RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 GFPT2O94808 682 aa12.22□□□□□ -0.45
ACTN1-201ENST00000193403 FAM107AO95990 144 aa12.22□□□□□ -0.45
ACTN1-201ENST00000193403 ELF1P32519 619 aa12.22□□□□□ -0.45
ACTN1-201ENST00000193403 CRKLP46109 303 aaKnown RBP12.22□□□□□ -0.45
ACTN1-201ENST00000193403 VPS41P49754 854 aa12.22□□□□□ -0.45
ACTN1-201ENST00000193403 ADCY7P51828 1080 aa12.22□□□□□ -0.45
ACTN1-201ENST00000193403 CYP4A11Q02928 519 aa12.22□□□□□ -0.45
ACTN1-201ENST00000193403 DENND2CQ68D51 928 aa12.22□□□□□ -0.45
ACTN1-201ENST00000193403 TMED8Q6PL24 325 aaPredicted RBP12.22□□□□□ -0.45
ACTN1-201ENST00000193403 CLEC10AQ8IUN9 316 aa12.22□□□□□ -0.45
ACTN1-201ENST00000193403 CCDC197Q8NCU1 140 aa12.22□□□□□ -0.45
ACTN1-201ENST00000193403 ZBTB21Q9ULJ3 1066 aa12.22□□□□□ -0.45
ACTN1-201ENST00000193403 SHOX2O60902 331 aaPredicted RBP12.22□□□□□ -0.45
ACTN1-201ENST00000193403 H2AFZP0C0S5 128 aa12.22□□□□□ -0.45
ACTN1-201ENST00000193403 SLC16A2P36021 539 aa12.22□□□□□ -0.45
ACTN1-201ENST00000193403 PPP2R2AP63151 447 aa12.22□□□□□ -0.45
ACTN1-201ENST00000193403 LRRC14Q15048 493 aa12.22□□□□□ -0.45
ACTN1-201ENST00000193403 GLE1Q53GS7 698 aaKnown RBP12.22□□□□□ -0.45
ACTN1-201ENST00000193403 UNC13DQ70J99 1090 aa12.22□□□□□ -0.45
ACTN1-201ENST00000193403 H2AFVQ71UI9 128 aa12.22□□□□□ -0.45
ACTN1-201ENST00000193403 TNFRSF25Q93038 417 aa12.22□□□□□ -0.45
ACTN1-201ENST00000193403 SEC16BQ96JE7 1060 aa12.22□□□□□ -0.45
ACTN1-201ENST00000193403 CUEDC2Q9H467 287 aa12.22□□□□□ -0.45
ACTN1-201ENST00000193403 ZNF287Q9HBT7 754 aa12.22□□□□□ -0.45
ACTN1-201ENST00000193403 CCNL1Q9UK58 526 aaPredicted RBP12.22□□□□□ -0.45
ACTN1-201ENST00000193403 ATP6V0A2Q9Y487 856 aa12.22□□□□□ -0.45
ACTN1-201ENST00000193403 CTDP1Q9Y5B0 961 aaPredicted RBP12.22□□□□□ -0.45
ACTN1-201ENST00000193403 MYCNP04198 464 aaPredicted RBP12.22□□□□□ -0.45
ACTN1-201ENST00000193403 MYL1P05976 194 aa12.22□□□□□ -0.45
ACTN1-201ENST00000193403 FECHP22830 423 aa12.22□□□□□ -0.45
ACTN1-201ENST00000193403 AK8Q96MA6 479 aa12.22□□□□□ -0.45
ACTN1-201ENST00000193403 ARMCX3Q9UH62 379 aaPredicted RBP12.22□□□□□ -0.45
ACTN1-201ENST00000193403 TBCAO75347 108 aaKnown RBP12.21□□□□□ -0.45
ACTN1-201ENST00000193403 MMEP08473 750 aa12.21□□□□□ -0.45
ACTN1-201ENST00000193403 ITGA4P13612 1032 aa12.21□□□□□ -0.45
ACTN1-201ENST00000193403 GCKP35557 465 aa12.21□□□□□ -0.45
ACTN1-201ENST00000193403 ERVK-9P63128 1117 aa12.21□□□□□ -0.45
ACTN1-201ENST00000193403 PABPC4Q13310 644 aaKnown RBP eCLIP12.21□□□□□ -0.456e-7■■□□□ 13.6
ACTN1-201ENST00000193403 CYB5D1Q6P9G0 228 aa12.21□□□□□ -0.45
ACTN1-201ENST00000193403 SH3RF3Q8TEJ3 882 aaPredicted RBP12.21□□□□□ -0.45
ACTN1-201ENST00000193403 FAM84BQ96KN1 310 aaPredicted RBP12.21□□□□□ -0.45
ACTN1-201ENST00000193403 SH3GL2Q99962 352 aa12.21□□□□□ -0.45
ACTN1-201ENST00000193403 ATP8A2Q9NTI2 1148 aa12.21□□□□□ -0.45
ACTN1-201ENST00000193403 INTS9Q9NV88 658 aaKnown RBP12.21□□□□□ -0.45
ACTN1-201ENST00000193403 PCDHA12Q9UN75 941 aa12.21□□□□□ -0.45
ACTN1-201ENST00000193403 LOC102724428A0A0B4J2F2 783 aa12.21□□□□□ -0.45
ACTN1-201ENST00000193403 CDC25CP30307 473 aa12.21□□□□□ -0.45
ACTN1-201ENST00000193403 SIK1P57059 783 aa12.21□□□□□ -0.45
ACTN1-201ENST00000193403 MTMR3Q13615 1198 aa12.21□□□□□ -0.45
ACTN1-201ENST00000193403 UBE4AQ14139 1066 aa12.21□□□□□ -0.45
ACTN1-201ENST00000193403 ZYXQ15942 572 aaKnown RBP12.21□□□□□ -0.45
ACTN1-201ENST00000193403 EXOC3L4Q17RC7 722 aa12.21□□□□□ -0.45
ACTN1-201ENST00000193403 TRIM68Q6AZZ1 485 aa12.21□□□□□ -0.45
ACTN1-201ENST00000193403 CNPY4Q8N129 248 aa12.21□□□□□ -0.45
ACTN1-201ENST00000193403 LMBR1Q8WVP7 490 aa12.21□□□□□ -0.45
ACTN1-201ENST00000193403 FMO2Q99518 471 aa12.21□□□□□ -0.45
ACTN1-201ENST00000193403 MTA3Q9BTC8 594 aa12.21□□□□□ -0.45
ACTN1-201ENST00000193403 LRRC27Q9C0I9 530 aa12.21□□□□□ -0.45
ACTN1-201ENST00000193403 BARHL2Q9NY43 387 aa12.21□□□□□ -0.45
ACTN1-201ENST00000193403 SRP68Q9UHB9 627 aaKnown RBP12.21□□□□□ -0.45
ACTN1-201ENST00000193403 AMFRQ9UKV5 643 aa12.21□□□□□ -0.45
ACTN1-201ENST00000193403 CEP83Q9Y592 693 aa12.21□□□□□ -0.45
ACTN1-201ENST00000193403 EP400Q96L91 3159 aa12.21□□□□□ -0.46
ACTN1-201ENST00000193403 LRRN2O75325 713 aa12.21□□□□□ -0.46
ACTN1-201ENST00000193403 GJC1P36383 396 aa12.21□□□□□ -0.46
ACTN1-201ENST00000193403 IL6STP40189 918 aaPredicted RBP12.21□□□□□ -0.46
ACTN1-201ENST00000193403 RPS8P62241 208 aaKnown RBP12.21□□□□□ -0.46
ACTN1-201ENST00000193403 COASYQ13057 564 aa12.21□□□□□ -0.46
ACTN1-201ENST00000193403 NBPF9Q3BBW0 867 aa12.21□□□□□ -0.46
ACTN1-201ENST00000193403 USH1GQ495M9 461 aa12.21□□□□□ -0.46
ACTN1-201ENST00000193403 ZKSCAN4Q969J2 545 aaPredicted RBP12.21□□□□□ -0.46
ACTN1-201ENST00000193403 CEP72Q9P209 647 aa12.21□□□□□ -0.46
ACTN1-201ENST00000193403 RASSF10A6NK89 507 aa12.2□□□□□ -0.46
ACTN1-201ENST00000193403 GCNT3O95395 438 aa12.2□□□□□ -0.46
ACTN1-201ENST00000193403 CPP00450 1065 aa12.2□□□□□ -0.46
ACTN1-201ENST00000193403 XRCC5P13010 732 aaKnown RBP12.2□□□□□ -0.46
ACTN1-201ENST00000193403 SLC9A1P19634 815 aa12.2□□□□□ -0.46
ACTN1-201ENST00000193403 CDC37Q16543 378 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-201ENST00000193403 PARP10Q53GL7 1025 aa12.2□□□□□ -0.46
ACTN1-201ENST00000193403 HOOK3Q86VS8 718 aa12.2□□□□□ -0.46
ACTN1-201ENST00000193403 USP38Q8NB14 1042 aa12.2□□□□□ -0.46
ACTN1-201ENST00000193403 NSUN4Q96CB9 384 aaKnown RBP12.2□□□□□ -0.46
ACTN1-201ENST00000193403 VCPKMTQ9H867 229 aa12.2□□□□□ -0.46
ACTN1-201ENST00000193403 SWAP70Q9UH65 585 aa12.2□□□□□ -0.46
ACTN1-201ENST00000193403 DDX20Q9UHI6 824 aaKnown RBP12.2□□□□□ -0.46
ACTN1-201ENST00000193403 LRRC63Q05C16 580 aa12.2□□□□□ -0.46
ACTN1-201ENST00000193403 KCNH2Q12809 1159 aa12.2□□□□□ -0.46
ACTN1-201ENST00000193403 RNF10Q8N5U6 811 aaKnown RBP12.2□□□□□ -0.46
ACTN1-201ENST00000193403 PRPF38AQ8NAV1 312 aaKnown RBP12.2□□□□□ -0.46
ACTN1-201ENST00000193403 CAVIN3Q969G5 261 aa12.2□□□□□ -0.46
ACTN1-201ENST00000193403 IQCDQ96DY2 449 aa12.2□□□□□ -0.46
ACTN1-201ENST00000193403 NUDT12Q9BQG2 462 aa12.2□□□□□ -0.46
ACTN1-201ENST00000193403 RNF14Q9UBS8 474 aa12.2□□□□□ -0.46
ACTN1-201ENST00000193403 CHORDC1Q9UHD1 332 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-201ENST00000193403 DDX25Q9UHL0 483 aaKnown RBP12.2□□□□□ -0.46
ACTN1-201ENST00000193403 HDAC9Q9UKV0 1011 aa12.2□□□□□ -0.46
ACTN1-201ENST00000193403 ZC3H4Q9UPT8 1303 aaKnown RBP12.2□□□□□ -0.46
ACTN1-201ENST00000193403 SFI1A8K8P3 1242 aa12.2□□□□□ -0.46
ACTN1-201ENST00000193403 STXBP3O00186 592 aa12.2□□□□□ -0.46
ACTN1-201ENST00000193403 SKOR1P84550 965 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms