RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Zfp51Q3U4L8 781 aa13.46□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Ppp1r7Q3UM45 361 aa13.46□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Snx30Q8CE50 437 aa13.46□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Mroh6V9GX81 722 aa13.46□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Lamc1P02468 1607 aaKnown RBP13.46□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Rtl3Q6P1Y1 553 aa13.46□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Ankrd13aQ80UP5 588 aa13.46□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Osbpl6Q8BXR9 959 aa13.46□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Card14Q99KF0 999 aa13.46□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Fam217aQ9D9W6 419 aa13.46□□□□□ -0.25
Col6a3-208ENSMUST00000188587 Lrrc23O35125 340 aa13.46□□□□□ -0.26
Col6a3-208ENSMUST00000188587 OsbpQ3B7Z2 805 aa13.46□□□□□ -0.26
Col6a3-208ENSMUST00000188587 AmphQ7TQF7 686 aa13.46□□□□□ -0.26
Col6a3-208ENSMUST00000188587 SufuQ9Z0P7 484 aa13.46□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Hecw1Q8K4P8 1604 aa13.46□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Csgalnact2Q8C1F4 542 aa13.46□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Ipo11Q8K2V6 975 aa13.46□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Defb15Q8R2I5 79 aa13.46□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Akr1c14Q91WT7 323 aa13.46□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Dbn1Q9QXS6 706 aa13.46□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Idi1P58044 227 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Ccdc84Q4VA36 332 aaKnown RBP13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 4930504O13RikQ8C5Z9 145 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 MefvQ9JJ26 767 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Wdr46Q9Z0H1 622 aaKnown RBP13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Ptch1Q61115 1434 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Tex14Q7M6U3 1450 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 DSCC1Q14AI0 399 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Haus4Q8BFT2 363 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Plcd3Q8K2J0 785 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Snap23O09044 210 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 HiraQ61666 1015 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Ahi1Q8K3E5 1047 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Vmn1r214Q8R279 367 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Cap2Q9CYT6 476 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 AF366264G3X9P9 502 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Gm10354K7N6A0 256 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Atf5O70191 283 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Clcn1Q64347 994 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Hyou1Q9JKR6 999 aaKnown RBP13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Abcc3B2RX12 1523 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Chd4Q6PDQ2 1915 aaKnown RBP13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 RcvrnP34057 202 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 YwhahP68510 246 aaKnown RBP13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Papd5Q68ED3 633 aaKnown RBP13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Znf507Q6ZPY5 941 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Olfr1494Q8VGP8 315 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Catsper1Q91ZR5 686 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Med15Q924H2 789 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Gbp10Q000W5 611 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Mettl17Q3U2U7 461 aa13.45□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Pcdhb9E9Q5G2 828 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Tsr1Q5SWD9 803 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Epn1Q80VP1 575 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Morc2bQ8C5W4 1022 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Gstt4Q9D4P7 240 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Exoc4O35382 975 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Foxred2Q3USW5 665 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Znf12Q7TSI0 686 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Ttll4Q80UG8 1193 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Ankrd23Q812A3 306 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Lyve1Q8BHC0 318 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Arhgap29Q8CGF1 1266 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 WaslQ91YD9 501 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Arhgef26D3YYY8 869 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Nccrp1G3X9C2 266 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Ext2P70428 718 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Srek1ip1Q4V9W2 153 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Tex2Q6ZPJ0 1128 aaKnown RBP13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Efcab14Q8BGQ6 484 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Psmd2Q8VDM4 908 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Rgs3Q9DC04 966 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Suclg2Q9Z2I8 433 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Gm5580A0A0N4SVP8 411 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Nfx1B1AY10 1114 aaKnown RBP13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Fgfr1op2Q9CRA9 253 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Abcc12Q80WJ6 1366 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Cd3dP04235 173 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Trim38Q5SZ99 471 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Enox1Q8BHR2 643 aaKnown RBP13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Fbxo44Q8BK26 255 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Irak4Q8R4K2 459 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Zbtb18Q9WUK6 522 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 JrklB2RRL2 523 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Serpinb3dQ6UKZ0 387 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Rcor2Q8C796 523 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Krt34Q9D646 392 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Styxl1Q9DAR2 321 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 GsdmeQ9Z2D3 512 aa13.44□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Ncapd2Q8K2Z4 1392 aa13.43□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Sdccag3A2AIW0 432 aa13.43□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Hdac4Q6NZM9 1076 aa13.43□□□□□ -0.26
Col6a3-208ENSMUST00000188587 PigsQ6PD26 555 aaKnown RBP13.43□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Tmem179Q8BHH9 233 aa13.43□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Castor1Q9CWQ8 331 aa13.43□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Aoc3O70423 765 aa13.43□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Inpp1P49442 396 aa13.43□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Nudcd3Q8R1N4 363 aa13.43□□□□□ -0.26
Col6a3-208ENSMUST00000188587 Rpap2Q8VC34 614 aa13.43□□□□□ -0.26
Col6a3-208ENSMUST00000188587 TbcbQ9D1E6 244 aa13.43□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms