RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 WNT8BQ93098 351 aa28.43■■■□□ 2.14
TSR3-201ENST00000007390 TIFAQ96CG3 184 aa28.43■■■□□ 2.14
TSR3-201ENST00000007390 RNPEPQ9H4A4 650 aa28.43■■■□□ 2.14
TSR3-201ENST00000007390 JPH1Q9HDC5 661 aaPredicted RBP28.43■■■□□ 2.14
TSR3-201ENST00000007390 SH3GLB2Q9NR46 395 aa28.43■■■□□ 2.14
TSR3-201ENST00000007390 CPLX1O14810 134 aa28.42■■■□□ 2.14
TSR3-201ENST00000007390 ADAMTS3O15072 1205 aa28.42■■■□□ 2.14
TSR3-201ENST00000007390 PPFIA3O75145 1194 aa28.42■■■□□ 2.14
TSR3-201ENST00000007390 GPNMBQ14956 572 aa28.42■■■□□ 2.14
TSR3-201ENST00000007390 TRAF7Q6Q0C0 670 aa28.42■■■□□ 2.14
TSR3-201ENST00000007390 ATP6V0A1Q93050 837 aa28.42■■■□□ 2.14
TSR3-201ENST00000007390 CDH23Q9H251 3354 aa28.42■■■□□ 2.14
TSR3-201ENST00000007390 TRIP12Q14669 1992 aaPredicted RBP28.41■■■□□ 2.14
TSR3-201ENST00000007390 ZBBXA8MT70 800 aa28.41■■■□□ 2.14
TSR3-201ENST00000007390 CXCL10P02778 98 aa28.41■■■□□ 2.14
TSR3-201ENST00000007390 ARP10275 920 aa28.41■■■□□ 2.14
TSR3-201ENST00000007390 GNAT1P11488 350 aa28.41■■■□□ 2.14
TSR3-201ENST00000007390 RAB30Q15771 203 aa28.41■■■□□ 2.14
TSR3-201ENST00000007390 SDF4Q9BRK5 362 aa28.41■■■□□ 2.14
TSR3-201ENST00000007390 LARP6Q9BRS8 491 aaKnown RBP28.41■■■□□ 2.14
TSR3-201ENST00000007390 FTOQ9C0B1 505 aaKnown RBP eCLIP28.41■■■□□ 2.14
TSR3-201ENST00000007390 AGO4Q9HCK5 861 aaKnown RBP28.41■■■□□ 2.14
TSR3-201ENST00000007390 SLC9A2Q9UBY0 812 aa28.41■■■□□ 2.14
TSR3-201ENST00000007390 EMSYQ7Z589 1322 aa28.41■■■□□ 2.14
TSR3-201ENST00000007390 ZNF76P36508 570 aa28.4■■■□□ 2.14
TSR3-201ENST00000007390 PBX2P40425 430 aa28.4■■■□□ 2.14
TSR3-201ENST00000007390 ADAM17P78536 824 aa28.4■■■□□ 2.14
TSR3-201ENST00000007390 SSRP1Q08945 709 aaKnown RBP28.4■■■□□ 2.14
TSR3-201ENST00000007390 CPLX2Q6PUV4 134 aaKnown RBP28.4■■■□□ 2.14
TSR3-201ENST00000007390 CDX2Q99626 313 aaPredicted RBP28.4■■■□□ 2.14
TSR3-201ENST00000007390 ERAP1Q9NZ08 941 aa28.4■■■□□ 2.14
TSR3-201ENST00000007390 VPS54Q9P1Q0 977 aa28.4■■■□□ 2.14
TSR3-201ENST00000007390 FAM86B1E9PN63 330 aa28.39■■■□□ 2.14
TSR3-201ENST00000007390 TREHO43280 583 aa28.39■■■□□ 2.14
TSR3-201ENST00000007390 BAIAP3O94812 1187 aa28.39■■■□□ 2.14
TSR3-201ENST00000007390 DEXIO95424 95 aa28.39■■■□□ 2.14
TSR3-201ENST00000007390 FAM86B2P0C5J1 330 aa28.39■■■□□ 2.14
TSR3-201ENST00000007390 ITGB3BPQ13352 177 aaPredicted RBP28.39■■■□□ 2.14
TSR3-201ENST00000007390 ZNF618Q5T7W0 954 aa28.39■■■□□ 2.14
TSR3-201ENST00000007390 FAM177A1Q8N128 213 aaPredicted RBP28.39■■■□□ 2.14
TSR3-201ENST00000007390 SMARCAD1Q9H4L7 1026 aa28.39■■■□□ 2.14
TSR3-201ENST00000007390 SETD4Q9NVD3 440 aa28.39■■■□□ 2.14
TSR3-201ENST00000007390 NRCAMQ92823 1304 aa28.39■■■□□ 2.13
TSR3-201ENST00000007390 IGLV3-22A0A075B6J6 115 aa28.38■■■□□ 2.13
TSR3-201ENST00000007390 NBNO60934 754 aa28.38■■■□□ 2.13
TSR3-201ENST00000007390 CAND2O75155 1236 aa28.38■■■□□ 2.13
TSR3-201ENST00000007390 LGR5O75473 907 aa28.38■■■□□ 2.13
TSR3-201ENST00000007390 ATP2A2P16615 1042 aaKnown RBP28.38■■■□□ 2.13
TSR3-201ENST00000007390 STK3Q13188 491 aa28.38■■■□□ 2.13
TSR3-201ENST00000007390 TET1Q8NFU7 2136 aa28.38■■■□□ 2.13
TSR3-201ENST00000007390 LMBR1Q8WVP7 490 aa28.38■■■□□ 2.13
TSR3-201ENST00000007390 MSRAQ9UJ68 235 aa28.38■■■□□ 2.13
TSR3-201ENST00000007390 PLA2G4DQ86XP0 818 aa28.37■■■□□ 2.13
TSR3-201ENST00000007390 GLG1Q92896 1179 aa28.37■■■□□ 2.13
TSR3-201ENST00000007390 SLC9A7Q96T83 725 aa28.37■■■□□ 2.13
TSR3-201ENST00000007390 ZNF576Q9H609 170 aa28.37■■■□□ 2.13
TSR3-201ENST00000007390 THPOP40225 353 aa28.36■■■□□ 2.13
TSR3-201ENST00000007390 ACTR2P61160 394 aa28.36■■■□□ 2.13
TSR3-201ENST00000007390 SETQ01105 290 aaPredicted RBP28.36■■■□□ 2.13
TSR3-201ENST00000007390 MBTPS1Q14703 1052 aa28.36■■■□□ 2.13
TSR3-201ENST00000007390 ANKRD1Q15327 319 aa28.36■■■□□ 2.13
TSR3-201ENST00000007390 CNKSR3Q6P9H4 555 aa28.36■■■□□ 2.13
TSR3-201ENST00000007390 PHOSPHO2Q8TCD6 241 aa28.36■■■□□ 2.13
TSR3-201ENST00000007390 RASGRP4Q8TDF6 673 aa28.36■■■□□ 2.13
TSR3-201ENST00000007390 PCYT2Q99447 389 aa28.36■■■□□ 2.13
TSR3-201ENST00000007390 TPCN1Q9ULQ1 816 aa28.36■■■□□ 2.13
TSR3-201ENST00000007390 PFKFB2O60825 505 aa28.35■■■□□ 2.13
TSR3-201ENST00000007390 CDKL5O76039 1030 aa28.35■■■□□ 2.13
TSR3-201ENST00000007390 CIITAP33076 1130 aa28.35■■■□□ 2.13
TSR3-201ENST00000007390 NLRP5P59047 1200 aa28.35■■■□□ 2.13
TSR3-201ENST00000007390 SCRN1Q12765 414 aa28.35■■■□□ 2.13
TSR3-201ENST00000007390 AZI2Q9H6S1 392 aa28.35■■■□□ 2.13
TSR3-201ENST00000007390 PCDHA11Q9Y5I1 949 aa28.35■■■□□ 2.13
TSR3-201ENST00000007390 RSPH10B2B2RC85 870 aa28.34■■■□□ 2.13
TSR3-201ENST00000007390 ATG7O95352 703 aa28.34■■■□□ 2.13
TSR3-201ENST00000007390 RSPH10BP0C881 870 aa28.34■■■□□ 2.13
TSR3-201ENST00000007390 PPFIA1Q13136 1202 aa28.34■■■□□ 2.13
TSR3-201ENST00000007390 SLKQ9H2G2 1235 aaPredicted RBP28.34■■■□□ 2.13
TSR3-201ENST00000007390 YBX2Q9Y2T7 364 aaKnown RBP28.34■■■□□ 2.13
TSR3-201ENST00000007390 CHD7Q9P2D1 2997 aa28.33■■■□□ 2.13
TSR3-201ENST00000007390 IPO5O00410 1097 aaKnown RBP28.33■■■□□ 2.13
TSR3-201ENST00000007390 DHX15O43143 795 aaKnown RBP28.33■■■□□ 2.13
TSR3-201ENST00000007390 MARK3P27448 753 aa28.33■■■□□ 2.13
TSR3-201ENST00000007390 AK2P54819 239 aa28.33■■■□□ 2.13
TSR3-201ENST00000007390 GRIN2CQ14957 1233 aa28.33■■■□□ 2.13
TSR3-201ENST00000007390 PLPPR4Q7Z2D5 763 aa28.33■■■□□ 2.13
TSR3-201ENST00000007390 PCDHA4Q9UN74 947 aa28.33■■■□□ 2.13
TSR3-201ENST00000007390 MBLAC1A4D2B0 266 aaPredicted RBP28.32■■■□□ 2.12
TSR3-201ENST00000007390 CCNE2O96020 404 aa28.32■■■□□ 2.12
TSR3-201ENST00000007390 RABGGTBP53611 331 aa28.32■■■□□ 2.12
TSR3-201ENST00000007390 GRIK4Q16099 956 aa28.32■■■□□ 2.12
TSR3-201ENST00000007390 GALNT17Q6IS24 598 aa28.32■■■□□ 2.12
TSR3-201ENST00000007390 TAF2Q6P1X5 1199 aa28.32■■■□□ 2.12
TSR3-201ENST00000007390 RPAINQ86UA6 219 aa28.32■■■□□ 2.12
TSR3-201ENST00000007390 DAGLBQ8NCG7 672 aa28.32■■■□□ 2.12
TSR3-201ENST00000007390 MYLIPQ8WY64 445 aa28.32■■■□□ 2.12
TSR3-201ENST00000007390 C22orf23Q9BZE7 217 aa28.32■■■□□ 2.12
TSR3-201ENST00000007390 NKX2-4Q9H2Z4 354 aa28.32■■■□□ 2.12
TSR3-201ENST00000007390 STK36Q9NRP7 1315 aa28.32■■■□□ 2.12
TSR3-201ENST00000007390 IGKV6D-21A0A0A0MT36 114 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms