RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 DEFB128Q7Z7B8 93 aa26.15■■□□□ 1.78
LSM4-201ENST00000252816 PLA2G4DQ86XP0 818 aa26.15■■□□□ 1.78
LSM4-201ENST00000252816 RPUSD2Q8IZ73 545 aaKnown RBP26.15■■□□□ 1.78
LSM4-201ENST00000252816 DEFB123Q8N688 67 aa26.15■■□□□ 1.78
LSM4-201ENST00000252816 NECAB1Q8N987 351 aa26.15■■□□□ 1.78
LSM4-201ENST00000252816 RNPEPQ9H4A4 650 aa26.15■■□□□ 1.78
LSM4-201ENST00000252816 SLC9A2Q9UBY0 812 aa26.15■■□□□ 1.78
LSM4-201ENST00000252816 ZNF215Q9UL58 517 aaPredicted RBP26.15■■□□□ 1.78
LSM4-201ENST00000252816 SCN5AQ14524 2016 aa26.15■■□□□ 1.78
LSM4-201ENST00000252816 C17orf102A2RUQ5 167 aa26.14■■□□□ 1.78
LSM4-201ENST00000252816 CDKL5O76039 1030 aa26.14■■□□□ 1.78
LSM4-201ENST00000252816 RBL2Q08999 1139 aa26.14■■□□□ 1.78
LSM4-201ENST00000252816 NPY5RQ15761 445 aa26.14■■□□□ 1.78
LSM4-201ENST00000252816 OTOP2Q7RTS6 562 aa26.14■■□□□ 1.78
LSM4-201ENST00000252816 CCDC155Q8N6L0 562 aa26.14■■□□□ 1.78
LSM4-201ENST00000252816 AFAP1L1Q8TED9 768 aa26.14■■□□□ 1.78
LSM4-201ENST00000252816 SDF4Q9BRK5 362 aa26.14■■□□□ 1.78
LSM4-201ENST00000252816 PCDHA4Q9UN74 947 aa26.14■■□□□ 1.78
LSM4-201ENST00000252816 TRIP12Q14669 1992 aaPredicted RBP26.14■■□□□ 1.77
LSM4-201ENST00000252816 CKBP12277 381 aa26.13■■□□□ 1.77
LSM4-201ENST00000252816 GPNMBQ14956 572 aa26.13■■□□□ 1.77
LSM4-201ENST00000252816 SERINC5Q86VE9 423 aa26.13■■□□□ 1.77
LSM4-201ENST00000252816 ATP6V0A1Q93050 837 aa26.13■■□□□ 1.77
LSM4-201ENST00000252816 UIMC1Q96RL1 719 aa26.13■■□□□ 1.77
LSM4-201ENST00000252816 PCYT2Q99447 389 aa26.13■■□□□ 1.77
LSM4-201ENST00000252816 SETD4Q9NVD3 440 aa26.13■■□□□ 1.77
LSM4-201ENST00000252816 TANC1Q9C0D5 1861 aa26.13■■□□□ 1.77
LSM4-201ENST00000252816 STK36Q9NRP7 1315 aa26.13■■□□□ 1.77
LSM4-201ENST00000252816 RBAK-RBAKDNI3L0D1 243 aa26.12■■□□□ 1.77
LSM4-201ENST00000252816 M0R2N6 131 aa26.12■■□□□ 1.77
LSM4-201ENST00000252816 TREHO43280 583 aa26.12■■□□□ 1.77
LSM4-201ENST00000252816 SELPP16109 830 aa26.12■■□□□ 1.77
LSM4-201ENST00000252816 CIITAP33076 1130 aa26.12■■□□□ 1.77
LSM4-201ENST00000252816 RFC2P35250 354 aa26.12■■□□□ 1.77
LSM4-201ENST00000252816 ACTR2P61160 394 aa26.12■■□□□ 1.77
LSM4-201ENST00000252816 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.11■■□□□ 1.77
LSM4-201ENST00000252816 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.11■■□□□ 1.77
LSM4-201ENST00000252816 GRXCR1A8MXD5 290 aa26.11■■□□□ 1.77
LSM4-201ENST00000252816 DHX15O43143 795 aaKnown RBP26.11■■□□□ 1.77
LSM4-201ENST00000252816 LGR5O75473 907 aa26.11■■□□□ 1.77
LSM4-201ENST00000252816 PFKMP08237 780 aa26.11■■□□□ 1.77
LSM4-201ENST00000252816 MARK3P27448 753 aa26.11■■□□□ 1.77
LSM4-201ENST00000252816 TRAF7Q6Q0C0 670 aa26.11■■□□□ 1.77
LSM4-201ENST00000252816 LRRC8DQ7L1W4 858 aa26.11■■□□□ 1.77
LSM4-201ENST00000252816 BLIDQ8IZY5 108 aa26.11■■□□□ 1.77
LSM4-201ENST00000252816 FAM177A1Q8N128 213 aaPredicted RBP26.11■■□□□ 1.77
LSM4-201ENST00000252816 DAGLBQ8NCG7 672 aa26.11■■□□□ 1.77
LSM4-201ENST00000252816 GTF3C6Q969F1 213 aa26.11■■□□□ 1.77
LSM4-201ENST00000252816 KIF2CQ99661 725 aa26.11■■□□□ 1.77
LSM4-201ENST00000252816 KCNJ14Q9UNX9 436 aa26.11■■□□□ 1.77
LSM4-201ENST00000252816 DDX39AO00148 427 aaKnown RBP26.1■■□□□ 1.77
LSM4-201ENST00000252816 CCNE2O96020 404 aa26.1■■□□□ 1.77
LSM4-201ENST00000252816 ADAM17P78536 824 aa26.1■■□□□ 1.77
LSM4-201ENST00000252816 LMBR1Q8WVP7 490 aa26.1■■□□□ 1.77
LSM4-201ENST00000252816 GLG1Q92896 1179 aa26.1■■□□□ 1.77
LSM4-201ENST00000252816 LENG9Q96B70 501 aa26.1■■□□□ 1.77
LSM4-201ENST00000252816 SMARCAD1Q9H4L7 1026 aa26.1■■□□□ 1.77
LSM4-201ENST00000252816 GJB4Q9NTQ9 266 aa26.1■■□□□ 1.77
LSM4-201ENST00000252816 MTMR10Q9NXD2 777 aa26.1■■□□□ 1.77
LSM4-201ENST00000252816 ERAP1Q9NZ08 941 aa26.1■■□□□ 1.77
LSM4-201ENST00000252816 EMSYQ7Z589 1322 aa26.1■■□□□ 1.77
LSM4-201ENST00000252816 IPO5O00410 1097 aaKnown RBP26.09■■□□□ 1.77
LSM4-201ENST00000252816 PRR16Q569H4 304 aa26.09■■□□□ 1.77
LSM4-201ENST00000252816 ZNF618Q5T7W0 954 aa26.09■■□□□ 1.77
LSM4-201ENST00000252816 ORC3Q9UBD5 711 aaPredicted RBP26.09■■□□□ 1.77
LSM4-201ENST00000252816 TET1Q8NFU7 2136 aa26.09■■□□□ 1.77
LSM4-201ENST00000252816 NBNO60934 754 aa26.08■■□□□ 1.77
LSM4-201ENST00000252816 ATG7O95352 703 aa26.08■■□□□ 1.77
LSM4-201ENST00000252816 GNAT1P11488 350 aa26.08■■□□□ 1.77
LSM4-201ENST00000252816 FDPSP14324 419 aaKnown RBP26.08■■□□□ 1.77
LSM4-201ENST00000252816 SETQ01105 290 aaPredicted RBP26.08■■□□□ 1.77
LSM4-201ENST00000252816 ST3GAL1Q11201 340 aa26.08■■□□□ 1.77
LSM4-201ENST00000252816 GALNT17Q6IS24 598 aa26.08■■□□□ 1.77
LSM4-201ENST00000252816 TBCKQ8TEA7 893 aa26.08■■□□□ 1.77
LSM4-201ENST00000252816 ZNF577Q9BSK1 485 aa26.08■■□□□ 1.77
LSM4-201ENST00000252816 PHF20Q9BVI0 1012 aa26.08■■□□□ 1.77
LSM4-201ENST00000252816 FTOQ9C0B1 505 aaKnown RBP eCLIP26.08■■□□□ 1.77
LSM4-201ENST00000252816 MTIF3Q9H2K0 278 aaKnown RBP26.08■■□□□ 1.77
LSM4-201ENST00000252816 THPOP40225 353 aa26.07■■□□□ 1.76
LSM4-201ENST00000252816 USP11P51784 963 aa26.07■■□□□ 1.76
LSM4-201ENST00000252816 MBTPS1Q14703 1052 aa26.07■■□□□ 1.76
LSM4-201ENST00000252816 NSUN7Q8NE18 718 aaKnown RBP26.07■■□□□ 1.76
LSM4-201ENST00000252816 FAM161BQ96MY7 647 aa26.07■■□□□ 1.76
LSM4-201ENST00000252816 NRCAMQ92823 1304 aa26.07■■□□□ 1.76
LSM4-201ENST00000252816 DNAJB2P25686 324 aa26.06■■□□□ 1.76
LSM4-201ENST00000252816 PBX2P40425 430 aa26.06■■□□□ 1.76
LSM4-201ENST00000252816 PPFIA1Q13136 1202 aa26.06■■□□□ 1.76
LSM4-201ENST00000252816 ZNF697Q5TEC3 545 aa26.06■■□□□ 1.76
LSM4-201ENST00000252816 ABHD15Q6UXT9 468 aa26.06■■□□□ 1.76
LSM4-201ENST00000252816 C22orf23Q9BZE7 217 aa26.06■■□□□ 1.76
LSM4-201ENST00000252816 TTYH1Q9H313 450 aaPredicted RBP26.06■■□□□ 1.76
LSM4-201ENST00000252816 AZI2Q9H6S1 392 aa26.06■■□□□ 1.76
LSM4-201ENST00000252816 IGKV6D-21A0A0A0MT36 114 aa26.05■■□□□ 1.76
LSM4-201ENST00000252816 ZBBXA8MT70 800 aa26.05■■□□□ 1.76
LSM4-201ENST00000252816 CXCL10P02778 98 aa26.05■■□□□ 1.76
LSM4-201ENST00000252816 STAT5BP51692 787 aa26.05■■□□□ 1.76
LSM4-201ENST00000252816 GRIK4Q16099 956 aa26.05■■□□□ 1.76
LSM4-201ENST00000252816 PBX4Q9BYU1 374 aa26.05■■□□□ 1.76
LSM4-201ENST00000252816 SEMA6BQ9H3T3 888 aa26.05■■□□□ 1.76
LSM4-201ENST00000252816 TBC1D22BQ9NU19 505 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms