RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 AK157302I3ITR1 129 aa9.97□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Tpp1O89023 562 aa9.97□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Grin1P35438 938 aa9.97□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Yipf3Q3UDR8 347 aa9.97□□□□□ -0.81
Scn8a-213ENSMUST00000201549 NfrkbQ6PIJ4 1296 aaKnown RBP9.97□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Cep95Q8BVV7 827 aa9.97□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Mylk2Q8VCR8 613 aa9.97□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Krtap5-3Q9D226 196 aa9.97□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Isca1Q9D924 129 aa9.97□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Bfsp1A2AMT1 669 aa9.97□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Gm6583E9Q8Z1 469 aa9.97□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Pth1rP41593 591 aa9.97□□□□□ -0.81
Scn8a-213ENSMUST00000201549 GckP52792 465 aa9.97□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Mphosph8Q3TYA6 858 aaKnown RBP9.97□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Mum1l1Q4VA55 681 aa9.97□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Ccdc125Q5U465 500 aa9.97□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Nfe2l2Q60795 597 aa9.97□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Foxd1Q61345 456 aa9.97□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Znf513Q6PD29 541 aa9.97□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Hacd3Q8K2C9 362 aa9.97□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Ube2q2Q8K2Z8 378 aa9.97□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Tmem2Q5FWI3 1383 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Pdzrn4E9PUZ9 1014 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Zfp850J3QPC5 689 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Gm10488Q4KL05 212 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Adat2Q6P6J0 191 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Trim35Q8C006 501 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Ulbp1Q8HWA3 334 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Sh2b1Q91ZM2 756 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Atad3Q925I1 591 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Vps33aQ9D2N9 598 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Sdr42e1Q9D665 394 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Arhgef28P97433 1693 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Dip2aQ8BWT5 1523 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Pramel3A2AHA7 463 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Gm7903A2AWL1 463 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 AV320801A2AWL3 467 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Zyg11aA2BFL2 627 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Gm15023L7MUB4 467 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Alppl2P24823 529 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Eepd1Q3TGW2 569 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Znf827Q505G8 1078 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Gucy2fQ5SDA5 1108 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Nme8Q715T0 586 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Ttc26Q8BS45 554 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Ccdc169Q8BXX9 214 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Arhgap24Q8C4V1 747 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Sik3Q6P4S6 1311 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Ppfia4B8QI36 1187 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Ulk3Q3U3Q1 472 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Slc30a9Q5IRJ6 567 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Rcn2Q8BP92 320 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Ppm1mQ8BU27 406 aa9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 Prpf6Q91YR7 941 aaKnown RBP9.96□□□□□ -0.81
Scn8a-213ENSMUST00000201549 MlxipQ2VPU4 917 aa9.96□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Nlrp4cQ3TKR3 982 aa9.96□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Map10Q8BJS7 891 aa9.96□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Rnf8Q8VC56 488 aa9.96□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Ccdc92Q8VDN4 314 aa9.96□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Cyth1Q9QX11 398 aa9.96□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Gm10134F6ZQC6 126 aa9.96□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Xbp1O35426 267 aa9.96□□□□□ -0.82
Scn8a-213ENSMUST00000201549 CaluO35887 315 aa9.96□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Atp8b1Q148W0 1251 aa9.96□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Glra4Q61603 456 aa9.96□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Cracr2bQ80ZJ8 394 aa9.96□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Tbc1d23Q8K0F1 684 aa9.96□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Arl2bpQ9D385 163 aa9.96□□□□□ -0.82
Scn8a-213ENSMUST00000201549 A0A286YCQ6 122 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Nup62clA2AG10 272 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Slc9a5B2RXE2 898 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Rbm46P86049 533 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Sdf4Q61112 361 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Jade1Q6ZPI0 834 aaKnown RBP9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 E330017A01RikQ8BU47 192 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Vmn1r213Q8R278 384 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Pfkfb3A7UAK5 555 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Tmem232Q5K6N0 675 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Acbd5Q5XG73 508 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Ptpn14Q62130 1189 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Krt40Q6IFX3 439 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Prr18Q6PAN7 307 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Akap7Q7TN79 314 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Phf20l1Q8CCJ9 1013 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Sf3b3Q921M3 1217 aaKnown RBP9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 CenpsQ9D084 142 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 AglF8VPN4 1532 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 CopeO89079 308 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Surf1P09925 306 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 RpsaP14206 295 aaKnown RBP9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Gjb4Q02738 266 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Gm5592Q3V0A6 857 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Cog5Q8C0L8 829 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Cbwd1Q8VEH6 393 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Olfr247E9PVJ7 320 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Olfr819K7N727 320 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Atf2P16951 487 aaKnown RBP9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Ddah1Q9CWS0 285 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 3830403N18RikQ9D6C3 208 aa9.95□□□□□ -0.82
Scn8a-213ENSMUST00000201549 Klc4Q9DBS5 619 aa9.95□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms