RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 TELO2Q9Y4R8 837 aa18.24■□□□□ 0.51
ERCC1-201ENST00000013807 GSTTP1A0A1W2PQM5 241 aa18.23■□□□□ 0.51
ERCC1-201ENST00000013807 RXRAP19793 462 aa18.23■□□□□ 0.51
ERCC1-201ENST00000013807 FUT2Q10981 343 aa18.23■□□□□ 0.51
ERCC1-201ENST00000013807 APOA5Q6Q788 366 aa18.23■□□□□ 0.51
ERCC1-201ENST00000013807 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.23■□□□□ 0.51
ERCC1-201ENST00000013807 CENPQQ7L2Z9 268 aaPredicted RBP18.23■□□□□ 0.51
ERCC1-201ENST00000013807 SPRED2Q7Z698 418 aa18.23■□□□□ 0.51
ERCC1-201ENST00000013807 ADAMTS19Q8TE59 1207 aa18.23■□□□□ 0.51
ERCC1-201ENST00000013807 SEPT1Q8WYJ6 367 aa18.23■□□□□ 0.51
ERCC1-201ENST00000013807 TGS1Q96RS0 853 aaKnown RBP18.23■□□□□ 0.51
ERCC1-201ENST00000013807 SUGCTQ9HAC7 445 aa18.23■□□□□ 0.51
ERCC1-201ENST00000013807 RBM28Q9NW13 759 aaKnown RBP18.23■□□□□ 0.51
ERCC1-201ENST00000013807 AMHP03971 560 aa18.22■□□□□ 0.51
ERCC1-201ENST00000013807 DHX32Q7L7V1 743 aaKnown RBP18.22■□□□□ 0.51
ERCC1-201ENST00000013807 TRIM50Q86XT4 487 aa18.22■□□□□ 0.51
ERCC1-201ENST00000013807 LMBR1Q8WVP7 490 aa18.22■□□□□ 0.51
ERCC1-201ENST00000013807 SEPT8Q92599 483 aa18.22■□□□□ 0.51
ERCC1-201ENST00000013807 TOP1MTQ969P6 601 aa18.22■□□□□ 0.51
ERCC1-201ENST00000013807 NEK1Q96PY6 1258 aa18.22■□□□□ 0.51
ERCC1-201ENST00000013807 JADE2Q9NQC1 790 aa18.22■□□□□ 0.51
ERCC1-201ENST00000013807 PCDHA6Q9UN73 950 aa18.22■□□□□ 0.51
ERCC1-201ENST00000013807 PCDHA8Q9Y5H6 950 aa18.22■□□□□ 0.51
ERCC1-201ENST00000013807 WDR81Q562E7 1941 aa18.21■□□□□ 0.51
ERCC1-201ENST00000013807 MBLAC1A4D2B0 266 aaPredicted RBP18.21■□□□□ 0.51
ERCC1-201ENST00000013807 SPDYE3A6NKU9 549 aa18.21■□□□□ 0.51
ERCC1-201ENST00000013807 hCG_1984214I3L0E3 225 aa18.21■□□□□ 0.51
ERCC1-201ENST00000013807 TCF7P36402 384 aaPredicted RBP18.21■□□□□ 0.51
ERCC1-201ENST00000013807 RCAN1P53805 252 aa18.21■□□□□ 0.51
ERCC1-201ENST00000013807 MTMR1Q13613 665 aa18.21■□□□□ 0.51
ERCC1-201ENST00000013807 KRT40Q6A162 431 aa18.21■□□□□ 0.51
ERCC1-201ENST00000013807 TAF2Q6P1X5 1199 aa18.21■□□□□ 0.51
ERCC1-201ENST00000013807 ZNF713Q8N859 430 aaPredicted RBP18.21■□□□□ 0.51
ERCC1-201ENST00000013807 APBB2Q92870 758 aa18.21■□□□□ 0.51
ERCC1-201ENST00000013807 UHRF1Q96T88 793 aaPredicted RBP18.21■□□□□ 0.51
ERCC1-201ENST00000013807 LRRC2Q9BYS8 371 aa18.21■□□□□ 0.51
ERCC1-201ENST00000013807 OSBPL7Q9BZF2 842 aa18.21■□□□□ 0.51
ERCC1-201ENST00000013807 EHMT1Q9H9B1 1298 aa18.21■□□□□ 0.51
ERCC1-201ENST00000013807 ERAP1Q9NZ08 941 aa18.21■□□□□ 0.51
ERCC1-201ENST00000013807 CNTNAP5Q8WYK1 1306 aa18.21■□□□□ 0.51
ERCC1-201ENST00000013807 MYH9P35579 1960 aaKnown RBP18.21■□□□□ 0.5
ERCC1-201ENST00000013807 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.2■□□□□ 0.5
ERCC1-201ENST00000013807 TFF2Q03403 129 aa18.2■□□□□ 0.5
ERCC1-201ENST00000013807 PPP1R18Q6NYC8 613 aa18.2■□□□□ 0.5
ERCC1-201ENST00000013807 SYNE3Q6ZMZ3 975 aa18.2■□□□□ 0.5
ERCC1-201ENST00000013807 MICU3Q86XE3 530 aa18.2■□□□□ 0.5
ERCC1-201ENST00000013807 MICALL1Q8N3F8 863 aa18.2■□□□□ 0.5
ERCC1-201ENST00000013807 CCDC82Q8N4S0 544 aa18.2■□□□□ 0.5
ERCC1-201ENST00000013807 RIC8AQ9NPQ8 531 aa18.2■□□□□ 0.5
ERCC1-201ENST00000013807 MYO7AQ13402 2215 aa18.2■□□□□ 0.5
ERCC1-201ENST00000013807 hCG_1642624A0A1W2PR95 340 aa18.19■□□□□ 0.5
ERCC1-201ENST00000013807 FOSP01100 380 aaPredicted RBP18.19■□□□□ 0.5
ERCC1-201ENST00000013807 CHRNA1P02708 482 aa18.19■□□□□ 0.5
ERCC1-201ENST00000013807 RPLP2P05387 115 aaKnown RBP18.19■□□□□ 0.5
ERCC1-201ENST00000013807 ARHGAP4P98171 946 aa18.19■□□□□ 0.5
ERCC1-201ENST00000013807 KRT32Q14532 448 aa18.19■□□□□ 0.5
ERCC1-201ENST00000013807 UBE2SQ16763 222 aa18.19■□□□□ 0.5
ERCC1-201ENST00000013807 MARCH8Q5T0T0 291 aa18.19■□□□□ 0.5
ERCC1-201ENST00000013807 UTP14CQ5TAP6 766 aaKnown RBP18.19■□□□□ 0.5
ERCC1-201ENST00000013807 WWC2Q6AWC2 1192 aa18.19■□□□□ 0.5
ERCC1-201ENST00000013807 TYW1BQ6NUM6 668 aa18.19■□□□□ 0.5
ERCC1-201ENST00000013807 RASEFQ8IZ41 740 aa18.19■□□□□ 0.5
ERCC1-201ENST00000013807 EVPLQ92817 2033 aa18.19■□□□□ 0.5
ERCC1-201ENST00000013807 KCNB2Q92953 911 aa18.19■□□□□ 0.5
ERCC1-201ENST00000013807 HLA-CQ95604 372 aa18.19■□□□□ 0.5
ERCC1-201ENST00000013807 SAMD11Q96NU1 681 aa18.19■□□□□ 0.5
ERCC1-201ENST00000013807 SMARCAD1Q9H4L7 1026 aa18.19■□□□□ 0.5
ERCC1-201ENST00000013807 BRPF3Q9ULD4 1205 aa18.19■□□□□ 0.5
ERCC1-201ENST00000013807 HMGB1P09429 215 aaKnown RBP18.18■□□□□ 0.5
ERCC1-201ENST00000013807 MGAT3Q09327 533 aa18.18■□□□□ 0.5
ERCC1-201ENST00000013807 ADCK5Q3MIX3 580 aa18.18■□□□□ 0.5
ERCC1-201ENST00000013807 HEATR3Q7Z4Q2 680 aa18.18■□□□□ 0.5
ERCC1-201ENST00000013807 MYOCDQ8IZQ8 938 aa18.18■□□□□ 0.5
ERCC1-201ENST00000013807 IL27Q8NEV9 243 aa18.18■□□□□ 0.5
ERCC1-201ENST00000013807 MXRA8Q9BRK3 442 aa18.18■□□□□ 0.5
ERCC1-201ENST00000013807 GLT8D2Q9H1C3 349 aa18.18■□□□□ 0.5
ERCC1-201ENST00000013807 KCNH7Q9NS40 1196 aa18.18■□□□□ 0.5
ERCC1-201ENST00000013807 FAM217BQ9NTX9 383 aaPredicted RBP18.18■□□□□ 0.5
ERCC1-201ENST00000013807 NFASCO94856 1347 aa18.18■□□□□ 0.5
ERCC1-201ENST00000013807 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.17■□□□□ 0.5
ERCC1-201ENST00000013807 ZBTB43O43298 467 aa18.17■□□□□ 0.5
ERCC1-201ENST00000013807 CLK2P49760 499 aaKnown RBP18.17■□□□□ 0.5
ERCC1-201ENST00000013807 KCNQ1P51787 676 aa18.17■□□□□ 0.5
ERCC1-201ENST00000013807 SP4Q02446 784 aa18.17■□□□□ 0.5
ERCC1-201ENST00000013807 SKIV2LQ15477 1246 aaKnown RBP18.17■□□□□ 0.5
ERCC1-201ENST00000013807 RTN1Q16799 776 aa18.17■□□□□ 0.5
ERCC1-201ENST00000013807 RAB11FIP4Q86YS3 637 aa18.17■□□□□ 0.5
ERCC1-201ENST00000013807 FBXL16Q8N461 479 aa18.17■□□□□ 0.5
ERCC1-201ENST00000013807 GDPD5Q8WTR4 605 aa18.17■□□□□ 0.5
ERCC1-201ENST00000013807 PCYT2Q99447 389 aa18.17■□□□□ 0.5
ERCC1-201ENST00000013807 IFIH1Q9BYX4 1025 aaKnown RBP18.17■□□□□ 0.5
ERCC1-201ENST00000013807 BARHL2Q9NY43 387 aa18.17■□□□□ 0.5
ERCC1-201ENST00000013807 SQORQ9Y6N5 450 aa18.17■□□□□ 0.5
ERCC1-201ENST00000013807 ATG2AQ2TAZ0 1938 aa18.17■□□□□ 0.5
ERCC1-201ENST00000013807 RRN3P2A6NIE6 340 aa18.16■□□□□ 0.5
ERCC1-201ENST00000013807 STXBP3O00186 592 aa18.16■□□□□ 0.5
ERCC1-201ENST00000013807 MEIS1O00470 390 aa18.16■□□□□ 0.5
ERCC1-201ENST00000013807 ATG7O95352 703 aa18.16■□□□□ 0.5
ERCC1-201ENST00000013807 CTSHP09668 335 aa18.16■□□□□ 0.5
ERCC1-201ENST00000013807 PPFIA1Q13136 1202 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms