RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 TRIM34Q9BYJ4 488 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 MYH7BA7E2Y1 1941 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 A0A087X0T9 212 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 USP17L10C9JJH3 530 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 CETN3O15182 167 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 EIF3HO15372 352 aaKnown RBP eCLIP14.63□□□□□ -0.074e-6■■■■■ 29.2
SRP54-201ENST00000216774 GLI1P08151 1106 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 FAM228BP0C875 321 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 HOXA10P31260 410 aaPredicted RBP14.63□□□□□ -0.07
SRP54-201ENST00000216774 MRPS25P82663 173 aaKnown RBP14.63□□□□□ -0.07
SRP54-201ENST00000216774 SKOR1P84550 965 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 ADAM9Q13443 819 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 KIAA0753Q2KHM9 967 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 TTBK2Q6IQ55 1244 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 MOXD1Q6UVY6 613 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 TMC4Q7Z404 712 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 SLFN12Q8IYM2 578 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.63□□□□□ -0.07
SRP54-201ENST00000216774 MBOAT7Q96N66 472 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 INPP4AQ96PE3 977 aaPredicted RBP14.63□□□□□ -0.07
SRP54-201ENST00000216774 PLCB1Q9NQ66 1216 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 TBC1D7Q9P0N9 293 aa14.63□□□□□ -0.07
SRP54-201ENST00000216774 BZW2Q9Y6E2 419 aaKnown RBP14.63□□□□□ -0.07
SRP54-201ENST00000216774 SHMT1P34896 483 aa14.62□□□□□ -0.07
SRP54-201ENST00000216774 FAM196AQ6ZSG2 479 aa14.62□□□□□ -0.07
SRP54-201ENST00000216774 PPM1EQ8WY54 764 aa14.62□□□□□ -0.07
SRP54-201ENST00000216774 GJA10Q969M2 543 aa14.62□□□□□ -0.07
SRP54-201ENST00000216774 DDX4Q9NQI0 724 aaKnown RBP14.62□□□□□ -0.07
SRP54-201ENST00000216774 ARFGEF1Q9Y6D6 1849 aa14.62□□□□□ -0.07
SRP54-201ENST00000216774 LTBP1Q14766 1721 aa14.62□□□□□ -0.07
SRP54-201ENST00000216774 QSER1Q2KHR3 1735 aa14.62□□□□□ -0.07
SRP54-201ENST00000216774 GREB1LQ9C091 1923 aaPredicted RBP14.62□□□□□ -0.07
SRP54-201ENST00000216774 POTEB3A0JP26 581 aa14.62□□□□□ -0.07
SRP54-201ENST00000216774 POTECB2RU33 542 aa14.62□□□□□ -0.07
SRP54-201ENST00000216774 HEXIM1O94992 359 aaKnown RBP14.62□□□□□ -0.07
SRP54-201ENST00000216774 FTCDO95954 541 aa14.62□□□□□ -0.07
SRP54-201ENST00000216774 ANXA13P27216 316 aa14.62□□□□□ -0.07
SRP54-201ENST00000216774 SLC12A3P55017 1021 aa14.62□□□□□ -0.07
SRP54-201ENST00000216774 GTF2IP78347 998 aa14.62□□□□□ -0.07
SRP54-201ENST00000216774 POTEBQ6S5H4 581 aa14.62□□□□□ -0.07
SRP54-201ENST00000216774 FRMD5Q7Z6J6 570 aa14.62□□□□□ -0.07
SRP54-201ENST00000216774 EFCAB13Q8IY85 973 aa14.62□□□□□ -0.07
SRP54-201ENST00000216774 IQCKQ8N0W5 287 aa14.62□□□□□ -0.07
SRP54-201ENST00000216774 FAM133AQ8N9E0 248 aa14.62□□□□□ -0.07
SRP54-201ENST00000216774 EIF1ADQ8N9N8 165 aaKnown RBP14.62□□□□□ -0.07
SRP54-201ENST00000216774 ZFP91Q96JP5 570 aaPredicted RBP14.62□□□□□ -0.07
SRP54-201ENST00000216774 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.62□□□□□ -0.07
SRP54-201ENST00000216774 ADAMTS1Q9UHI8 967 aa14.62□□□□□ -0.07
SRP54-201ENST00000216774 GRIN2DO15399 1336 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 ATP8B3O60423 1300 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 C6orf229H3BNL8 230 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 KRT18P05783 430 aaKnown RBP14.61□□□□□ -0.07
SRP54-201ENST00000216774 SLC16A2P36021 539 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 TNNC1P63316 161 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 GUCY2DQ02846 1103 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 KCNH2Q12809 1159 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 CDC37Q16543 378 aaPredicted RBP14.61□□□□□ -0.07
SRP54-201ENST00000216774 IFI16Q16666 785 aaKnown RBP14.61□□□□□ -0.07
SRP54-201ENST00000216774 TTMPQ5BVD1 217 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 WHAMMQ8TF30 809 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 ZIM3Q96PE6 472 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 CRAMP1Q96RY5 1269 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 COA1Q9GZY4 146 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 PLEKHA4Q9H4M7 779 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 EPB41L5Q9HCM4 733 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 TRAF3IP3Q9Y228 551 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 LRRC37AA6NMS7 1700 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 NPHP3-ACAD11A0A0J9YXS1 232 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 NR2F2P24468 414 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 CARSP49589 748 aaKnown RBP14.61□□□□□ -0.07
SRP54-201ENST00000216774 ARSHQ5FYA8 562 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 CFAP58Q5T655 872 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 MCTP2Q6DN12 878 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 CD302Q8IX05 232 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 USP38Q8NB14 1042 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 C1orf131Q8NDD1 294 aaKnown RBP14.61□□□□□ -0.07
SRP54-201ENST00000216774 ANO3Q9BYT9 981 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 DHX36Q9H2U1 1008 aaKnown RBP14.61□□□□□ -0.07
SRP54-201ENST00000216774 TMEM59LQ9UK28 342 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 HDAC9Q9UKV0 1011 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 NFU1Q9UMS0 254 aa14.61□□□□□ -0.07
SRP54-201ENST00000216774 SHTN1A0MZ66 631 aa14.6□□□□□ -0.07
SRP54-201ENST00000216774 EBAG9O00559 213 aa14.6□□□□□ -0.07
SRP54-201ENST00000216774 MED24O75448 989 aa14.6□□□□□ -0.07
SRP54-201ENST00000216774 SERPINB2P05120 415 aa14.6□□□□□ -0.07
SRP54-201ENST00000216774 HLA-DOAP06340 250 aa14.6□□□□□ -0.07
SRP54-201ENST00000216774 GNGT1P63211 74 aa14.6□□□□□ -0.07
SRP54-201ENST00000216774 ARID5AQ03989 594 aa14.6□□□□□ -0.07
SRP54-201ENST00000216774 AP3B2Q13367 1082 aa14.6□□□□□ -0.07
SRP54-201ENST00000216774 EMC10Q5UCC4 262 aa14.6□□□□□ -0.07
SRP54-201ENST00000216774 KCTD1Q719H9 257 aa14.6□□□□□ -0.07
SRP54-201ENST00000216774 ERMNQ8TAM6 284 aa14.6□□□□□ -0.07
SRP54-201ENST00000216774 BBXQ8WY36 941 aaPredicted RBP14.6□□□□□ -0.07
SRP54-201ENST00000216774 TAF4BQ92750 862 aa14.6□□□□□ -0.07
SRP54-201ENST00000216774 ARL8AQ96BM9 186 aa14.6□□□□□ -0.07
SRP54-201ENST00000216774 NGLY1Q96IV0 654 aa14.6□□□□□ -0.07
SRP54-201ENST00000216774 CCDC17Q96LX7 622 aa14.6□□□□□ -0.07
SRP54-201ENST00000216774 ARMCX3Q9UH62 379 aaPredicted RBP14.6□□□□□ -0.07
SRP54-201ENST00000216774 STK24Q9Y6E0 443 aa14.6□□□□□ -0.07
SRP54-201ENST00000216774 THSD7AQ9UPZ6 1657 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms