RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 KRT76Q01546 638 aa26.69■■□□□ 1.86
HOMER3-201ENST00000221222 ZNF746Q6NUN9 644 aaPredicted RBP26.69■■□□□ 1.86
HOMER3-201ENST00000221222 GJA10Q969M2 543 aa26.69■■□□□ 1.86
HOMER3-201ENST00000221222 TEKT3Q9BXF9 490 aa26.69■■□□□ 1.86
HOMER3-201ENST00000221222 TMEM60Q9H2L4 133 aa26.69■■□□□ 1.86
HOMER3-201ENST00000221222 ELP1O95163 1332 aa26.68■■□□□ 1.86
HOMER3-201ENST00000221222 DDX39AO00148 427 aaKnown RBP26.68■■□□□ 1.86
HOMER3-201ENST00000221222 BAG4O95429 457 aaKnown RBP26.68■■□□□ 1.86
HOMER3-201ENST00000221222 CCNE2O96020 404 aa26.68■■□□□ 1.86
HOMER3-201ENST00000221222 COL6A1P12109 1028 aa26.68■■□□□ 1.86
HOMER3-201ENST00000221222 SP4Q02446 784 aa26.68■■□□□ 1.86
HOMER3-201ENST00000221222 B3GNT9Q6UX72 402 aa26.68■■□□□ 1.86
HOMER3-201ENST00000221222 C7orf61Q8IZ16 206 aa26.68■■□□□ 1.86
HOMER3-201ENST00000221222 C4orf32Q8N8J7 132 aa26.68■■□□□ 1.86
HOMER3-201ENST00000221222 SEPT1Q8WYJ6 367 aa26.68■■□□□ 1.86
HOMER3-201ENST00000221222 GSTTP1A0A1W2PQM5 241 aa26.67■■□□□ 1.86
HOMER3-201ENST00000221222 ATG7O95352 703 aa26.67■■□□□ 1.86
HOMER3-201ENST00000221222 ACTR2P61160 394 aa26.67■■□□□ 1.86
HOMER3-201ENST00000221222 PURAQ00577 322 aaKnown RBP26.67■■□□□ 1.86
HOMER3-201ENST00000221222 C11orf49Q9H6J7 331 aa26.67■■□□□ 1.86
HOMER3-201ENST00000221222 TCEAL9Q9UHQ7 104 aa26.67■■□□□ 1.86
HOMER3-201ENST00000221222 ZDHHC9Q9Y397 364 aa26.67■■□□□ 1.86
HOMER3-201ENST00000221222 SCN10AQ9Y5Y9 1956 aa26.66■■□□□ 1.86
HOMER3-201ENST00000221222 LAD1O00515 517 aa26.66■■□□□ 1.86
HOMER3-201ENST00000221222 MARCH6O60337 910 aa26.66■■□□□ 1.86
HOMER3-201ENST00000221222 CABYRO75952 493 aa26.66■■□□□ 1.86
HOMER3-201ENST00000221222 TCF7P36402 384 aaPredicted RBP26.66■■□□□ 1.86
HOMER3-201ENST00000221222 SMAP1Q8IYB5 467 aaPredicted RBP26.66■■□□□ 1.86
HOMER3-201ENST00000221222 VAV3Q9UKW4 847 aa26.66■■□□□ 1.86
HOMER3-201ENST00000221222 WDR81Q562E7 1941 aa26.65■■□□□ 1.86
HOMER3-201ENST00000221222 A0A1W2PQ45 241 aaPredicted RBP26.65■■□□□ 1.86
HOMER3-201ENST00000221222 A0A1W2PQY0 241 aa26.65■■□□□ 1.86
HOMER3-201ENST00000221222 MYL3P08590 195 aa26.65■■□□□ 1.86
HOMER3-201ENST00000221222 OR52Z1P0C646 297 aa26.65■■□□□ 1.86
HOMER3-201ENST00000221222 PTGDRQ13258 359 aa26.65■■□□□ 1.86
HOMER3-201ENST00000221222 PPP2R5CQ13362 524 aa26.65■■□□□ 1.86
HOMER3-201ENST00000221222 FOXD4L5Q5VV16 416 aaPredicted RBP26.65■■□□□ 1.86
HOMER3-201ENST00000221222 FAM173BQ6P4H8 233 aa26.65■■□□□ 1.86
HOMER3-201ENST00000221222 CXCL17Q6UXB2 119 aa26.65■■□□□ 1.86
HOMER3-201ENST00000221222 FOXD4L4Q8WXT5 416 aaPredicted RBP26.65■■□□□ 1.86
HOMER3-201ENST00000221222 UNC45AQ9H3U1 944 aa26.65■■□□□ 1.86
HOMER3-201ENST00000221222 ZMYND8Q9ULU4 1186 aaPredicted RBP26.65■■□□□ 1.86
HOMER3-201ENST00000221222 LGALS2P05162 132 aa26.64■■□□□ 1.86
HOMER3-201ENST00000221222 ABHD15Q6UXT9 468 aa26.64■■□□□ 1.86
HOMER3-201ENST00000221222 GLT1D1Q96MS3 346 aa26.64■■□□□ 1.86
HOMER3-201ENST00000221222 MTG1Q9BT17 334 aaPredicted RBP26.64■■□□□ 1.86
HOMER3-201ENST00000221222 PCDHA12Q9UN75 941 aa26.64■■□□□ 1.86
HOMER3-201ENST00000221222 RANBP2P49792 3224 aaKnown RBP26.64■■□□□ 1.85
HOMER3-201ENST00000221222 EMSYQ7Z589 1322 aa26.63■■□□□ 1.85
HOMER3-201ENST00000221222 IGKV6D-21A0A0A0MT36 114 aa26.63■■□□□ 1.85
HOMER3-201ENST00000221222 WDR64B1ANS9 1081 aa26.63■■□□□ 1.85
HOMER3-201ENST00000221222 BMP15O95972 392 aa26.63■■□□□ 1.85
HOMER3-201ENST00000221222 F2P00734 622 aa26.63■■□□□ 1.85
HOMER3-201ENST00000221222 SFNP31947 248 aa26.63■■□□□ 1.85
HOMER3-201ENST00000221222 JAK3P52333 1124 aa26.63■■□□□ 1.85
HOMER3-201ENST00000221222 ATP2C1P98194 919 aaPredicted RBP26.63■■□□□ 1.85
HOMER3-201ENST00000221222 SPIRE1Q08AE8 756 aa26.63■■□□□ 1.85
HOMER3-201ENST00000221222 RDM1Q8NG50 284 aa26.63■■□□□ 1.85
HOMER3-201ENST00000221222 C16orf70Q9BSU1 422 aa26.63■■□□□ 1.85
HOMER3-201ENST00000221222 PRO3102Q9H379 93 aa26.63■■□□□ 1.85
HOMER3-201ENST00000221222 TTC12Q9H892 705 aaPredicted RBP26.63■■□□□ 1.85
HOMER3-201ENST00000221222 LGR5O75473 907 aa26.62■■□□□ 1.85
HOMER3-201ENST00000221222 ZNF286BP0CG31 522 aa26.62■■□□□ 1.85
HOMER3-201ENST00000221222 PRPHP41219 470 aa26.62■■□□□ 1.85
HOMER3-201ENST00000221222 TXKP42681 527 aa26.62■■□□□ 1.85
HOMER3-201ENST00000221222 NUCB2P80303 420 aa26.62■■□□□ 1.85
HOMER3-201ENST00000221222 KAT2BQ92831 832 aa26.62■■□□□ 1.85
HOMER3-201ENST00000221222 FERMT2Q96AC1 680 aa26.62■■□□□ 1.85
HOMER3-201ENST00000221222 PCDHA10Q9Y5I2 948 aa26.62■■□□□ 1.85
HOMER3-201ENST00000221222 SUPT20HL2P0C7V6 817 aa26.61■■□□□ 1.85
HOMER3-201ENST00000221222 MIS18BP1Q6P0N0 1132 aa26.61■■□□□ 1.85
HOMER3-201ENST00000221222 PCYT2Q99447 389 aa26.61■■□□□ 1.85
HOMER3-201ENST00000221222 SENP6Q9GZR1 1112 aaPredicted RBP26.61■■□□□ 1.85
HOMER3-201ENST00000221222 DISC1Q9NRI5 854 aa26.61■■□□□ 1.85
HOMER3-201ENST00000221222 CEP131Q9UPN4 1083 aa26.61■■□□□ 1.85
HOMER3-201ENST00000221222 CHMP2AO43633 222 aa26.6■■□□□ 1.85
HOMER3-201ENST00000221222 SYN1P17600 705 aa26.6■■□□□ 1.85
HOMER3-201ENST00000221222 SF3A1Q15459 793 aaKnown RBP26.6■■□□□ 1.85
HOMER3-201ENST00000221222 KATNAL1Q9BW62 490 aa26.6■■□□□ 1.85
HOMER3-201ENST00000221222 STARD7Q9NQZ5 370 aa26.6■■□□□ 1.85
HOMER3-201ENST00000221222 MYH9P35579 1960 aaKnown RBP26.6■■□□□ 1.85
HOMER3-201ENST00000221222 HAS3O00219 553 aa26.59■■□□□ 1.85
HOMER3-201ENST00000221222 PSAPP07602 524 aa26.59■■□□□ 1.85
HOMER3-201ENST00000221222 UTP14CQ5TAP6 766 aaKnown RBP26.59■■□□□ 1.85
HOMER3-201ENST00000221222 ARL6IP4Q66PJ3 421 aaKnown RBP26.59■■□□□ 1.85
HOMER3-201ENST00000221222 PLPPR4Q7Z2D5 763 aa26.59■■□□□ 1.85
HOMER3-201ENST00000221222 MIER3Q7Z3K6 550 aa26.59■■□□□ 1.85
HOMER3-201ENST00000221222 TRIM50Q86XT4 487 aa26.59■■□□□ 1.85
HOMER3-201ENST00000221222 AFAP1L1Q8TED9 768 aa26.59■■□□□ 1.85
HOMER3-201ENST00000221222 ZNF396Q96N95 335 aaPredicted RBP26.59■■□□□ 1.85
HOMER3-201ENST00000221222 IPO9Q96P70 1041 aaKnown RBP26.59■■□□□ 1.85
HOMER3-201ENST00000221222 USP28Q96RU2 1077 aa26.59■■□□□ 1.85
HOMER3-201ENST00000221222 FTOQ9C0B1 505 aaKnown RBP eCLIP26.59■■□□□ 1.85
HOMER3-201ENST00000221222 SMARCAD1Q9H4L7 1026 aa26.59■■□□□ 1.85
HOMER3-201ENST00000221222 CIZ1Q9ULV3 898 aaPredicted RBP26.59■■□□□ 1.85
HOMER3-201ENST00000221222 SAMM50Q9Y512 469 aa26.59■■□□□ 1.85
HOMER3-201ENST00000221222 CLIC4Q9Y696 253 aa26.59■■□□□ 1.85
HOMER3-201ENST00000221222 H3BRB1 525 aa26.58■■□□□ 1.85
HOMER3-201ENST00000221222 EML1O00423 815 aa26.58■■□□□ 1.85
HOMER3-201ENST00000221222 FXR2P51116 673 aaKnown RBP eCLIP26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms