RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 LDHAP00338 332 aaKnown RBP6.22□□□□□ -1.41
RFX4-201ENST00000229387 HSPA8P11142 646 aaKnown RBP6.22□□□□□ -1.41
RFX4-201ENST00000229387 SP100P23497 879 aaPredicted RBP6.22□□□□□ -1.41
RFX4-201ENST00000229387 MATR3P43243 847 aaKnown RBP eCLIP6.22□□□□□ -1.41
RFX4-201ENST00000229387 ZAP70P43403 619 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 POLE2P56282 527 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 TUBA1BP68363 451 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 FOXK1P85037 733 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 PDE1BQ01064 536 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 KCNH2Q12809 1159 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 SUZ12Q15022 739 aaKnown RBP6.22□□□□□ -1.41
RFX4-201ENST00000229387 SLC44A4Q53GD3 710 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 BOLA3Q53S33 107 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 IFFO2Q5TF58 517 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 TUBA1AQ71U36 451 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 TTC6Q86TZ1 520 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 NOP9Q86U38 636 aaKnown RBP6.22□□□□□ -1.41
RFX4-201ENST00000229387 PTPRN2Q92932 1015 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 SETDB2Q96T68 719 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 HNRNPABQ99729 332 aaKnown RBP6.22□□□□□ -1.41
RFX4-201ENST00000229387 CCDC28BQ9BUN5 200 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 GREM2Q9H772 168 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 COPRSQ9NQ92 184 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 COMMD8Q9NX08 183 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 C6orf203Q9P0P8 240 aaPredicted RBP6.22□□□□□ -1.41
RFX4-201ENST00000229387 GOLGA6L10A0A0M3HER8 536 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 CTAGE15A4D2H0 777 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 CTAGE8P0CG41 777 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 USP46P62068 366 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 LSAMPQ13449 338 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 PPP4R3AQ6IN85 833 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 KANK3Q6NY19 840 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 LDHAL6AQ6ZMR3 332 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 C11orf57Q6ZUT1 292 aaPredicted RBP6.22□□□□□ -1.41
RFX4-201ENST00000229387 CTAGE6Q86UF2 777 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 C11orf74Q86VG3 221 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 TMEM139Q8IV31 216 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 CTAGE4Q8IX94 777 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 AGAP11Q8TF27 550 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 IFT81Q8WYA0 676 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 SLC4A9Q96Q91 983 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 CTAGE1Q96RT6 745 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 SYT15Q9BQS2 421 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 CNNM1Q9NRU3 951 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 TRMT112Q9UI30 125 aaKnown RBP6.22□□□□□ -1.41
RFX4-201ENST00000229387 PCDHB2Q9Y5E7 798 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 COMMD10Q9Y6G5 202 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 AOX1Q06278 1338 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 PCDH11XQ9BZA7 1347 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 PCDH11YQ9BZA8 1340 aa6.22□□□□□ -1.41
RFX4-201ENST00000229387 MARF1Q9Y4F3 1742 aaKnown RBP6.22□□□□□ -1.41
RFX4-201ENST00000229387 TTC34A8MYJ7 566 aa6.21□□□□□ -1.41
RFX4-201ENST00000229387 CYTH3O43739 400 aa6.21□□□□□ -1.41
RFX4-201ENST00000229387 STX10O60499 249 aa6.21□□□□□ -1.41
RFX4-201ENST00000229387 TGFB3P10600 412 aa6.21□□□□□ -1.41
RFX4-201ENST00000229387 PORP16435 677 aaPredicted RBP6.21□□□□□ -1.41
RFX4-201ENST00000229387 USP14P54578 494 aa6.21□□□□□ -1.41
RFX4-201ENST00000229387 CASP7P55210 303 aa6.21□□□□□ -1.41
RFX4-201ENST00000229387 MRPS25P82663 173 aaKnown RBP6.21□□□□□ -1.41
RFX4-201ENST00000229387 SPIDRQ14159 915 aa6.21□□□□□ -1.41
RFX4-201ENST00000229387 METTL24Q5JXM2 366 aa6.21□□□□□ -1.41
RFX4-201ENST00000229387 TTC39AQ5SRH9 613 aa6.21□□□□□ -1.41
RFX4-201ENST00000229387 RAVER1Q8IY67 606 aaKnown RBP6.21□□□□□ -1.41
RFX4-201ENST00000229387 ESX1Q8N693 406 aa6.21□□□□□ -1.41
RFX4-201ENST00000229387 CCDC148Q8NFR7 591 aa6.21□□□□□ -1.41
RFX4-201ENST00000229387 NKX2-3Q8TAU0 364 aa6.21□□□□□ -1.41
RFX4-201ENST00000229387 CCT6BQ92526 530 aa6.21□□□□□ -1.41
RFX4-201ENST00000229387 OSBP2Q969R2 916 aa6.21□□□□□ -1.41
RFX4-201ENST00000229387 RPGRIP1Q96KN7 1286 aa6.21□□□□□ -1.41
RFX4-201ENST00000229387 MIS12Q9H081 205 aa6.21□□□□□ -1.41
RFX4-201ENST00000229387 JAG2Q9Y219 1238 aa6.21□□□□□ -1.41
RFX4-201ENST00000229387 COL4A3BPQ9Y5P4 624 aa6.21□□□□□ -1.41
RFX4-201ENST00000229387 COMMD3-BMI1R4GMX3 469 aa6.21□□□□□ -1.41
RFX4-201ENST00000229387 KDM4FA0A1W2PPD8 638 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 FAM25EA8MYX2 175 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 EYA2O00167 538 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 LILRB3O75022 631 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 TBCAO75347 108 aaKnown RBP6.21□□□□□ -1.42
RFX4-201ENST00000229387 SUPT3HO75486 399 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 WFS1O76024 890 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 FGFR1OPO95684 399 aaKnown RBP6.21□□□□□ -1.42
RFX4-201ENST00000229387 ATP6V1C1P21283 382 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 RPS6KB1P23443 525 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 CDC25CP30307 473 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 ACADVLP49748 655 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 GUCY2FP51841 1108 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 MTTPP55157 894 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 POU5F1Q01860 360 aaKnown RBP6.21□□□□□ -1.42
RFX4-201ENST00000229387 SAFBQ15424 915 aaKnown RBP eCLIP6.21□□□□□ -1.42
RFX4-201ENST00000229387 MCMDC2Q4G0Z9 681 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 SLC2A7Q6PXP3 512 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 CFAP61Q8NHU2 1237 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 CCDC12Q8WUD4 166 aaPredicted RBP6.21□□□□□ -1.42
RFX4-201ENST00000229387 RIN2Q8WYP3 895 aaPredicted RBP6.21□□□□□ -1.42
RFX4-201ENST00000229387 ZNF609O15014 1411 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 TNS3Q68CZ2 1445 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 IQCA1LA6NCM1 817 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 USP17L3A6NCW0 530 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 USP17L4A6NCW7 530 aa6.21□□□□□ -1.42
RFX4-201ENST00000229387 SKIP12755 728 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms