RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 CAND2O75155 1236 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 XRCC5P13010 732 aaKnown RBP13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 CCNE1P24864 410 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 PRDX5P30044 214 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 GJC1P36383 396 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 GGCXP38435 758 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 GUCY2DQ02846 1103 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 CALCOCO2Q13137 446 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 PRKG1Q13976 671 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 MAEAQ7L5Y9 396 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 LARGE2Q8N3Y3 721 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 MASTLQ96GX5 879 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 DISC1Q9NRI5 854 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 IKBKGQ9Y6K9 419 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 KCNK3O14649 394 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 CTNND1O60716 968 aaKnown RBP13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 GNA14O95837 355 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 PAX7P23759 505 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 ZBED6P86452 979 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 RASSF7Q02833 373 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 LRRC41Q15345 812 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 DPP8Q6V1X1 898 aaPredicted RBP13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 MTA3Q9BTC8 594 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 BEGAINQ9BUH8 593 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 TSPYL2Q9H2G4 693 aaPredicted RBP13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 PANK4Q9NVE7 773 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 MTUS1Q9ULD2 1270 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 RABGAP1Q9Y3P9 1069 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 RGPD3A6NKT7 1758 aaPredicted RBP13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 RGPD4Q7Z3J3 1758 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 CFBP00751 764 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 PLCG1P19174 1290 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 RASSF2P50749 326 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 ZBTB17Q13105 803 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 ADAM9Q13443 819 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 CFAP157Q5JU67 520 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 UHMK1Q8TAS1 419 aaKnown RBP13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 OSBPL9Q96SU4 736 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 IRX2Q9BZI1 471 aaPredicted RBP13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 SENP2Q9HC62 589 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 SPOPO43791 374 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 NMT2O60551 498 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 MYL1P05976 194 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 MRPS25P82663 173 aaKnown RBP13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 DGKHQ86XP1 1220 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 RDH13Q8NBN7 331 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 CRAMP1Q96RY5 1269 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 WDR24Q96S15 920 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 UTP11Q9Y3A2 253 aaKnown RBP13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 ADGRG1Q9Y653 693 aa13.22□□□□□ -0.29
TSPAN9-201ENST00000011898 EXOC3O60645 756 aa13.21□□□□□ -0.29
TSPAN9-201ENST00000011898 PRR16Q569H4 304 aa13.21□□□□□ -0.29
TSPAN9-201ENST00000011898 USP49Q70CQ1 688 aa13.21□□□□□ -0.29
TSPAN9-201ENST00000011898 CELF1Q92879 486 aaKnown RBP13.21□□□□□ -0.29
TSPAN9-201ENST00000011898 DDX25Q9UHL0 483 aaKnown RBP13.21□□□□□ -0.29
TSPAN9-201ENST00000011898 TUBE1Q9UJT0 475 aa13.21□□□□□ -0.29
TSPAN9-201ENST00000011898 HDAC9Q9UKV0 1011 aa13.21□□□□□ -0.29
TSPAN9-201ENST00000011898 PPEF1O14829 653 aaPredicted RBP13.21□□□□□ -0.29
TSPAN9-201ENST00000011898 CYP2D6P10635 497 aa13.21□□□□□ -0.29
TSPAN9-201ENST00000011898 EEF2P13639 858 aaKnown RBP13.21□□□□□ -0.29
TSPAN9-201ENST00000011898 EHHADHQ08426 723 aa13.21□□□□□ -0.29
TSPAN9-201ENST00000011898 MTF1Q14872 753 aa13.21□□□□□ -0.29
TSPAN9-201ENST00000011898 HAUS1Q96CS2 278 aa13.21□□□□□ -0.29
TSPAN9-201ENST00000011898 PPP1R9AQ9ULJ8 1098 aa13.21□□□□□ -0.29
TSPAN9-201ENST00000011898 KDM3AQ9Y4C1 1321 aa13.21□□□□□ -0.3
TSPAN9-201ENST00000011898 ARHGEF35A5YM69 484 aa13.21□□□□□ -0.3
TSPAN9-201ENST00000011898 CASQ2O14958 399 aaPredicted RBP13.21□□□□□ -0.3
TSPAN9-201ENST00000011898 MEFVO15553 781 aaPredicted RBP13.21□□□□□ -0.3
TSPAN9-201ENST00000011898 CXCR5P32302 372 aa13.21□□□□□ -0.3
TSPAN9-201ENST00000011898 PLCB3Q01970 1234 aa13.21□□□□□ -0.3
TSPAN9-201ENST00000011898 ZYXQ15942 572 aaKnown RBP13.21□□□□□ -0.3
TSPAN9-201ENST00000011898 TAOK1Q7L7X3 1001 aa13.21□□□□□ -0.3
TSPAN9-201ENST00000011898 MTFR1LQ9H019 292 aa13.21□□□□□ -0.3
TSPAN9-201ENST00000011898 KIAA1024Q9UPX6 916 aa13.21□□□□□ -0.3
TSPAN9-201ENST00000011898 ZNF711Q9Y462 761 aa13.21□□□□□ -0.3
TSPAN9-201ENST00000011898 UBR3Q6ZT12 1888 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 TRIM49BA6NDI0 452 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 ACTN4O43707 911 aaKnown RBP13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 DNAJC8O75937 253 aaPredicted RBP13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 STAT1P42224 750 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 FKBP3Q00688 224 aaKnown RBP13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 CUL3Q13618 768 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 RBM43Q6ZSC3 357 aaKnown RBP13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 MRRFQ96E11 262 aaKnown RBP13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 CFAP57Q96MR6 1250 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 PIGSQ96S52 555 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 POLD4Q9HCU8 107 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 CTTNBP2NLQ9P2B4 639 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 FBXO2Q9UK22 296 aaPredicted RBP13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 HPS5Q9UPZ3 1129 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 XDHP47989 1333 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 STX2P32856 288 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 RCAN1P53805 252 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 MTMR3Q13615 1198 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 TPH2Q8IWU9 490 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 MB21D1Q8N884 522 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 NHEJ1Q9H9Q4 299 aaPredicted RBP13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 ABHD10Q9NUJ1 306 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms