RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 TMC4Q7Z404 712 aa17.13■□□□□ 0.33
CTSD-201ENST00000236671 FGFBP2Q9BYJ0 223 aa17.13■□□□□ 0.33
CTSD-201ENST00000236671 TRIM34Q9BYJ4 488 aa17.13■□□□□ 0.33
CTSD-201ENST00000236671 TMX4Q9H1E5 349 aaPredicted RBP17.13■□□□□ 0.33
CTSD-201ENST00000236671 JMJD4Q9H9V9 463 aa17.13■□□□□ 0.33
CTSD-201ENST00000236671 NLRC4Q9NPP4 1024 aa17.13■□□□□ 0.33
CTSD-201ENST00000236671 PODXL2Q9NZ53 605 aa17.13■□□□□ 0.33
CTSD-201ENST00000236671 PPIP5K2O43314 1243 aa17.12■□□□□ 0.33
CTSD-201ENST00000236671 GABPAQ06546 454 aa17.12■□□□□ 0.33
CTSD-201ENST00000236671 SLC9C1Q4G0N8 1177 aa17.12■□□□□ 0.33
CTSD-201ENST00000236671 FAM26FQ5R3K3 315 aa17.12■□□□□ 0.33
CTSD-201ENST00000236671 FAM83BQ5T0W9 1011 aa17.12■□□□□ 0.33
CTSD-201ENST00000236671 CLEC10AQ8IUN9 316 aa17.12■□□□□ 0.33
CTSD-201ENST00000236671 RTKN2Q8IZC4 609 aa17.12■□□□□ 0.33
CTSD-201ENST00000236671 CAVIN3Q969G5 261 aa17.12■□□□□ 0.33
CTSD-201ENST00000236671 GPCPD1Q9NPB8 672 aa17.12■□□□□ 0.33
CTSD-201ENST00000236671 DDX25Q9UHL0 483 aaKnown RBP17.12■□□□□ 0.33
CTSD-201ENST00000236671 TSKSQ9UJT2 592 aa17.12■□□□□ 0.33
CTSD-201ENST00000236671 PNMA6FA0A0J9YX94 578 aa17.12■□□□□ 0.33
CTSD-201ENST00000236671 TRAF5O00463 557 aa17.12■□□□□ 0.33
CTSD-201ENST00000236671 SERPING1P05155 500 aa17.12■□□□□ 0.33
CTSD-201ENST00000236671 AKR1B1P15121 316 aa17.12■□□□□ 0.33
CTSD-201ENST00000236671 PAFAH1B1P43034 410 aa17.12■□□□□ 0.33
CTSD-201ENST00000236671 CCDC40Q4G0X9 1142 aa17.12■□□□□ 0.33
CTSD-201ENST00000236671 SFMBT2Q5VUG0 894 aa17.12■□□□□ 0.33
CTSD-201ENST00000236671 C8orf74Q6P047 294 aa17.12■□□□□ 0.33
CTSD-201ENST00000236671 TSEN2Q8NCE0 465 aaKnown RBP17.12■□□□□ 0.33
CTSD-201ENST00000236671 GJA10Q969M2 543 aa17.12■□□□□ 0.33
CTSD-201ENST00000236671 LSM14BQ9BX40 385 aaKnown RBP17.12■□□□□ 0.33
CTSD-201ENST00000236671 NUCKS1Q9H1E3 243 aaKnown RBP17.12■□□□□ 0.33
CTSD-201ENST00000236671 PANK4Q9NVE7 773 aa17.12■□□□□ 0.33
CTSD-201ENST00000236671 DICER1Q9UPY3 1922 aaKnown RBP17.11■□□□□ 0.33
CTSD-201ENST00000236671 ATP2B4P23634 1241 aa17.11■□□□□ 0.33
CTSD-201ENST00000236671 EIF6P56537 245 aaKnown RBP17.11■□□□□ 0.33
CTSD-201ENST00000236671 HYIQ5T013 277 aa17.11■□□□□ 0.33
CTSD-201ENST00000236671 SLF2Q8IX21 1173 aa17.11■□□□□ 0.33
CTSD-201ENST00000236671 MS4A14Q96JA4 679 aa17.11■□□□□ 0.33
CTSD-201ENST00000236671 CEP63Q96MT8 703 aa17.11■□□□□ 0.33
CTSD-201ENST00000236671 PCDHA2Q9Y5H9 948 aa17.11■□□□□ 0.33
CTSD-201ENST00000236671 GOLGA8KD6RF30 607 aa17.11■□□□□ 0.33
CTSD-201ENST00000236671 MARSP56192 900 aaKnown RBP17.11■□□□□ 0.33
CTSD-201ENST00000236671 ZNF543Q08ER8 600 aa17.11■□□□□ 0.33
CTSD-201ENST00000236671 GLE1Q53GS7 698 aaKnown RBP17.11■□□□□ 0.33
CTSD-201ENST00000236671 TRIM59Q8IWR1 403 aa17.11■□□□□ 0.33
CTSD-201ENST00000236671 ADGRF4Q8IZF3 695 aa17.11■□□□□ 0.33
CTSD-201ENST00000236671 PSMD1Q99460 953 aa17.11■□□□□ 0.33
CTSD-201ENST00000236671 RNF181Q9P0P0 153 aa17.11■□□□□ 0.33
CTSD-201ENST00000236671 DAGLAQ9Y4D2 1042 aa17.11■□□□□ 0.33
CTSD-201ENST00000236671 YDJCA8MPS7 323 aa17.1■□□□□ 0.33
CTSD-201ENST00000236671 EPB41P11171 864 aaKnown RBP17.1■□□□□ 0.33
CTSD-201ENST00000236671 CORO7P57737 925 aa17.1■□□□□ 0.33
CTSD-201ENST00000236671 POLR2FP61218 127 aaKnown RBP17.1■□□□□ 0.33
CTSD-201ENST00000236671 PPFIA1Q13136 1202 aa17.1■□□□□ 0.33
CTSD-201ENST00000236671 NAB2Q15742 525 aa17.1■□□□□ 0.33
CTSD-201ENST00000236671 CFAP221Q4G0U5 840 aa17.1■□□□□ 0.33
CTSD-201ENST00000236671 LARGE2Q8N3Y3 721 aa17.1■□□□□ 0.33
CTSD-201ENST00000236671 BBXQ8WY36 941 aaPredicted RBP17.1■□□□□ 0.33
CTSD-201ENST00000236671 RNF14Q9UBS8 474 aa17.1■□□□□ 0.33
CTSD-201ENST00000236671 KDM3AQ9Y4C1 1321 aa17.1■□□□□ 0.33
CTSD-201ENST00000236671 GNA14O95837 355 aa17.09■□□□□ 0.33
CTSD-201ENST00000236671 IRAK1P51617 712 aa17.09■□□□□ 0.33
CTSD-201ENST00000236671 APBA1Q02410 837 aa17.09■□□□□ 0.33
CTSD-201ENST00000236671 NNTQ13423 1086 aa17.09■□□□□ 0.33
CTSD-201ENST00000236671 C9orf131Q5VYM1 1079 aa17.09■□□□□ 0.33
CTSD-201ENST00000236671 ALS2CLQ60I27 953 aa17.09■□□□□ 0.33
CTSD-201ENST00000236671 CUL5Q93034 780 aa17.09■□□□□ 0.33
CTSD-201ENST00000236671 MXD3Q9BW11 206 aa17.09■□□□□ 0.33
CTSD-201ENST00000236671 TBC1D7Q9P0N9 293 aa17.09■□□□□ 0.33
CTSD-201ENST00000236671 MYH7BA7E2Y1 1941 aa17.09■□□□□ 0.33
CTSD-201ENST00000236671 OPA1O60313 960 aa17.09■□□□□ 0.33
CTSD-201ENST00000236671 PALMO75781 387 aa17.09■□□□□ 0.33
CTSD-201ENST00000236671 TTLL1O95922 423 aa17.09■□□□□ 0.33
CTSD-201ENST00000236671 GCFC2P16383 781 aaKnown RBP17.09■□□□□ 0.33
CTSD-201ENST00000236671 NAP1L1P55209 391 aaKnown RBP17.09■□□□□ 0.33
CTSD-201ENST00000236671 PICALMQ13492 652 aa17.09■□□□□ 0.33
CTSD-201ENST00000236671 SLC18A3Q16572 532 aa17.09■□□□□ 0.33
CTSD-201ENST00000236671 TTBK2Q6IQ55 1244 aa17.09■□□□□ 0.33
CTSD-201ENST00000236671 ZC3H3Q8IXZ2 948 aaKnown RBP17.09■□□□□ 0.33
CTSD-201ENST00000236671 TBC1D22AQ8WUA7 517 aa17.09■□□□□ 0.33
CTSD-201ENST00000236671 NT5C3AQ9H0P0 336 aa17.09■□□□□ 0.33
CTSD-201ENST00000236671 GDF3Q9NR23 364 aa17.09■□□□□ 0.33
CTSD-201ENST00000236671 PCDHA12Q9UN75 941 aa17.09■□□□□ 0.33
CTSD-201ENST00000236671 PCDHGC5Q9Y5F6 944 aa17.09■□□□□ 0.33
CTSD-201ENST00000236671 GRIN2DO15399 1336 aa17.08■□□□□ 0.33
CTSD-201ENST00000236671 E9PMD0 336 aa17.08■□□□□ 0.33
CTSD-201ENST00000236671 SSBP05455 408 aaKnown RBP eCLIP17.08■□□□□ 0.33
CTSD-201ENST00000236671 GLI1P08151 1106 aa17.08■□□□□ 0.33
CTSD-201ENST00000236671 KLRC1P26715 233 aa17.08■□□□□ 0.33
CTSD-201ENST00000236671 MAGEA9P43362 315 aa17.08■□□□□ 0.33
CTSD-201ENST00000236671 TTMPQ5BVD1 217 aa17.08■□□□□ 0.33
CTSD-201ENST00000236671 GBP6Q6ZN66 633 aa17.08■□□□□ 0.33
CTSD-201ENST00000236671 NELFCDQ8IXH7 590 aa17.08■□□□□ 0.33
CTSD-201ENST00000236671 SCFD1Q8WVM8 642 aa17.08■□□□□ 0.33
CTSD-201ENST00000236671 TBC1D5Q92609 795 aa17.08■□□□□ 0.33
CTSD-201ENST00000236671 ZC3H12CQ9C0D7 883 aaKnown RBP17.08■□□□□ 0.33
CTSD-201ENST00000236671 KCTD10Q9H3F6 313 aa17.08■□□□□ 0.33
CTSD-201ENST00000236671 KANSL2Q9H9L4 492 aa17.08■□□□□ 0.33
CTSD-201ENST00000236671 LUC7LQ9NQ29 371 aaKnown RBP17.08■□□□□ 0.33
CTSD-201ENST00000236671 BMP2KQ9NSY1 1161 aaPredicted RBP17.08■□□□□ 0.33
CTSD-201ENST00000236671 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms