RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 GDF3Q9NR23 364 aa6.91□□□□□ -1.3
SGIP1-201ENST00000237247 ATP8A1Q9Y2Q0 1164 aa6.91□□□□□ -1.3
SGIP1-201ENST00000237247 ATP6V1G1O75348 118 aa6.91□□□□□ -1.3
SGIP1-201ENST00000237247 CDC25AP30304 524 aa6.91□□□□□ -1.3
SGIP1-201ENST00000237247 GNAQP50148 359 aa6.91□□□□□ -1.3
SGIP1-201ENST00000237247 KIF5AQ12840 1032 aa6.91□□□□□ -1.3
SGIP1-201ENST00000237247 MPP3Q13368 585 aa6.91□□□□□ -1.3
SGIP1-201ENST00000237247 SLC4A8Q2Y0W8 1093 aa6.91□□□□□ -1.3
SGIP1-201ENST00000237247 BLIDQ8IZY5 108 aa6.91□□□□□ -1.3
SGIP1-201ENST00000237247 FUKQ8N0W3 1084 aa6.91□□□□□ -1.3
SGIP1-201ENST00000237247 CACTIN-AS1Q8N1I8 211 aa6.91□□□□□ -1.3
SGIP1-201ENST00000237247 LZICQ8WZA0 190 aa6.91□□□□□ -1.3
SGIP1-201ENST00000237247 TUBGCP2Q9BSJ2 902 aa6.91□□□□□ -1.3
SGIP1-201ENST00000237247 CAPS2Q9BXY5 557 aa6.91□□□□□ -1.3
SGIP1-201ENST00000237247 TCP11L1Q9NUJ3 509 aa6.91□□□□□ -1.3
SGIP1-201ENST00000237247 WDR81Q562E7 1941 aa6.91□□□□□ -1.3
SGIP1-201ENST00000237247 SIP14410 1827 aa6.91□□□□□ -1.3
SGIP1-201ENST00000237247 PDE2AO00408 941 aaPredicted RBP6.91□□□□□ -1.3
SGIP1-201ENST00000237247 VDRP11473 427 aa6.91□□□□□ -1.3
SGIP1-201ENST00000237247 SMARCA1P28370 1054 aa6.91□□□□□ -1.3
SGIP1-201ENST00000237247 PSMC1P62191 440 aaKnown RBP6.91□□□□□ -1.3
SGIP1-201ENST00000237247 ATP2B2Q01814 1243 aa6.91□□□□□ -1.3
SGIP1-201ENST00000237247 SRBD1Q8N5C6 995 aaKnown RBP6.91□□□□□ -1.3
SGIP1-201ENST00000237247 KAT14Q9H8E8 782 aa6.91□□□□□ -1.3
SGIP1-201ENST00000237247 ZWILCHQ9H900 591 aa6.91□□□□□ -1.3
SGIP1-201ENST00000237247 ARPP21Q9UBL0 812 aaPredicted RBP6.91□□□□□ -1.3
SGIP1-201ENST00000237247 TRMT112Q9UI30 125 aaKnown RBP6.91□□□□□ -1.3
SGIP1-201ENST00000237247 SIK3Q9Y2K2 1263 aa6.91□□□□□ -1.3
SGIP1-201ENST00000237247 GDAQ9Y2T3 454 aa6.91□□□□□ -1.3
SGIP1-201ENST00000237247 V9GY48 417 aaPredicted RBP6.91□□□□□ -1.3
SGIP1-201ENST00000237247 GPR75-ASB3A0A0A6YYF3 556 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 FGFR1OPO95684 399 aaKnown RBP6.9□□□□□ -1.3
SGIP1-201ENST00000237247 MYBP10242 640 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 DYNC1I2Q13409 638 aaKnown RBP6.9□□□□□ -1.3
SGIP1-201ENST00000237247 UBE4AQ14139 1066 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 GRM4Q14833 912 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 CLPPQ16740 277 aaPredicted RBP6.9□□□□□ -1.3
SGIP1-201ENST00000237247 ASTE1Q2TB18 679 aaPredicted RBP6.9□□□□□ -1.3
SGIP1-201ENST00000237247 PUS10Q3MIT2 529 aaKnown RBP6.9□□□□□ -1.3
SGIP1-201ENST00000237247 CCDC152Q4G0S7 254 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 CCDC181Q5TID7 509 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 LRIG3Q6UXM1 1119 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 TOM1L2Q6ZVM7 507 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 GET4Q7L5D6 327 aaPredicted RBP6.9□□□□□ -1.3
SGIP1-201ENST00000237247 CCHCR1Q8TD31 782 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 TRIM4Q9C037 500 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 ATP8A2Q9NTI2 1148 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 STIM2Q9P246 746 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 TRIM10Q9UDY6 481 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 G3BP2Q9UN86 482 aaKnown RBP6.9□□□□□ -1.3
SGIP1-201ENST00000237247 FRMD4BQ9Y2L6 1034 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 ASB3Q9Y575 518 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 IDEP14735 1019 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 CASP1P29466 404 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 XRCC4Q13426 336 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 PRPF4BQ13523 1007 aaKnown RBP6.9□□□□□ -1.3
SGIP1-201ENST00000237247 RIPK1Q13546 671 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 HAUS3Q68CZ6 603 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 CENPPQ6IPU0 288 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 DGKHQ86XP1 1220 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 SPATA4Q8NEY3 305 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 BCAS4Q8TDM0 211 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 CNKSR1Q969H4 720 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 PPP1R14BQ96C90 147 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 TRIM47Q96LD4 638 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 ZKSCAN3Q9BRR0 538 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 BLZF1Q9H2G9 400 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 LRRC4BQ9NT99 713 aa6.9□□□□□ -1.3
SGIP1-201ENST00000237247 TPX2Q9ULW0 747 aaKnown RBP6.9□□□□□ -1.3
SGIP1-201ENST00000237247 PVALEFA0A1B0GWK0 134 aa6.9□□□□□ -1.31
SGIP1-201ENST00000237247 FRMD3A2A2Y4 597 aa6.9□□□□□ -1.31
SGIP1-201ENST00000237247 RCCD1A6NED2 376 aa6.9□□□□□ -1.31
SGIP1-201ENST00000237247 CYP7A1P22680 504 aa6.9□□□□□ -1.31
SGIP1-201ENST00000237247 ANXA13P27216 316 aa6.9□□□□□ -1.31
SGIP1-201ENST00000237247 SESN3P58005 492 aa6.9□□□□□ -1.31
SGIP1-201ENST00000237247 SPA17Q15506 151 aa6.9□□□□□ -1.31
SGIP1-201ENST00000237247 CRY2Q49AN0 593 aa6.9□□□□□ -1.31
SGIP1-201ENST00000237247 FKBP15Q5T1M5 1219 aa6.9□□□□□ -1.31
SGIP1-201ENST00000237247 C6orf89Q6UWU4 347 aa6.9□□□□□ -1.31
SGIP1-201ENST00000237247 DTHD1Q6ZMT9 781 aa6.9□□□□□ -1.31
SGIP1-201ENST00000237247 CCDC84Q86UT8 332 aaPredicted RBP6.9□□□□□ -1.31
SGIP1-201ENST00000237247 GBP7Q8N8V2 638 aaPredicted RBP6.9□□□□□ -1.31
SGIP1-201ENST00000237247 ZNF384Q8TF68 577 aa6.9□□□□□ -1.31
SGIP1-201ENST00000237247 CNOT6LQ96LI5 555 aaKnown RBP6.9□□□□□ -1.31
SGIP1-201ENST00000237247 MOV10L1Q9BXT6 1211 aaKnown RBP6.9□□□□□ -1.31
SGIP1-201ENST00000237247 PHACTR1Q9C0D0 580 aa6.9□□□□□ -1.31
SGIP1-201ENST00000237247 LACRTQ9GZZ8 138 aa6.9□□□□□ -1.31
SGIP1-201ENST00000237247 HDAC6Q9UBN7 1215 aa6.9□□□□□ -1.31
SGIP1-201ENST00000237247 ITGB1BP2Q9UKP3 347 aa6.9□□□□□ -1.31
SGIP1-201ENST00000237247 C15orf41Q9Y2V0 281 aa6.9□□□□□ -1.31
SGIP1-201ENST00000237247 NPTXRO95502 500 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 TFRCP02786 760 aaKnown RBP6.89□□□□□ -1.31
SGIP1-201ENST00000237247 IDO1P14902 403 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 PSMC4P43686 418 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 PMS1P54277 932 aaKnown RBP6.89□□□□□ -1.31
SGIP1-201ENST00000237247 NLRP5P59047 1200 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 PHEXP78562 749 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 LRRC63Q05C16 580 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 SPDYCQ5MJ68 293 aa6.89□□□□□ -1.31
SGIP1-201ENST00000237247 C15orf52Q6ZUT6 534 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms