-201ENST00000257468 NPM3O75607 178 aaKnown RBP18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 POLR2FP61218 127 aaKnown RBP18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 ADAM9Q13443 819 aa18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 TDRD12Q587J7 1177 aaKnown RBP18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 FOXR2Q6PJQ5 311 aa18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 TRIM59Q8IWR1 403 aa18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 CAGE1Q8TC20 777 aa18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 CEP63Q96MT8 703 aa18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 TSGA10Q9BZW7 698 aa18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 PDE11AQ9HCR9 933 aa18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 ERICH4A6NGS2 130 aa18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 EML1O00423 815 aa18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 PPIP5K2O43314 1243 aa18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 C21orf2O43822 256 aa18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 ERLIN1O75477 346 aa18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 ZMYND10O75800 440 aa18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 LCA5LO95447 670 aa18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 RPA1P27694 616 aa18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 USP14P54578 494 aa18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 ASTE1Q2TB18 679 aaPredicted RBP18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 FAM83BQ5T0W9 1011 aa18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 SAMD1Q6SPF0 538 aaPredicted RBP18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 ZFP91Q96JP5 570 aaPredicted RBP18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 PSMB7Q99436 277 aa18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 RGL1Q9NZL6 768 aa18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 VAV3Q9UKW4 847 aa18.26■□□□□ 0.51
UBQLN1-201ENST00000257468 ANO9A1A5B4 782 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 USO1O60763 962 aaKnown RBP18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 ENTPD3O75355 529 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 KIF20AO95235 890 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 MYBP10242 640 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 HOXD13P35453 343 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 MAGEA1P43355 309 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 TUBB4BP68371 445 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 UBXN2AP68543 259 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 C2orf54Q08AI8 447 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 CC2D2BQ6DHV5 1058 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 CDAN1Q8IWY9 1227 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 DNM3Q9UQ16 869 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 MYH10P35580 1976 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 PRPF6O94906 941 aaKnown RBP18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 NR2F2P24468 414 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 HOXA7P31268 230 aaPredicted RBP18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 ZNF76P36508 570 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 MMP14P50281 582 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 RASSF7Q02833 373 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 ARID5AQ03989 594 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 ENOX2Q16206 610 aaKnown RBP18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 HDXQ7Z353 690 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 SYT2Q8N9I0 419 aaPredicted RBP18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 ERMNQ8TAM6 284 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 COG1Q8WTW3 980 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 HINFPQ9BQA5 517 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 RUSC1Q9BVN2 902 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 BHMT2Q9H2M3 363 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 CEP72Q9P209 647 aa18.25■□□□□ 0.51
UBQLN1-201ENST00000257468 PITPNM2Q9BZ72 1349 aa18.24■□□□□ 0.51
UBQLN1-201ENST00000257468 NCK2O43639 380 aa18.24■□□□□ 0.51
UBQLN1-201ENST00000257468 N4BP1O75113 896 aaKnown RBP18.24■□□□□ 0.51
UBQLN1-201ENST00000257468 POLD1P28340 1107 aa18.24■□□□□ 0.51
UBQLN1-201ENST00000257468 ZYXQ15942 572 aaKnown RBP18.24■□□□□ 0.51
UBQLN1-201ENST00000257468 CCDC174Q6PII3 467 aa18.24■□□□□ 0.51
UBQLN1-201ENST00000257468 BTNL9Q6UXG8 535 aa18.24■□□□□ 0.51
UBQLN1-201ENST00000257468 CNKSR1Q969H4 720 aa18.24■□□□□ 0.51
UBQLN1-201ENST00000257468 SMARCAL1Q9NZC9 954 aa18.24■□□□□ 0.51
UBQLN1-201ENST00000257468 TBX3O15119 743 aa18.24■□□□□ 0.51
UBQLN1-201ENST00000257468 BUB1O43683 1085 aa18.24■□□□□ 0.51
UBQLN1-201ENST00000257468 TACC1O75410 805 aa18.24■□□□□ 0.51
UBQLN1-201ENST00000257468 CFBP00751 764 aa18.24■□□□□ 0.51
UBQLN1-201ENST00000257468 FOSP01100 380 aaPredicted RBP18.24■□□□□ 0.51
UBQLN1-201ENST00000257468 CXCR5P32302 372 aa18.24■□□□□ 0.51
UBQLN1-201ENST00000257468 NFRKBQ6P4R8 1299 aa18.24■□□□□ 0.51
UBQLN1-201ENST00000257468 TRIM58Q8NG06 486 aa18.24■□□□□ 0.51
UBQLN1-201ENST00000257468 EHD2Q9NZN4 543 aa18.24■□□□□ 0.51
UBQLN1-201ENST00000257468 SNX12Q9UMY4 172 aa18.24■□□□□ 0.51
UBQLN1-201ENST00000257468 CHMP2AO43633 222 aa18.23■□□□□ 0.51
UBQLN1-201ENST00000257468 RAD17O75943 681 aa18.23■□□□□ 0.51
UBQLN1-201ENST00000257468 ACTN1P12814 892 aa18.23■□□□□ 0.51
UBQLN1-201ENST00000257468 STAT2P52630 851 aa18.23■□□□□ 0.51
UBQLN1-201ENST00000257468 MARSP56192 900 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms