RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 GDAQ9Y2T3 454 aa15.83■□□□□ 0.12
SDF2-201ENST00000247020 BICDL2A1A5D9 508 aa15.82■□□□□ 0.12
SDF2-201ENST00000247020 TESPA1A2RU30 521 aaPredicted RBP15.82■□□□□ 0.12
SDF2-201ENST00000247020 LYPLA2O95372 231 aa15.82■□□□□ 0.12
SDF2-201ENST00000247020 ITGBL1O95965 494 aaPredicted RBP15.82■□□□□ 0.12
SDF2-201ENST00000247020 PTMAP06454 111 aaKnown RBP15.82■□□□□ 0.12
SDF2-201ENST00000247020 P4HBP07237 508 aaKnown RBP15.82■□□□□ 0.12
SDF2-201ENST00000247020 EDNRBP24530 442 aa15.82■□□□□ 0.12
SDF2-201ENST00000247020 ICAM3P32942 547 aa15.82■□□□□ 0.12
SDF2-201ENST00000247020 ALDH5A1P51649 535 aaPredicted RBP15.82■□□□□ 0.12
SDF2-201ENST00000247020 FANCCQ00597 558 aa15.82■□□□□ 0.12
SDF2-201ENST00000247020 ITGB3BPQ13352 177 aaPredicted RBP15.82■□□□□ 0.12
SDF2-201ENST00000247020 SPRYD7Q5W111 196 aa15.82■□□□□ 0.12
SDF2-201ENST00000247020 KLHL10Q6JEL2 608 aa15.82■□□□□ 0.12
SDF2-201ENST00000247020 ZNF746Q6NUN9 644 aaPredicted RBP15.82■□□□□ 0.12
SDF2-201ENST00000247020 SMYD4Q8IYR2 804 aaPredicted RBP15.82■□□□□ 0.12
SDF2-201ENST00000247020 NELFBQ8WX92 580 aa15.82■□□□□ 0.12
SDF2-201ENST00000247020 DYDC2Q96IM9 177 aa15.82■□□□□ 0.12
SDF2-201ENST00000247020 UIMC1Q96RL1 719 aa15.82■□□□□ 0.12
SDF2-201ENST00000247020 MED15Q96RN5 788 aa15.82■□□□□ 0.12
SDF2-201ENST00000247020 NMRK2Q9NPI5 230 aa15.82■□□□□ 0.12
SDF2-201ENST00000247020 CTNND2Q9UQB3 1225 aa15.82■□□□□ 0.12
SDF2-201ENST00000247020 PLXNB2O15031 1838 aa15.81■□□□□ 0.12
SDF2-201ENST00000247020 CCL15-CCL14A0A0B4J2E2 113 aa15.81■□□□□ 0.12
SDF2-201ENST00000247020 POTEB2H3BUK9 544 aa15.81■□□□□ 0.12
SDF2-201ENST00000247020 CHMP2AO43633 222 aa15.81■□□□□ 0.12
SDF2-201ENST00000247020 EIF3JO75822 258 aaKnown RBP15.81■□□□□ 0.12
SDF2-201ENST00000247020 KIF20AO95235 890 aa15.81■□□□□ 0.12
SDF2-201ENST00000247020 ERCC3P19447 782 aa15.81■□□□□ 0.12
SDF2-201ENST00000247020 CCNE1P24864 410 aa15.81■□□□□ 0.12
SDF2-201ENST00000247020 GCLCP48506 637 aaPredicted RBP15.81■□□□□ 0.12
SDF2-201ENST00000247020 ERVK-9P63128 1117 aa15.81■□□□□ 0.12
SDF2-201ENST00000247020 ERVK-24P63145 666 aa15.81■□□□□ 0.12
SDF2-201ENST00000247020 CCNA1P78396 465 aa15.81■□□□□ 0.12
SDF2-201ENST00000247020 SPAG1Q07617 926 aa15.81■□□□□ 0.12
SDF2-201ENST00000247020 CCL15Q16663 113 aa15.81■□□□□ 0.12
SDF2-201ENST00000247020 CDKAL1Q5VV42 579 aa15.81■□□□□ 0.12
SDF2-201ENST00000247020 DYMQ7RTS9 669 aa15.81■□□□□ 0.12
SDF2-201ENST00000247020 GUF1Q8N442 669 aaKnown RBP15.81■□□□□ 0.12
SDF2-201ENST00000247020 FAM133AQ8N9E0 248 aa15.81■□□□□ 0.12
SDF2-201ENST00000247020 NOC3LQ8WTT2 800 aaKnown RBP15.81■□□□□ 0.12
SDF2-201ENST00000247020 CTAGE1Q96RT6 745 aa15.81■□□□□ 0.12
SDF2-201ENST00000247020 WDR64B1ANS9 1081 aa15.8■□□□□ 0.12
SDF2-201ENST00000247020 CYP4A11Q02928 519 aa15.8■□□□□ 0.12
SDF2-201ENST00000247020 STK4Q13043 487 aa15.8■□□□□ 0.12
SDF2-201ENST00000247020 COASYQ13057 564 aa15.8■□□□□ 0.12
SDF2-201ENST00000247020 TPD52L1Q16890 204 aaPredicted RBP15.8■□□□□ 0.12
SDF2-201ENST00000247020 SMAP1Q8IYB5 467 aaPredicted RBP15.8■□□□□ 0.12
SDF2-201ENST00000247020 TRMT44Q8IYL2 757 aaKnown RBP15.8■□□□□ 0.12
SDF2-201ENST00000247020 ZFP91Q96JP5 570 aaPredicted RBP15.8■□□□□ 0.12
SDF2-201ENST00000247020 PURBQ96QR8 312 aaKnown RBP15.8■□□□□ 0.12
SDF2-201ENST00000247020 ZSWIM4Q9H7M6 989 aa15.8■□□□□ 0.12
SDF2-201ENST00000247020 TXNRD2Q9NNW7 524 aa15.8■□□□□ 0.12
SDF2-201ENST00000247020 PANK4Q9NVE7 773 aa15.8■□□□□ 0.12
SDF2-201ENST00000247020 RGL1Q9NZL6 768 aa15.8■□□□□ 0.12
SDF2-201ENST00000247020 PLXNA1Q9UIW2 1896 aa15.8■□□□□ 0.12
SDF2-201ENST00000247020 SRCAPQ6ZRS2 3230 aa15.8■□□□□ 0.12
SDF2-201ENST00000247020 PDHXO00330 501 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 DKC1O60832 514 aaKnown RBP eCLIP15.79■□□□□ 0.12
SDF2-201ENST00000247020 SERPINC1P01008 464 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 SSBP05455 408 aaKnown RBP eCLIP15.79■□□□□ 0.12
SDF2-201ENST00000247020 IDEP14735 1019 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 CDK11BP21127 795 aaKnown RBP15.79■□□□□ 0.12
SDF2-201ENST00000247020 UBASH3AP57075 661 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 PSMC6P62333 389 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 TPH2Q8IWU9 490 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 KIAA0895Q8NCT3 520 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 LXNQ9BS40 222 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 XPO4Q9C0E2 1151 aaKnown RBP15.79■□□□□ 0.12
SDF2-201ENST00000247020 ZCCHC17Q9NP64 241 aaKnown RBP15.79■□□□□ 0.12
SDF2-201ENST00000247020 IFNKQ9P0W0 207 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 IMPACTQ9P2X3 320 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 MORF4L1Q9UBU8 362 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 MYH11P35749 1972 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 DOCK5Q9H7D0 1870 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 DNAJC25-GNG10A0A024R161 153 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 SPATA31C2B4DYI2 1134 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 BTBD19C9JJ37 291 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 RGS20O76081 388 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 KRT18P05783 430 aaKnown RBP15.79■□□□□ 0.12
SDF2-201ENST00000247020 FCER1AP12319 257 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 ATP1A3P13637 1013 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 KCNA2P16389 499 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 QARSP47897 775 aaKnown RBP15.79■□□□□ 0.12
SDF2-201ENST00000247020 GIT2Q14161 759 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 CTTNQ14247 550 aaKnown RBP15.79■□□□□ 0.12
SDF2-201ENST00000247020 KCTD2Q14681 263 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 ARSHQ5FYA8 562 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 FAM26FQ5R3K3 315 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 C4orf19Q8IY42 314 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 DRC7Q8IY82 874 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 ANKRD20A12PQ8NF67 263 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 SMCR8Q8TEV9 937 aaPredicted RBP15.79■□□□□ 0.12
SDF2-201ENST00000247020 BRI3BPQ8WY22 251 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 P2RX5Q93086 422 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 BHMT2Q9H2M3 363 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 THAP9Q9H5L6 903 aa15.79■□□□□ 0.12
SDF2-201ENST00000247020 DBR1Q9UK59 544 aaKnown RBP15.79■□□□□ 0.12
SDF2-201ENST00000247020 ZNF236Q9UL36 1845 aa15.78■□□□□ 0.12
SDF2-201ENST00000247020 ARID2Q68CP9 1835 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms