RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 CARSP49589 748 aaKnown RBP9.13□□□□□ -0.95
CDC27-201ENST00000066544 KCNH2Q12809 1159 aa9.13□□□□□ -0.95
CDC27-201ENST00000066544 EPB41L5Q9HCM4 733 aa9.13□□□□□ -0.95
CDC27-201ENST00000066544 FAM184BQ9ULE4 1060 aa9.13□□□□□ -0.95
CDC27-201ENST00000066544 LAMB1P07942 1786 aa9.13□□□□□ -0.95
CDC27-201ENST00000066544 CDC37Q16543 378 aaPredicted RBP9.13□□□□□ -0.95
CDC27-201ENST00000066544 SFR1Q86XK3 245 aa9.13□□□□□ -0.95
CDC27-201ENST00000066544 FAM76AQ8TAV0 307 aa9.13□□□□□ -0.95
CDC27-201ENST00000066544 ARL8AQ96BM9 186 aa9.13□□□□□ -0.95
CDC27-201ENST00000066544 P2RX7Q99572 595 aaKnown RBP9.13□□□□□ -0.95
CDC27-201ENST00000066544 DLEC1Q9Y238 1755 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 TMCO5BA8MYB1 307 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 CETN3O15182 167 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 KCNA1Q09470 495 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 GJB7Q6PEY0 223 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 ZNF622Q969S3 477 aaKnown RBP eCLIP9.12□□□□□ -0.954e-6■□□□□ 10.8
CDC27-201ENST00000066544 RGL1Q9NZL6 768 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 HEXIM1O94992 359 aaKnown RBP9.12□□□□□ -0.95
CDC27-201ENST00000066544 GLI1P08151 1106 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 ZNF76P36508 570 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 HLTFQ14527 1009 aaKnown RBP eCLIP9.12□□□□□ -0.95
CDC27-201ENST00000066544 MUM1L1Q5H9M0 696 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 HAUS3Q68CZ6 603 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 KSR1Q8IVT5 923 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 FAM163AQ96GL9 167 aaPredicted RBP9.12□□□□□ -0.95
CDC27-201ENST00000066544 BHMT2Q9H2M3 363 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 PSD3Q9NYI0 1048 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 STIM2Q9P246 746 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 DDTLA6NHG4 134 aaPredicted RBP9.12□□□□□ -0.95
CDC27-201ENST00000066544 KRT14P02533 472 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 FAM153BP0C7A2 387 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 HNRNPH3P31942 346 aaKnown RBP9.12□□□□□ -0.95
CDC27-201ENST00000066544 PLS1Q14651 629 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 FAM153CQ494X1 144 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 MSL1Q68DK7 614 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 PIGOQ8TEQ8 1089 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.12□□□□□ -0.953e-7■■■■■ 29.6
CDC27-201ENST00000066544 FAM153AQ9UHL3 310 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 TARSL2A2RTX5 802 aaKnown RBP9.12□□□□□ -0.95
CDC27-201ENST00000066544 CDK17Q00537 523 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 ASIC2Q16515 512 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 TEKT1Q969V4 418 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 LRRC27Q9C0I9 530 aa9.12□□□□□ -0.95
CDC27-201ENST00000066544 ZC3H4Q9UPT8 1303 aaKnown RBP9.12□□□□□ -0.95
CDC27-201ENST00000066544 KCNK3O14649 394 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 TRIM37O94972 964 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 MYBP10242 640 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 CASP4P49662 377 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 ARHGAP4P98171 946 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 CRY2Q49AN0 593 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 SRLQ86TD4 932 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 ZEB2O60315 1214 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 CFAP221Q4G0U5 840 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 ZCWPW2Q504Y3 356 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 ARSHQ5FYA8 562 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 GPATCH4Q5T3I0 446 aaKnown RBP9.11□□□□□ -0.95
CDC27-201ENST00000066544 PPP4R3AQ6IN85 833 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 CATSPER3Q86XQ3 398 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 DHX36Q9H2U1 1008 aaKnown RBP9.11□□□□□ -0.95
CDC27-201ENST00000066544 DNAJC18Q9H819 358 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 TMEM51Q9NW97 253 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 ATP6V0A2Q9Y487 856 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 ZBTB39O15060 712 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 SNHG28P0DPA3 235 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 CCT5P48643 541 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 ZYXQ15942 572 aaKnown RBP9.11□□□□□ -0.95
CDC27-201ENST00000066544 CERKLQ49MI3 558 aaPredicted RBP9.11□□□□□ -0.95
CDC27-201ENST00000066544 CERS3Q8IU89 383 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 TRIM59Q8IWR1 403 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 CCDC43Q96MW1 224 aaKnown RBP9.11□□□□□ -0.95
CDC27-201ENST00000066544 NT5C3AQ9H0P0 336 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 PKD2L1Q9P0L9 805 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 CEP72Q9P209 647 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 ARMCX3Q9UH62 379 aaPredicted RBP9.11□□□□□ -0.95
CDC27-201ENST00000066544 CEP104O60308 925 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 GCNT3O95395 438 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 SERPING1P05155 500 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 SMARCA1P28370 1054 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 MMGT1Q8N4V1 131 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 BBXQ8WY36 941 aaPredicted RBP9.11□□□□□ -0.95
CDC27-201ENST00000066544 REEP2Q9BRK0 252 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 AP1M1Q9BXS5 423 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 HDAC9Q9UKV0 1011 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 SPDYE3A6NKU9 549 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 PTK2Q05397 1052 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 PSMD2Q13200 908 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 MAEAQ7L5Y9 396 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 DDX42Q86XP3 938 aaKnown RBP eCLIP9.11□□□□□ -0.95
CDC27-201ENST00000066544 SEPT12Q8IYM1 358 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 RDH13Q8NBN7 331 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 AENQ8WTP8 325 aaKnown RBP9.11□□□□□ -0.95
CDC27-201ENST00000066544 FAM107BQ9H098 131 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 SAMM50Q9Y512 469 aa9.11□□□□□ -0.95
CDC27-201ENST00000066544 IVLP07476 585 aa9.1□□□□□ -0.95
CDC27-201ENST00000066544 ICA1Q05084 483 aa9.1□□□□□ -0.95
CDC27-201ENST00000066544 PDCLQ13371 301 aa9.1□□□□□ -0.95
CDC27-201ENST00000066544 ASTE1Q2TB18 679 aaPredicted RBP9.1□□□□□ -0.95
CDC27-201ENST00000066544 TBC1D10BQ4KMP7 808 aaPredicted RBP9.1□□□□□ -0.95
CDC27-201ENST00000066544 NAA35Q5VZE5 725 aa9.1□□□□□ -0.95
CDC27-201ENST00000066544 APOBEC3HQ6NTF7 200 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms