RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 STAT3P40763 770 aa16.35■□□□□ 0.21
UBE4B-201ENST00000253251 QARSP47897 775 aaKnown RBP16.35■□□□□ 0.21
UBE4B-201ENST00000253251 EPHA7Q15375 998 aa16.35■□□□□ 0.21
UBE4B-201ENST00000253251 VCPKMTQ9H867 229 aa16.35■□□□□ 0.21
UBE4B-201ENST00000253251 RBL2Q08999 1139 aa16.35■□□□□ 0.21
UBE4B-201ENST00000253251 LONRF2Q1L5Z9 754 aa16.35■□□□□ 0.21
UBE4B-201ENST00000253251 CCDC105Q8IYK2 499 aa16.35■□□□□ 0.21
UBE4B-201ENST00000253251 DESI2Q9BSY9 194 aa16.35■□□□□ 0.21
UBE4B-201ENST00000253251 TUFT1Q9NNX1 390 aa16.35■□□□□ 0.21
UBE4B-201ENST00000253251 RNF14Q9UBS8 474 aa16.35■□□□□ 0.21
UBE4B-201ENST00000253251 K7ERI5 159 aa16.35■□□□□ 0.21
UBE4B-201ENST00000253251 STAM2O75886 525 aa16.35■□□□□ 0.21
UBE4B-201ENST00000253251 NDUFB10O96000 172 aa16.35■□□□□ 0.21
UBE4B-201ENST00000253251 GUF1Q8N442 669 aaKnown RBP16.35■□□□□ 0.21
UBE4B-201ENST00000253251 ANKS4BQ8N8V4 417 aa16.35■□□□□ 0.21
UBE4B-201ENST00000253251 CPVLQ9H3G5 476 aa16.35■□□□□ 0.21
UBE4B-201ENST00000253251 RRAGDQ9NQL2 400 aaPredicted RBP16.35■□□□□ 0.21
UBE4B-201ENST00000253251 EFCAB8A8MWE9 144 aa16.35■□□□□ 0.21
UBE4B-201ENST00000253251 SORBS3O60504 671 aa16.35■□□□□ 0.21
UBE4B-201ENST00000253251 SRGNP10124 158 aa16.35■□□□□ 0.21
UBE4B-201ENST00000253251 SNAP25P60880 206 aa16.35■□□□□ 0.21
UBE4B-201ENST00000253251 COG2Q14746 738 aa16.35■□□□□ 0.21
UBE4B-201ENST00000253251 PDZD4Q76G19 769 aaPredicted RBP16.35■□□□□ 0.21
UBE4B-201ENST00000253251 DPEP1P16444 411 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 ALDH3A1P30838 453 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 GTF2F1P35269 517 aaKnown RBP eCLIP16.34■□□□□ 0.213e-11■■■■■ 40.5
UBE4B-201ENST00000253251 CUL4BQ13620 913 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 MMS19Q96T76 1030 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 ZNF233A6NK53 670 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 SERPING1P05155 500 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 ABCB4P21439 1286 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 PSMC5P62195 406 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 C17orf53Q8N3J3 647 aaPredicted RBP16.34■□□□□ 0.21
UBE4B-201ENST00000253251 OTUD6BQ8N6M0 293 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 NSMCE1Q8WV22 266 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 HAUS1Q96CS2 278 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 ZDHHC15Q96MV8 337 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 RIOK1Q9BRS2 568 aaKnown RBP16.34■□□□□ 0.21
UBE4B-201ENST00000253251 NKIRAS1Q9NYS0 192 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 POTEMA6NI47 508 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 LPXNO60711 386 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 IL1R1P14778 569 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 PADI6Q6TGC4 694 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 PSMD14O00487 310 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 PLSCR1O15162 318 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 CACNB1Q02641 598 aaPredicted RBP16.34■□□□□ 0.21
UBE4B-201ENST00000253251 KRT31Q15323 416 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 CEP55Q53EZ4 464 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 XRRA1Q6P2D8 792 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 POTEDQ86YR6 584 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 MB21D1Q8N884 522 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 CALR3Q96L12 384 aaKnown RBP16.34■□□□□ 0.21
UBE4B-201ENST00000253251 FAM193BQ96PV7 902 aaPredicted RBP16.34■□□□□ 0.21
UBE4B-201ENST00000253251 GOLPH3LQ9H4A5 285 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 TMEM260Q9NX78 707 aa16.34■□□□□ 0.21
UBE4B-201ENST00000253251 FBXO2Q9UK22 296 aaPredicted RBP16.34■□□□□ 0.21
UBE4B-201ENST00000253251 TLDC2A0PJX2 215 aa16.33■□□□□ 0.21
UBE4B-201ENST00000253251 ASB14A6NK59 587 aa16.33■□□□□ 0.21
UBE4B-201ENST00000253251 KIF28PB7ZC32 967 aa16.33■□□□□ 0.21
UBE4B-201ENST00000253251 PDHBP11177 359 aa16.33■□□□□ 0.21
UBE4B-201ENST00000253251 GNAT1P11488 350 aa16.33■□□□□ 0.21
UBE4B-201ENST00000253251 NAALADL2Q58DX5 795 aa16.33■□□□□ 0.21
UBE4B-201ENST00000253251 EHD4Q9H223 541 aa16.33■□□□□ 0.21
UBE4B-201ENST00000253251 RPAP3Q9H6T3 665 aaPredicted RBP16.33■□□□□ 0.21
UBE4B-201ENST00000253251 GCNT4Q9P109 453 aa16.33■□□□□ 0.21
UBE4B-201ENST00000253251 IPO5O00410 1097 aaKnown RBP16.33■□□□□ 0.2
UBE4B-201ENST00000253251 MED7O43513 233 aa16.33■□□□□ 0.2
UBE4B-201ENST00000253251 MAN1A1P33908 653 aa16.33■□□□□ 0.2
UBE4B-201ENST00000253251 TTLL4Q14679 1199 aa16.33■□□□□ 0.2
UBE4B-201ENST00000253251 C6orf163Q5TEZ5 329 aa16.33■□□□□ 0.2
UBE4B-201ENST00000253251 ST7Q9NRC1 585 aa16.33■□□□□ 0.2
UBE4B-201ENST00000253251 FMN2Q9NZ56 1722 aa16.33■□□□□ 0.2
UBE4B-201ENST00000253251 THAP12O43422 761 aa16.33■□□□□ 0.2
UBE4B-201ENST00000253251 RNF8O76064 485 aa16.33■□□□□ 0.2
UBE4B-201ENST00000253251 BBOF1Q8ND07 529 aa16.33■□□□□ 0.2
UBE4B-201ENST00000253251 TEX13BQ9BXU2 312 aa16.33■□□□□ 0.2
UBE4B-201ENST00000253251 C2orf40Q9H1Z8 148 aa16.33■□□□□ 0.2
UBE4B-201ENST00000253251 PLCB1Q9NQ66 1216 aa16.33■□□□□ 0.2
UBE4B-201ENST00000253251 LGALS16A8MUM7 142 aa16.33■□□□□ 0.2
UBE4B-201ENST00000253251 CLIC2O15247 247 aa16.33■□□□□ 0.2
UBE4B-201ENST00000253251 CTNND1O60716 968 aaKnown RBP16.33■□□□□ 0.2
UBE4B-201ENST00000253251 KLHL7Q8IXQ5 586 aa16.33■□□□□ 0.2
UBE4B-201ENST00000253251 ATRIPQ8WXE1 791 aa16.33■□□□□ 0.2
UBE4B-201ENST00000253251 SELENOSQ9BQE4 189 aa16.33■□□□□ 0.2
UBE4B-201ENST00000253251 TYW1Q9NV66 732 aaKnown RBP16.33■□□□□ 0.2
UBE4B-201ENST00000253251 PCDHB4Q9Y5E5 795 aa16.33■□□□□ 0.2
UBE4B-201ENST00000253251 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.32■□□□□ 0.2
UBE4B-201ENST00000253251 KCNK3O14649 394 aa16.32■□□□□ 0.2
UBE4B-201ENST00000253251 EZH2Q15910 746 aaKnown RBP16.32■□□□□ 0.2
UBE4B-201ENST00000253251 SHC4Q6S5L8 630 aa16.32■□□□□ 0.2
UBE4B-201ENST00000253251 TAOK1Q7L7X3 1001 aa16.32■□□□□ 0.2
UBE4B-201ENST00000253251 DAGLBQ8NCG7 672 aa16.32■□□□□ 0.2
UBE4B-201ENST00000253251 ZNF280CQ8ND82 737 aa16.32■□□□□ 0.2
UBE4B-201ENST00000253251 TNFAIP2Q03169 654 aa16.32■□□□□ 0.2
UBE4B-201ENST00000253251 R3HDM1Q15032 1099 aaKnown RBP16.32■□□□□ 0.2
UBE4B-201ENST00000253251 LGSNQ5TDP6 509 aa16.32■□□□□ 0.2
UBE4B-201ENST00000253251 ELOA2Q8IYF1 753 aaPredicted RBP16.32■□□□□ 0.2
UBE4B-201ENST00000253251 CDC23Q9UJX2 597 aa16.32■□□□□ 0.2
UBE4B-201ENST00000253251 FAM205AQ6ZU69 1335 aa16.32■□□□□ 0.2
UBE4B-201ENST00000253251 CNTNAP5Q8WYK1 1306 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms