RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Cbx8Q9QXV1 362 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Serpinb8O08800 374 aaKnown RBP10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Kcna1P16388 495 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Lig3P97386 1015 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Spata21Q8BHW6 681 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Trex1Q91XB0 314 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Rfc4Q99J62 364 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Apobec3Q99J72 440 aaKnown RBP10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Arhgef7Q9ES28 862 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Col14a1Q80X19 1797 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Chd2E9PZM4 1827 aaKnown RBP10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Gbp1Q01514 589 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Agbl1Q09M05 972 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Esyt2Q3TZZ7 845 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Retreg2Q6NS82 541 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Hdac10Q6P3E7 666 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Atxn2lQ7TQH0 1049 aaKnown RBP10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Ankfy1Q810B6 1169 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Eif3cQ8R1B4 911 aaKnown RBP10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Acot3Q9QYR7 432 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Ppp2r3dQ9Z176 491 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Gimap9G3X987 291 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 CatspereP0DP43 985 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Pth1rP41593 591 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Atp8a1P70704 1164 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Vps41Q5KU39 853 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Elf1Q60775 612 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Mpp4Q6P7F1 635 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Smarca1Q6PGB8 1046 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Tlr11Q6R5P0 926 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 LdhdQ7TNG8 484 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Lca5Q80ST9 704 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Ptrh1Q8BW00 204 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Slc26a6Q8CIW6 758 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Znf467Q8JZL0 594 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Usp15Q8R5H1 981 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Pcdhb2Q91Y00 799 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 MlxiplQ99MZ3 864 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Mis12Q9CY25 206 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Krt7Q9DCV7 457 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Tbx18Q9EPZ6 613 aa10.26□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Ccdc152E9PX14 254 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Prl2c3P04768 224 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 OatP29758 439 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Cdc25aP48964 514 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Q3UJP5 209 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Rsad1Q5SUV1 442 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Llgl1Q80Y17 1036 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Pspc1Q8R326 523 aaKnown RBP10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Trub2Q91WG3 331 aaKnown RBP10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Krt20Q9D312 431 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Gucy1a3Q9ERL9 691 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 IdeQ9JHR7 1019 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Hyou1Q9JKR6 999 aaKnown RBP10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 JmyQ9QXM1 983 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 DccP70211 1447 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 4931408C20RikE9PWP9 1381 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Sema4dO09126 861 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Diaph2O70566 1098 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 DesP31001 469 aaKnown RBP10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Meis3P97368 378 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Gdf10P97737 476 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Pde1bQ01065 535 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Rtkn2Q14B46 604 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Prr7Q3V0I2 269 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Lrig2Q52KR2 1054 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Tmem232Q5K6N0 675 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Ccdc125Q5U465 500 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Nek5Q7TSC3 627 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Dnph1Q80VJ3 173 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Fam204aQ8C6C7 236 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Serpinb13Q8CDC0 389 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Rsrc1Q9DBU6 334 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Gm45261A0A1B0GSP6 197 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Zfand4D3Z3C6 739 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Arhgap6O54834 987 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Stim2P83093 746 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Smarcad1Q04692 1021 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Cep126Q0VBV7 1103 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Sh3gl1Q62419 368 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Scaf8Q6DID3 1268 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Rab44Q8CB87 725 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Acat1Q8QZT1 424 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Atxn7Q8R4I1 867 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Scrn1Q9CZC8 414 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Psmd10Q9Z2X2 231 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 C3P01027 1663 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Slit1Q80TR4 1531 aa10.25□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Cyp2c69E9PXC3 491 aa10.24□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Zc3h7bF8VPP8 982 aaKnown RBP10.24□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Ercc5P35689 1170 aa10.24□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Akr1b8P45377 316 aa10.24□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Cyp2c40P56657 491 aa10.24□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Gjb6P70689 261 aa10.24□□□□□ -0.77
Ldlr-202ENSMUST00000213114 MlxipQ2VPU4 917 aa10.24□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Nr1d1Q3UV55 615 aa10.24□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Tshz1Q5DTH5 1084 aa10.24□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Znf652Q5DU09 608 aa10.24□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Zbtb17Q60821 794 aa10.24□□□□□ -0.77
Ldlr-202ENSMUST00000213114 Ppp2r5eQ61151 467 aa10.24□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms