RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 PEX3P56589 373 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 TKFCQ3LXA3 575 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 HAUS3Q68CZ6 603 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 TMEM143Q96AN5 459 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 HINFPQ9BQA5 517 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 TNNT1P13805 278 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 SFPQP23246 707 aaKnown RBP eCLIP12.93□□□□□ -0.34
LIN28A-201ENST00000254231 KLK7P49862 253 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 SNAPC2Q13487 334 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 MORC3Q14149 939 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 FILIP1LQ4L180 1135 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 FAM26FQ5R3K3 315 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 PDXDC2PQ6P474 469 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 PPFIBP1Q86W92 1011 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 CACTINQ8WUQ7 758 aaKnown RBP12.93□□□□□ -0.34
LIN28A-201ENST00000254231 CLEC4DQ8WXI8 215 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 FAM49AQ9H0Q0 323 aaPredicted RBP12.93□□□□□ -0.34
LIN28A-201ENST00000254231 WRAP73Q9P2S5 460 aaPredicted RBP12.93□□□□□ -0.34
LIN28A-201ENST00000254231 ZNF214Q9UL59 606 aaPredicted RBP12.93□□□□□ -0.34
LIN28A-201ENST00000254231 TRPC6Q9Y210 931 aa12.93□□□□□ -0.34
LIN28A-201ENST00000254231 NAV1Q8NEY1 1877 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 C19orf81C9J6K1 198 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 BTBD19C9JJ37 291 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 CYP2C19P33261 490 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 PGM5Q15124 567 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 DNAAF5Q86Y56 855 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 LRRC71Q8N4P6 559 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 REEP2Q9BRK0 252 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 BLOC1S4Q9NUP1 217 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 PGAP2Q9UHJ9 254 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 DACH1Q9UI36 760 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 DOCK2Q92608 1830 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 CASP5P51878 434 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 LMBRD2Q68DH5 695 aaPredicted RBP12.92□□□□□ -0.34
LIN28A-201ENST00000254231 ANKRD40Q6AI12 368 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 MMP19Q99542 508 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 ECM29Q5VYK3 1845 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 SLC16A4O15374 487 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 GGPS1O95749 300 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 TBC1D8O95759 1140 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 MYBP10242 640 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 TRIM21P19474 475 aaKnown RBP12.92□□□□□ -0.34
LIN28A-201ENST00000254231 SSTR3P32745 418 aaPredicted RBP12.92□□□□□ -0.34
LIN28A-201ENST00000254231 SREBF1P36956 1147 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 NAP1L1P55209 391 aaKnown RBP12.92□□□□□ -0.34
LIN28A-201ENST00000254231 ITGB3BPQ13352 177 aaPredicted RBP12.92□□□□□ -0.34
LIN28A-201ENST00000254231 AP3B2Q13367 1082 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 MKRN4PQ13434 485 aaPredicted RBP12.92□□□□□ -0.34
LIN28A-201ENST00000254231 UGCGQ16739 394 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 DHX37Q8IY37 1157 aaKnown RBP12.92□□□□□ -0.34
LIN28A-201ENST00000254231 SLFN12Q8IYM2 578 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 MTMR9Q96QG7 549 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 MXRA8Q9BRK3 442 aa12.92□□□□□ -0.34
LIN28A-201ENST00000254231 LRRIQ4A6NIV6 560 aa12.91□□□□□ -0.34
LIN28A-201ENST00000254231 NPM3O75607 178 aaKnown RBP12.91□□□□□ -0.34
LIN28A-201ENST00000254231 OSBPP22059 807 aa12.91□□□□□ -0.34
LIN28A-201ENST00000254231 USP11P51784 963 aa12.91□□□□□ -0.34
LIN28A-201ENST00000254231 RAD54LQ92698 747 aa12.91□□□□□ -0.34
LIN28A-201ENST00000254231 ZSWIM4Q9H7M6 989 aa12.91□□□□□ -0.34
LIN28A-201ENST00000254231 PXMP2Q9NR77 195 aa12.91□□□□□ -0.34
LIN28A-201ENST00000254231 LTBP3Q9NS15 1303 aa12.91□□□□□ -0.34
LIN28A-201ENST00000254231 TPM3P06753 285 aa12.91□□□□□ -0.34
LIN28A-201ENST00000254231 LLGL1Q15334 1064 aa12.91□□□□□ -0.34
LIN28A-201ENST00000254231 FAM178BQ8IXR5 827 aa12.91□□□□□ -0.34
LIN28A-201ENST00000254231 MLKLQ8NB16 471 aa12.91□□□□□ -0.34
LIN28A-201ENST00000254231 TTC16Q8NEE8 873 aa12.91□□□□□ -0.34
LIN28A-201ENST00000254231 NOC4LQ9BVI4 516 aaKnown RBP12.91□□□□□ -0.34
LIN28A-201ENST00000254231 CYP39A1Q9NYL5 469 aa12.91□□□□□ -0.34
LIN28A-201ENST00000254231 TFR2Q9UP52 801 aa12.91□□□□□ -0.34
LIN28A-201ENST00000254231 CCDC65Q8IXS2 484 aa12.9□□□□□ -0.34
LIN28A-201ENST00000254231 RNF169Q8NCN4 708 aa12.9□□□□□ -0.34
LIN28A-201ENST00000254231 DRC1Q96MC2 740 aa12.9□□□□□ -0.34
LIN28A-201ENST00000254231 ESYT2A0FGR8 921 aa12.9□□□□□ -0.34
LIN28A-201ENST00000254231 KCNJ18B7U540 433 aa12.9□□□□□ -0.34
LIN28A-201ENST00000254231 K7ENM7 598 aa12.9□□□□□ -0.34
LIN28A-201ENST00000254231 TXNP10599 105 aaKnown RBP12.9□□□□□ -0.34
LIN28A-201ENST00000254231 KCNJ12Q14500 433 aa12.9□□□□□ -0.34
LIN28A-201ENST00000254231 STXBP2Q15833 593 aa12.9□□□□□ -0.34
LIN28A-201ENST00000254231 DAGLBQ8NCG7 672 aa12.9□□□□□ -0.34
LIN28A-201ENST00000254231 RBM46Q8TBY0 533 aaKnown RBP12.9□□□□□ -0.34
LIN28A-201ENST00000254231 ANKFY1Q9P2R3 1169 aa12.9□□□□□ -0.34
LIN28A-201ENST00000254231 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.9□□□□□ -0.34
LIN28A-201ENST00000254231 V9GYY5 206 aaPredicted RBP12.9□□□□□ -0.34
LIN28A-201ENST00000254231 ZNF831Q5JPB2 1677 aa12.9□□□□□ -0.34
LIN28A-201ENST00000254231 C5orf42Q9H799 3197 aa12.9□□□□□ -0.34
LIN28A-201ENST00000254231 SLITRK3O94933 977 aa12.9□□□□□ -0.34
LIN28A-201ENST00000254231 SPAG1Q07617 926 aa12.9□□□□□ -0.34
LIN28A-201ENST00000254231 COASYQ13057 564 aa12.9□□□□□ -0.34
LIN28A-201ENST00000254231 IGSF22Q8N9C0 903 aa12.9□□□□□ -0.34
LIN28A-201ENST00000254231 APOL6Q9BWW8 343 aa12.9□□□□□ -0.34
LIN28A-201ENST00000254231 LZTFL1Q9NQ48 299 aa12.9□□□□□ -0.34
LIN28A-201ENST00000254231 RBPJLQ9UBG7 517 aa12.9□□□□□ -0.34
LIN28A-201ENST00000254231 ARAP2Q8WZ64 1704 aa12.9□□□□□ -0.35
LIN28A-201ENST00000254231 CCND2P30279 289 aa12.89□□□□□ -0.35
LIN28A-201ENST00000254231 MDM2Q00987 491 aaPredicted RBP12.89□□□□□ -0.35
LIN28A-201ENST00000254231 E2F4Q16254 413 aa12.89□□□□□ -0.35
LIN28A-201ENST00000254231 PADI6Q6TGC4 694 aa12.89□□□□□ -0.35
LIN28A-201ENST00000254231 OTOP1Q7RTM1 612 aa12.89□□□□□ -0.35
LIN28A-201ENST00000254231 ZSCAN30Q86W11 494 aa12.89□□□□□ -0.35
LIN28A-201ENST00000254231 BRI3BPQ8WY22 251 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms