RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 KLHDC7AQ5VTJ3 777 aa18.75■□□□□ 0.59
PTPN18-201ENST00000175756 CEP72Q9P209 647 aa18.75■□□□□ 0.59
PTPN18-201ENST00000175756 PCDHA1Q9Y5I3 950 aa18.75■□□□□ 0.59
PTPN18-201ENST00000175756 HDLBPQ00341 1268 aaKnown RBP18.75■□□□□ 0.59
PTPN18-201ENST00000175756 ZNF211Q13398 564 aaPredicted RBP18.75■□□□□ 0.59
PTPN18-201ENST00000175756 NFIXQ14938 502 aa18.75■□□□□ 0.59
PTPN18-201ENST00000175756 GRIK5Q16478 980 aa18.75■□□□□ 0.59
PTPN18-201ENST00000175756 MYCT1Q8N699 235 aa18.75■□□□□ 0.59
PTPN18-201ENST00000175756 CASKIN2Q8WXE0 1202 aa18.75■□□□□ 0.59
PTPN18-201ENST00000175756 NGLY1Q96IV0 654 aa18.75■□□□□ 0.59
PTPN18-201ENST00000175756 ZMYND12Q9H0C1 365 aa18.75■□□□□ 0.59
PTPN18-201ENST00000175756 PVALEFA0A1B0GWK0 134 aa18.75■□□□□ 0.59
PTPN18-201ENST00000175756 PPP1R37O75864 691 aa18.75■□□□□ 0.59
PTPN18-201ENST00000175756 PLCG2P16885 1265 aa18.75■□□□□ 0.59
PTPN18-201ENST00000175756 TNFAIP3P21580 790 aa18.75■□□□□ 0.59
PTPN18-201ENST00000175756 HNRNPH1P31943 449 aaKnown RBP18.75■□□□□ 0.59
PTPN18-201ENST00000175756 COPB2P35606 906 aa18.75■□□□□ 0.59
PTPN18-201ENST00000175756 CENPPQ6IPU0 288 aa18.75■□□□□ 0.59
PTPN18-201ENST00000175756 TBC1D31Q96DN5 1066 aa18.75■□□□□ 0.59
PTPN18-201ENST00000175756 PAIP2Q9BPZ3 127 aaKnown RBP18.75■□□□□ 0.59
PTPN18-201ENST00000175756 ZBTB21Q9ULJ3 1066 aa18.75■□□□□ 0.59
PTPN18-201ENST00000175756 MYH10P35580 1976 aa18.74■□□□□ 0.59
PTPN18-201ENST00000175756 PGRMC1O00264 195 aaKnown RBP18.74■□□□□ 0.59
PTPN18-201ENST00000175756 NLRP14Q86W24 1093 aa18.74■□□□□ 0.59
PTPN18-201ENST00000175756 TPH2Q8IWU9 490 aa18.74■□□□□ 0.59
PTPN18-201ENST00000175756 CACNA2D3Q8IZS8 1091 aa18.74■□□□□ 0.59
PTPN18-201ENST00000175756 AMFRQ9UKV5 643 aa18.74■□□□□ 0.59
PTPN18-201ENST00000175756 A6NNZ2 444 aa18.74■□□□□ 0.59
PTPN18-201ENST00000175756 GBP2P32456 591 aaPredicted RBP18.74■□□□□ 0.59
PTPN18-201ENST00000175756 TUBB8Q3ZCM7 444 aa18.74■□□□□ 0.59
PTPN18-201ENST00000175756 SLC51AQ86UW1 340 aa18.74■□□□□ 0.59
PTPN18-201ENST00000175756 CELF4Q9BZC1 486 aaKnown RBP18.74■□□□□ 0.59
PTPN18-201ENST00000175756 NT5C3AQ9H0P0 336 aa18.74■□□□□ 0.59
PTPN18-201ENST00000175756 KCNK9Q9NPC2 374 aa18.74■□□□□ 0.59
PTPN18-201ENST00000175756 GSTTP1A0A1W2PQM5 241 aa18.73■□□□□ 0.59
PTPN18-201ENST00000175756 SART1O43290 800 aaKnown RBP18.73■□□□□ 0.59
PTPN18-201ENST00000175756 HLA-DOAP06340 250 aa18.73■□□□□ 0.59
PTPN18-201ENST00000175756 MAGOHP61326 146 aaKnown RBP18.73■□□□□ 0.59
PTPN18-201ENST00000175756 MAGOHBQ96A72 148 aaKnown RBP18.73■□□□□ 0.59
PTPN18-201ENST00000175756 ATP6V1G3Q96LB4 118 aa18.73■□□□□ 0.59
PTPN18-201ENST00000175756 CTTNBP2NLQ9P2B4 639 aa18.73■□□□□ 0.59
PTPN18-201ENST00000175756 CCNL1Q9UK58 526 aaPredicted RBP18.73■□□□□ 0.59
PTPN18-201ENST00000175756 FBXL5Q9UKA1 691 aa18.73■□□□□ 0.59
PTPN18-201ENST00000175756 COL5A2P05997 1499 aaPredicted RBP18.73■□□□□ 0.59
PTPN18-201ENST00000175756 FGGP02679 453 aa18.73■□□□□ 0.59
PTPN18-201ENST00000175756 RPL13P26373 211 aaKnown RBP18.73■□□□□ 0.59
PTPN18-201ENST00000175756 STAT1P42224 750 aa18.73■□□□□ 0.59
PTPN18-201ENST00000175756 SLC20A2Q08357 652 aa18.73■□□□□ 0.59
PTPN18-201ENST00000175756 ADCY1Q08828 1119 aa18.73■□□□□ 0.59
PTPN18-201ENST00000175756 SBK1Q52WX2 424 aa18.73■□□□□ 0.59
PTPN18-201ENST00000175756 RNF10Q8N5U6 811 aaKnown RBP18.73■□□□□ 0.59
PTPN18-201ENST00000175756 GGA1Q9UJY5 639 aa18.73■□□□□ 0.59
PTPN18-201ENST00000175756 MYH2Q9UKX2 1941 aa18.73■□□□□ 0.59
PTPN18-201ENST00000175756 USP17L10C9JJH3 530 aa18.73■□□□□ 0.59
PTPN18-201ENST00000175756 RPSAP08865 295 aaKnown RBP18.73■□□□□ 0.59
PTPN18-201ENST00000175756 UBXN2AP68543 259 aa18.73■□□□□ 0.59
PTPN18-201ENST00000175756 ZNF473Q8WTR7 871 aaKnown RBP18.73■□□□□ 0.59
PTPN18-201ENST00000175756 CTNND1O60716 968 aaKnown RBP18.72■□□□□ 0.59
PTPN18-201ENST00000175756 PPP1R7Q15435 360 aa18.72■□□□□ 0.59
PTPN18-201ENST00000175756 GJB7Q6PEY0 223 aa18.72■□□□□ 0.59
PTPN18-201ENST00000175756 WHAMMQ8TF30 809 aa18.72■□□□□ 0.59
PTPN18-201ENST00000175756 LRRC15Q8TF66 581 aa18.72■□□□□ 0.59
PTPN18-201ENST00000175756 PTPN22Q9Y2R2 807 aa18.72■□□□□ 0.59
PTPN18-201ENST00000175756 MEFVO15553 781 aaPredicted RBP18.72■□□□□ 0.59
PTPN18-201ENST00000175756 SLC18A3Q16572 532 aa18.72■□□□□ 0.59
PTPN18-201ENST00000175756 MEX3CQ5U5Q3 659 aaKnown RBP18.72■□□□□ 0.59
PTPN18-201ENST00000175756 PLCD4Q9BRC7 762 aa18.72■□□□□ 0.59
PTPN18-201ENST00000175756 GCNT4Q9P109 453 aa18.72■□□□□ 0.59
PTPN18-201ENST00000175756 A0A1W2PQJ5 194 aa18.72■□□□□ 0.59
PTPN18-201ENST00000175756 PALM3A6NDB9 673 aaPredicted RBP18.72■□□□□ 0.59
PTPN18-201ENST00000175756 DDX39AO00148 427 aaKnown RBP18.72■□□□□ 0.59
PTPN18-201ENST00000175756 GJC1P36383 396 aa18.72■□□□□ 0.59
PTPN18-201ENST00000175756 PTK2Q05397 1052 aa18.72■□□□□ 0.59
PTPN18-201ENST00000175756 HS2ST1Q7LGA3 356 aa18.72■□□□□ 0.59
PTPN18-201ENST00000175756 TAF1DQ9H5J8 278 aaPredicted RBP18.72■□□□□ 0.59
PTPN18-201ENST00000175756 RASSF10A6NK89 507 aa18.71■□□□□ 0.59
PTPN18-201ENST00000175756 GNA14O95837 355 aa18.71■□□□□ 0.59
PTPN18-201ENST00000175756 CLTAP09496 248 aa18.71■□□□□ 0.59
PTPN18-201ENST00000175756 VPS41P49754 854 aa18.71■□□□□ 0.59
PTPN18-201ENST00000175756 CACNB3P54284 484 aa18.71■□□□□ 0.59
PTPN18-201ENST00000175756 SF3B3Q15393 1217 aaKnown RBP18.71■□□□□ 0.59
PTPN18-201ENST00000175756 GLE1Q53GS7 698 aaKnown RBP18.71■□□□□ 0.59
PTPN18-201ENST00000175756 C8orf37Q96NL8 207 aa18.71■□□□□ 0.59
PTPN18-201ENST00000175756 MYCBPQ99417 103 aaPredicted RBP18.71■□□□□ 0.59
PTPN18-201ENST00000175756 BLOC1S4Q9NUP1 217 aa18.71■□□□□ 0.59
PTPN18-201ENST00000175756 TTI1O43156 1089 aa18.71■□□□□ 0.59
PTPN18-201ENST00000175756 GKAP1Q5VSY0 366 aaPredicted RBP18.71■□□□□ 0.59
PTPN18-201ENST00000175756 PIGOQ8TEQ8 1089 aa18.71■□□□□ 0.59
PTPN18-201ENST00000175756 BHMT2Q9H2M3 363 aa18.71■□□□□ 0.59
PTPN18-201ENST00000175756 USP40Q9NVE5 1235 aa18.71■□□□□ 0.59
PTPN18-201ENST00000175756 RNF14Q9UBS8 474 aa18.71■□□□□ 0.59
PTPN18-201ENST00000175756 SIK3Q9Y2K2 1263 aa18.71■□□□□ 0.59
PTPN18-201ENST00000175756 CD2APQ9Y5K6 639 aa18.71■□□□□ 0.59
PTPN18-201ENST00000175756 N4BP2Q86UW6 1770 aaPredicted RBP18.71■□□□□ 0.59
PTPN18-201ENST00000175756 AFPP02771 609 aaKnown RBP18.71■□□□□ 0.59
PTPN18-201ENST00000175756 MDH1P40925 334 aaKnown RBP18.71■□□□□ 0.59
PTPN18-201ENST00000175756 SFR1Q86XK3 245 aa18.71■□□□□ 0.59
PTPN18-201ENST00000175756 CHORDC1Q9UHD1 332 aaPredicted RBP18.71■□□□□ 0.59
PTPN18-201ENST00000175756 SNX24Q9Y343 169 aa18.71■□□□□ 0.59
PTPN18-201ENST00000175756 PHF20L1A8MW92 1017 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms