RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 PAGE5Q96GU1 130 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 KIF2CQ99661 725 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 UPF3AQ9H1J1 476 aaKnown RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 DIP2CQ9Y2E4 1556 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 EXOC1LA0A1B0GW35 172 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 SLC16A3O15427 465 aaKnown RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 CHMP2AO43633 222 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 PAMP19021 973 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 TBXAS1P24557 533 aaPredicted RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 NFKBIAP25963 317 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 DPP8Q6V1X1 898 aaPredicted RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 EP400NLQ6ZTU2 488 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 GAS2L3Q86XJ1 694 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 DGKHQ86XP1 1220 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 CTAGE3PQ8IX95 158 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 NDST4Q9H3R1 872 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 DBNLQ9UJU6 430 aaKnown RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 USP31Q70CQ4 1352 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 MYH1P12882 1939 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 MYH4Q9Y623 1939 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 ARHGAP10A1A4S6 786 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 CPP00450 1065 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 KRT16P08779 473 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 AP2B1P63010 937 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 KRT31Q15323 416 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 MMEL1Q495T6 779 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 MFSD14BQ5SR56 506 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 BBS5Q8N3I7 341 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 RIBC1Q8N443 379 aaPredicted RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 MB21D1Q8N884 522 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 CFAP61Q8NHU2 1237 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 HNRNPLLQ8WVV9 542 aaKnown RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 KANSL2Q9H9L4 492 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 NRBP2Q9NSY0 501 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 DDX56Q9NY93 547 aaKnown RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 ADAM21Q9UKJ8 722 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 MYH11P35749 1972 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 ABCB11O95342 1321 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 BAZ2BQ9UIF8 2168 aaKnown RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 TMEM232C9JQI7 657 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 AP3M2P53677 418 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 CHRNA2Q15822 529 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 MIS18BP1Q6P0N0 1132 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 CRLF3Q8IUI8 442 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 FAM186BQ8IYM0 893 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 BANK1Q8NDB2 785 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.76□□□□□ -1.65
CHD9-201ENST00000219084 KLHL29Q96CT2 875 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 NLRC4Q9NPP4 1024 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 PTPRUQ92729 1446 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 SHPRHQ149N8 1683 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 GUCY2CP25092 1073 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 RWDD2BP57060 319 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 ILF2Q12905 390 aaKnown RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 MYO1EQ12965 1108 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 LRRC23Q53EV4 343 aaPredicted RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 PRR16Q569H4 304 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 NAALADL2Q58DX5 795 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 ZNF449Q6P9G9 518 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 DYMQ7RTS9 669 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 PDIK1LQ8N165 341 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 TGFBRAP1Q8WUH2 860 aa4.76□□□□□ -1.65
CHD9-201ENST00000219084 ZNF512BQ96KM6 892 aaPredicted RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.76□□□□□ -1.652e-7■■■■□ 20.1
CHD9-201ENST00000219084 TAF1DQ9H5J8 278 aaPredicted RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 SAP30BPQ9UHR5 308 aaKnown RBP4.76□□□□□ -1.65
CHD9-201ENST00000219084 A0A1W2PQJ5 194 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 BTBD18B2RXH4 712 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 H0YIN7 160 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 GOLGA8MH3BSY2 632 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 CCND2P30279 289 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 CYP2J2P51589 502 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 RASIP1Q5U651 963 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 TRIM68Q6AZZ1 485 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 ARMCX5Q6P1M9 558 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 CLEC4GQ6UXB4 293 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 SYN2Q92777 582 aaPredicted RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 ALKBH8Q96BT7 664 aaKnown RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 ZNF496Q96IT1 587 aaPredicted RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 ZHX2Q9Y6X8 837 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 GOLGA8TH3BQL2 631 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 TXNDC9O14530 226 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 KRT38O76015 456 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 SASH1O94885 1247 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 CYP21A2P08686 494 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 GOLGA8HP0CJ92 632 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 PPP2R2AP63151 447 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 IL17REQ8NFR9 667 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 POMGNT1Q8WZA1 660 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 ADD3Q9UEY8 706 aaKnown RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 SERPINA10Q9UK55 444 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 CCNL1Q9UK58 526 aaPredicted RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 CPDO75976 1380 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 ZNF804BA4D1E1 1349 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 OVOS2A0A0J9YW53 1432 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 OVOS2Q6IE36 1432 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 SGK1O00141 431 aa4.75□□□□□ -1.65
CHD9-201ENST00000219084 CTIFO43310 598 aaKnown RBP4.75□□□□□ -1.65
CHD9-201ENST00000219084 ADAMTS2O95450 1211 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms